co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G18970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042493: response to drug	0.00E+00
2	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
3	GO:0015995: chlorophyll biosynthetic process	5.60E-06
4	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.60E-05
5	GO:0009828: plant-type cell wall loosening	8.12E-05
6	GO:0042371: vitamin K biosynthetic process	1.18E-04
7	GO:0009627: systemic acquired resistance	1.24E-04
8	GO:0045490: pectin catabolic process	1.84E-04
9	GO:0010115: regulation of abscisic acid biosynthetic process	2.73E-04
10	GO:0001736: establishment of planar polarity	2.73E-04
11	GO:0010024: phytochromobilin biosynthetic process	2.73E-04
12	GO:0009735: response to cytokinin	3.88E-04
13	GO:0009664: plant-type cell wall organization	4.11E-04
14	GO:0006788: heme oxidation	4.52E-04
15	GO:0015714: phosphoenolpyruvate transport	4.52E-04
16	GO:0090391: granum assembly	4.52E-04
17	GO:0015979: photosynthesis	6.44E-04
18	GO:0009650: UV protection	6.47E-04
19	GO:0046739: transport of virus in multicellular host	6.47E-04
20	GO:0010239: chloroplast mRNA processing	6.47E-04
21	GO:0080170: hydrogen peroxide transmembrane transport	6.47E-04
22	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	6.47E-04
23	GO:0042335: cuticle development	7.29E-04
24	GO:0015713: phosphoglycerate transport	8.60E-04
25	GO:0030104: water homeostasis	8.60E-04
26	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	8.60E-04
27	GO:0006633: fatty acid biosynthetic process	1.23E-03
28	GO:0006561: proline biosynthetic process	1.33E-03
29	GO:0010027: thylakoid membrane organization	1.36E-03
30	GO:1901259: chloroplast rRNA processing	1.59E-03
31	GO:0017148: negative regulation of translation	1.59E-03
32	GO:0007166: cell surface receptor signaling pathway	1.63E-03
33	GO:1900057: positive regulation of leaf senescence	1.87E-03
34	GO:0009395: phospholipid catabolic process	1.87E-03
35	GO:1900056: negative regulation of leaf senescence	1.87E-03
36	GO:0010196: nonphotochemical quenching	1.87E-03
37	GO:0006353: DNA-templated transcription, termination	2.16E-03
38	GO:0006605: protein targeting	2.16E-03
39	GO:0031540: regulation of anthocyanin biosynthetic process	2.16E-03
40	GO:0008610: lipid biosynthetic process	2.16E-03
41	GO:0009826: unidimensional cell growth	2.28E-03
42	GO:0010497: plasmodesmata-mediated intercellular transport	2.46E-03
43	GO:0009245: lipid A biosynthetic process	2.78E-03
44	GO:0010205: photoinhibition	3.12E-03
45	GO:0006535: cysteine biosynthetic process from serine	3.46E-03
46	GO:0009688: abscisic acid biosynthetic process	3.46E-03
47	GO:0048829: root cap development	3.46E-03
48	GO:0006949: syncytium formation	3.46E-03
49	GO:0009750: response to fructose	3.82E-03
50	GO:0048765: root hair cell differentiation	3.82E-03
51	GO:0009773: photosynthetic electron transport in photosystem I	3.82E-03
52	GO:0016024: CDP-diacylglycerol biosynthetic process	4.19E-03
53	GO:0010102: lateral root morphogenesis	4.57E-03
54	GO:0010628: positive regulation of gene expression	4.57E-03
55	GO:0010229: inflorescence development	4.57E-03
56	GO:0009718: anthocyanin-containing compound biosynthetic process	4.57E-03
57	GO:2000012: regulation of auxin polar transport	4.57E-03
58	GO:0016042: lipid catabolic process	4.96E-03
59	GO:0010207: photosystem II assembly	4.97E-03
60	GO:0048467: gynoecium development	4.97E-03
61	GO:0010143: cutin biosynthetic process	4.97E-03
62	GO:0071732: cellular response to nitric oxide	5.37E-03
63	GO:0010030: positive regulation of seed germination	5.37E-03
64	GO:0009624: response to nematode	5.46E-03
65	GO:0006636: unsaturated fatty acid biosynthetic process	5.79E-03
66	GO:0042023: DNA endoreduplication	5.79E-03
67	GO:0051017: actin filament bundle assembly	6.22E-03
68	GO:0019344: cysteine biosynthetic process	6.22E-03
69	GO:0007017: microtubule-based process	6.66E-03
70	GO:0003333: amino acid transmembrane transport	7.11E-03
71	GO:0048511: rhythmic process	7.11E-03
72	GO:0009411: response to UV	8.05E-03
73	GO:0071369: cellular response to ethylene stimulus	8.05E-03
74	GO:0009306: protein secretion	8.53E-03
75	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.02E-03
76	GO:0080022: primary root development	9.53E-03
77	GO:0034220: ion transmembrane transport	9.53E-03
78	GO:0042631: cellular response to water deprivation	9.53E-03
79	GO:0009958: positive gravitropism	1.00E-02
80	GO:0010182: sugar mediated signaling pathway	1.00E-02
81	GO:0042752: regulation of circadian rhythm	1.06E-02
82	GO:0009416: response to light stimulus	1.07E-02
83	GO:0016032: viral process	1.22E-02
84	GO:0071281: cellular response to iron ion	1.28E-02
85	GO:0010252: auxin homeostasis	1.33E-02
86	GO:0009567: double fertilization forming a zygote and endosperm	1.33E-02
87	GO:0051607: defense response to virus	1.45E-02
88	GO:0016126: sterol biosynthetic process	1.51E-02
89	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.88E-02
90	GO:0010311: lateral root formation	1.89E-02
91	GO:0007568: aging	2.02E-02
92	GO:0006468: protein phosphorylation	2.02E-02
93	GO:0006865: amino acid transport	2.09E-02
94	GO:0030001: metal ion transport	2.37E-02
95	GO:0032259: methylation	2.57E-02
96	GO:0008283: cell proliferation	2.59E-02
97	GO:0010114: response to red light	2.59E-02
98	GO:0009926: auxin polar transport	2.59E-02
99	GO:0006855: drug transmembrane transport	2.88E-02
100	GO:0008152: metabolic process	2.96E-02
101	GO:0009733: response to auxin	3.00E-02
102	GO:0009734: auxin-activated signaling pathway	3.77E-02
103	GO:0042545: cell wall modification	4.02E-02
104	GO:0006810: transport	4.18E-02
105	GO:0009742: brassinosteroid mediated signaling pathway	4.28E-02
106	GO:0005975: carbohydrate metabolic process	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
4	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
5	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
6	GO:0016851: magnesium chelatase activity	6.29E-06
7	GO:0005528: FK506 binding	1.39E-05
8	GO:0030570: pectate lyase activity	2.60E-05
9	GO:0016788: hydrolase activity, acting on ester bonds	4.35E-05
10	GO:0045485: omega-6 fatty acid desaturase activity	1.18E-04
11	GO:0004163: diphosphomevalonate decarboxylase activity	1.18E-04
12	GO:0030794: (S)-coclaurine-N-methyltransferase activity	1.18E-04
13	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	1.18E-04
14	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.73E-04
15	GO:0090729: toxin activity	4.52E-04
16	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	4.52E-04
17	GO:0052689: carboxylic ester hydrolase activity	6.13E-04
18	GO:0043023: ribosomal large subunit binding	6.47E-04
19	GO:0004392: heme oxygenase (decyclizing) activity	8.60E-04
20	GO:0015120: phosphoglycerate transmembrane transporter activity	8.60E-04
21	GO:0010011: auxin binding	8.60E-04
22	GO:0010328: auxin influx transmembrane transporter activity	8.60E-04
23	GO:0052793: pectin acetylesterase activity	8.60E-04
24	GO:0016829: lyase activity	1.02E-03
25	GO:0016791: phosphatase activity	1.15E-03
26	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.26E-03
27	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	1.33E-03
28	GO:0031177: phosphopantetheine binding	1.33E-03
29	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	1.33E-03
30	GO:0000035: acyl binding	1.59E-03
31	GO:0004124: cysteine synthase activity	1.59E-03
32	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.16E-03
33	GO:0016491: oxidoreductase activity	2.55E-03
34	GO:0004022: alcohol dehydrogenase (NAD) activity	4.57E-03
35	GO:0004565: beta-galactosidase activity	4.57E-03
36	GO:0008080: N-acetyltransferase activity	1.00E-02
37	GO:0042802: identical protein binding	1.20E-02
38	GO:0004518: nuclease activity	1.22E-02
39	GO:0051015: actin filament binding	1.28E-02
40	GO:0005200: structural constituent of cytoskeleton	1.39E-02
41	GO:0015250: water channel activity	1.51E-02
42	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.82E-02
43	GO:0003993: acid phosphatase activity	2.23E-02
44	GO:0043621: protein self-association	2.73E-02
45	GO:0015293: symporter activity	2.81E-02
46	GO:0045330: aspartyl esterase activity	3.44E-02
47	GO:0015171: amino acid transmembrane transporter activity	3.44E-02
48	GO:0030599: pectinesterase activity	3.94E-02
49	GO:0022857: transmembrane transporter activity	3.94E-02
50	GO:0016887: ATPase activity	4.14E-02
51	GO:0016746: transferase activity, transferring acyl groups	4.19E-02
52	GO:0000166: nucleotide binding	4.74E-02
53	GO:0019843: rRNA binding	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0010007: magnesium chelatase complex	2.67E-06
2	GO:0009543: chloroplast thylakoid lumen	6.75E-06
3	GO:0005576: extracellular region	1.53E-05
4	GO:0009507: chloroplast	5.79E-05
5	GO:0005886: plasma membrane	8.09E-05
6	GO:0009515: granal stacked thylakoid	1.18E-04
7	GO:0043674: columella	1.18E-04
8	GO:0031977: thylakoid lumen	2.74E-04
9	GO:0009509: chromoplast	4.52E-04
10	GO:0009535: chloroplast thylakoid membrane	4.89E-04
11	GO:0005618: cell wall	5.12E-04
12	GO:0009570: chloroplast stroma	5.56E-04
13	GO:0009505: plant-type cell wall	5.74E-04
14	GO:0015630: microtubule cytoskeleton	6.47E-04
15	GO:0048046: apoplast	1.41E-03
16	GO:0042807: central vacuole	1.87E-03
17	GO:0009986: cell surface	1.87E-03
18	GO:0009941: chloroplast envelope	2.48E-03
19	GO:0008180: COP9 signalosome	2.78E-03
20	GO:0009534: chloroplast thylakoid	2.99E-03
21	GO:0090404: pollen tube tip	3.82E-03
22	GO:0030095: chloroplast photosystem II	4.97E-03
23	GO:0015629: actin cytoskeleton	8.05E-03
24	GO:0009523: photosystem II	1.11E-02
25	GO:0009579: thylakoid	1.34E-02
26	GO:0019005: SCF ubiquitin ligase complex	1.82E-02
27	GO:0031969: chloroplast membrane	1.82E-02
28	GO:0005768: endosome	2.28E-02
29	GO:0005856: cytoskeleton	2.81E-02
30	GO:0000502: proteasome complex	3.20E-02
31	GO:0009706: chloroplast inner membrane	4.11E-02
32	GO:0016020: membrane	4.90E-02