GO Enrichment Analysis of Co-expressed Genes with
AT4G17740
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
4 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
5 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
6 | GO:0006642: triglyceride mobilization | 0.00E+00 |
7 | GO:0042407: cristae formation | 0.00E+00 |
8 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
9 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
10 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
11 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
12 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
13 | GO:0006399: tRNA metabolic process | 0.00E+00 |
14 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
15 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
16 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
17 | GO:0032544: plastid translation | 5.37E-10 |
18 | GO:0009658: chloroplast organization | 1.31E-09 |
19 | GO:0006412: translation | 3.28E-09 |
20 | GO:0006695: cholesterol biosynthetic process | 2.91E-06 |
21 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.91E-06 |
22 | GO:0006418: tRNA aminoacylation for protein translation | 8.68E-05 |
23 | GO:0042549: photosystem II stabilization | 1.01E-04 |
24 | GO:0015979: photosynthesis | 1.29E-04 |
25 | GO:0042372: phylloquinone biosynthetic process | 1.39E-04 |
26 | GO:0043489: RNA stabilization | 2.51E-04 |
27 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 2.51E-04 |
28 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.51E-04 |
29 | GO:1904964: positive regulation of phytol biosynthetic process | 2.51E-04 |
30 | GO:0006430: lysyl-tRNA aminoacylation | 2.51E-04 |
31 | GO:0009657: plastid organization | 2.86E-04 |
32 | GO:0071482: cellular response to light stimulus | 2.86E-04 |
33 | GO:0045337: farnesyl diphosphate biosynthetic process | 3.46E-04 |
34 | GO:0033384: geranyl diphosphate biosynthetic process | 3.46E-04 |
35 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.10E-04 |
36 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.80E-04 |
37 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.53E-04 |
38 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.53E-04 |
39 | GO:0006568: tryptophan metabolic process | 5.53E-04 |
40 | GO:0043039: tRNA aminoacylation | 5.53E-04 |
41 | GO:0043085: positive regulation of catalytic activity | 5.54E-04 |
42 | GO:0006415: translational termination | 5.54E-04 |
43 | GO:0006352: DNA-templated transcription, initiation | 5.54E-04 |
44 | GO:0010020: chloroplast fission | 8.08E-04 |
45 | GO:0010207: photosystem II assembly | 8.08E-04 |
46 | GO:0019253: reductive pentose-phosphate cycle | 8.08E-04 |
47 | GO:0010581: regulation of starch biosynthetic process | 8.99E-04 |
48 | GO:0019563: glycerol catabolic process | 8.99E-04 |
49 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 8.99E-04 |
50 | GO:0032504: multicellular organism reproduction | 8.99E-04 |
51 | GO:0090351: seedling development | 9.03E-04 |
52 | GO:0006241: CTP biosynthetic process | 1.28E-03 |
53 | GO:0046902: regulation of mitochondrial membrane permeability | 1.28E-03 |
54 | GO:0006165: nucleoside diphosphate phosphorylation | 1.28E-03 |
55 | GO:0006228: UTP biosynthetic process | 1.28E-03 |
56 | GO:0010088: phloem development | 1.28E-03 |
57 | GO:0006424: glutamyl-tRNA aminoacylation | 1.28E-03 |
58 | GO:0016556: mRNA modification | 1.28E-03 |
59 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.28E-03 |
60 | GO:2001141: regulation of RNA biosynthetic process | 1.28E-03 |
61 | GO:0006085: acetyl-CoA biosynthetic process | 1.71E-03 |
62 | GO:0006183: GTP biosynthetic process | 1.71E-03 |
63 | GO:0006021: inositol biosynthetic process | 1.71E-03 |
64 | GO:0071483: cellular response to blue light | 1.71E-03 |
65 | GO:0006808: regulation of nitrogen utilization | 1.71E-03 |
66 | GO:0042254: ribosome biogenesis | 1.95E-03 |
67 | GO:0000413: protein peptidyl-prolyl isomerization | 2.02E-03 |
68 | GO:0032543: mitochondrial translation | 2.19E-03 |
69 | GO:0006564: L-serine biosynthetic process | 2.19E-03 |
70 | GO:0010236: plastoquinone biosynthetic process | 2.19E-03 |
71 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.19E-03 |
72 | GO:0031365: N-terminal protein amino acid modification | 2.19E-03 |
73 | GO:0009735: response to cytokinin | 2.56E-03 |
74 | GO:0016554: cytidine to uridine editing | 2.70E-03 |
75 | GO:0006828: manganese ion transport | 2.70E-03 |
76 | GO:0010190: cytochrome b6f complex assembly | 2.70E-03 |
77 | GO:0006014: D-ribose metabolic process | 2.70E-03 |
78 | GO:0000470: maturation of LSU-rRNA | 2.70E-03 |
79 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 3.24E-03 |
80 | GO:0009854: oxidative photosynthetic carbon pathway | 3.24E-03 |
81 | GO:0045454: cell redox homeostasis | 3.46E-03 |
82 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.82E-03 |
83 | GO:0006400: tRNA modification | 3.82E-03 |
84 | GO:0009772: photosynthetic electron transport in photosystem II | 3.82E-03 |
85 | GO:0010027: thylakoid membrane organization | 3.87E-03 |
86 | GO:0009790: embryo development | 4.29E-03 |
87 | GO:0000105: histidine biosynthetic process | 4.44E-03 |
88 | GO:0048564: photosystem I assembly | 4.44E-03 |
89 | GO:0015995: chlorophyll biosynthetic process | 4.55E-03 |
90 | GO:0006457: protein folding | 4.71E-03 |
91 | GO:0048481: plant ovule development | 5.04E-03 |
92 | GO:0018298: protein-chromophore linkage | 5.04E-03 |
93 | GO:0019430: removal of superoxide radicals | 5.08E-03 |
94 | GO:0010206: photosystem II repair | 5.75E-03 |
95 | GO:0006783: heme biosynthetic process | 5.75E-03 |
96 | GO:0009637: response to blue light | 6.39E-03 |
97 | GO:0009853: photorespiration | 6.39E-03 |
98 | GO:1900865: chloroplast RNA modification | 6.46E-03 |
99 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.46E-03 |
100 | GO:0010380: regulation of chlorophyll biosynthetic process | 6.46E-03 |
101 | GO:0043067: regulation of programmed cell death | 6.46E-03 |
102 | GO:0006535: cysteine biosynthetic process from serine | 7.20E-03 |
103 | GO:0006631: fatty acid metabolic process | 7.59E-03 |
104 | GO:0006816: calcium ion transport | 7.96E-03 |
105 | GO:0009773: photosynthetic electron transport in photosystem I | 7.96E-03 |
106 | GO:0009073: aromatic amino acid family biosynthetic process | 7.96E-03 |
107 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.96E-03 |
108 | GO:0010114: response to red light | 8.24E-03 |
109 | GO:0045037: protein import into chloroplast stroma | 8.75E-03 |
110 | GO:0006790: sulfur compound metabolic process | 8.75E-03 |
111 | GO:0006094: gluconeogenesis | 9.57E-03 |
112 | GO:0006508: proteolysis | 1.02E-02 |
113 | GO:0046854: phosphatidylinositol phosphorylation | 1.13E-02 |
114 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.15E-02 |
115 | GO:0010025: wax biosynthetic process | 1.22E-02 |
116 | GO:0000027: ribosomal large subunit assembly | 1.31E-02 |
117 | GO:0007010: cytoskeleton organization | 1.31E-02 |
118 | GO:0019344: cysteine biosynthetic process | 1.31E-02 |
119 | GO:0006096: glycolytic process | 1.32E-02 |
120 | GO:0008299: isoprenoid biosynthetic process | 1.41E-02 |
121 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.41E-02 |
122 | GO:0009793: embryo development ending in seed dormancy | 1.58E-02 |
123 | GO:0006730: one-carbon metabolic process | 1.60E-02 |
124 | GO:0006396: RNA processing | 1.64E-02 |
125 | GO:0009411: response to UV | 1.71E-02 |
126 | GO:0016117: carotenoid biosynthetic process | 1.92E-02 |
127 | GO:0006629: lipid metabolic process | 1.99E-02 |
128 | GO:0042335: cuticle development | 2.02E-02 |
129 | GO:0080022: primary root development | 2.02E-02 |
130 | GO:0006662: glycerol ether metabolic process | 2.14E-02 |
131 | GO:0010197: polar nucleus fusion | 2.14E-02 |
132 | GO:0007018: microtubule-based movement | 2.25E-02 |
133 | GO:0019252: starch biosynthetic process | 2.36E-02 |
134 | GO:0006633: fatty acid biosynthetic process | 2.50E-02 |
135 | GO:0009451: RNA modification | 2.81E-02 |
136 | GO:0042128: nitrate assimilation | 3.49E-02 |
137 | GO:0009817: defense response to fungus, incompatible interaction | 3.90E-02 |
138 | GO:0010218: response to far red light | 4.18E-02 |
139 | GO:0009631: cold acclimation | 4.32E-02 |
140 | GO:0045087: innate immune response | 4.61E-02 |
141 | GO:0016051: carbohydrate biosynthetic process | 4.61E-02 |
142 | GO:0034599: cellular response to oxidative stress | 4.76E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
2 | GO:0008887: glycerate kinase activity | 0.00E+00 |
3 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
4 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
6 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
7 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
8 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
9 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
10 | GO:0005048: signal sequence binding | 0.00E+00 |
11 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
12 | GO:0019843: rRNA binding | 1.67E-17 |
13 | GO:0003735: structural constituent of ribosome | 1.22E-09 |
14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.98E-08 |
15 | GO:0016149: translation release factor activity, codon specific | 2.38E-05 |
16 | GO:0016987: sigma factor activity | 4.33E-05 |
17 | GO:0001053: plastid sigma factor activity | 4.33E-05 |
18 | GO:0005528: FK506 binding | 7.44E-05 |
19 | GO:0051920: peroxiredoxin activity | 1.39E-04 |
20 | GO:0004812: aminoacyl-tRNA ligase activity | 1.66E-04 |
21 | GO:0016209: antioxidant activity | 2.32E-04 |
22 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.51E-04 |
23 | GO:0004831: tyrosine-tRNA ligase activity | 2.51E-04 |
24 | GO:0004655: porphobilinogen synthase activity | 2.51E-04 |
25 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.51E-04 |
26 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 2.51E-04 |
27 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 2.51E-04 |
28 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 2.51E-04 |
29 | GO:0004824: lysine-tRNA ligase activity | 2.51E-04 |
30 | GO:0004807: triose-phosphate isomerase activity | 2.51E-04 |
31 | GO:0004337: geranyltranstransferase activity | 3.46E-04 |
32 | GO:0003747: translation release factor activity | 3.46E-04 |
33 | GO:0008047: enzyme activator activity | 4.80E-04 |
34 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.53E-04 |
35 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.53E-04 |
36 | GO:0050017: L-3-cyanoalanine synthase activity | 5.53E-04 |
37 | GO:0004618: phosphoglycerate kinase activity | 5.53E-04 |
38 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.53E-04 |
39 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.53E-04 |
40 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.53E-04 |
41 | GO:0004817: cysteine-tRNA ligase activity | 5.53E-04 |
42 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 5.53E-04 |
43 | GO:0004161: dimethylallyltranstransferase activity | 5.54E-04 |
44 | GO:0008266: poly(U) RNA binding | 8.08E-04 |
45 | GO:0070330: aromatase activity | 8.99E-04 |
46 | GO:0017150: tRNA dihydrouridine synthase activity | 8.99E-04 |
47 | GO:0002161: aminoacyl-tRNA editing activity | 8.99E-04 |
48 | GO:0004148: dihydrolipoyl dehydrogenase activity | 8.99E-04 |
49 | GO:0030267: glyoxylate reductase (NADP) activity | 8.99E-04 |
50 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 8.99E-04 |
51 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 8.99E-04 |
52 | GO:0004550: nucleoside diphosphate kinase activity | 1.28E-03 |
53 | GO:0043023: ribosomal large subunit binding | 1.28E-03 |
54 | GO:0008097: 5S rRNA binding | 1.28E-03 |
55 | GO:0003878: ATP citrate synthase activity | 1.28E-03 |
56 | GO:0043495: protein anchor | 1.71E-03 |
57 | GO:0004659: prenyltransferase activity | 1.71E-03 |
58 | GO:0005319: lipid transporter activity | 1.71E-03 |
59 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.71E-03 |
60 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.71E-03 |
61 | GO:0003729: mRNA binding | 2.14E-03 |
62 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.19E-03 |
63 | GO:0018685: alkane 1-monooxygenase activity | 2.19E-03 |
64 | GO:0005471: ATP:ADP antiporter activity | 2.19E-03 |
65 | GO:0004791: thioredoxin-disulfide reductase activity | 2.34E-03 |
66 | GO:0003723: RNA binding | 2.42E-03 |
67 | GO:0016208: AMP binding | 2.70E-03 |
68 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.05E-03 |
69 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.24E-03 |
70 | GO:0102391: decanoate--CoA ligase activity | 3.24E-03 |
71 | GO:0004747: ribokinase activity | 3.24E-03 |
72 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.24E-03 |
73 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.24E-03 |
74 | GO:0004124: cysteine synthase activity | 3.24E-03 |
75 | GO:0019899: enzyme binding | 3.82E-03 |
76 | GO:0004467: long-chain fatty acid-CoA ligase activity | 3.82E-03 |
77 | GO:0016831: carboxy-lyase activity | 3.82E-03 |
78 | GO:0008235: metalloexopeptidase activity | 3.82E-03 |
79 | GO:0016168: chlorophyll binding | 4.09E-03 |
80 | GO:0004033: aldo-keto reductase (NADP) activity | 4.44E-03 |
81 | GO:0008865: fructokinase activity | 4.44E-03 |
82 | GO:0008312: 7S RNA binding | 4.44E-03 |
83 | GO:0003746: translation elongation factor activity | 6.39E-03 |
84 | GO:0005384: manganese ion transmembrane transporter activity | 6.46E-03 |
85 | GO:0047617: acyl-CoA hydrolase activity | 6.46E-03 |
86 | GO:0004177: aminopeptidase activity | 7.96E-03 |
87 | GO:0004185: serine-type carboxypeptidase activity | 8.24E-03 |
88 | GO:0000049: tRNA binding | 8.75E-03 |
89 | GO:0051537: 2 iron, 2 sulfur cluster binding | 8.92E-03 |
90 | GO:0005509: calcium ion binding | 8.93E-03 |
91 | GO:0004601: peroxidase activity | 9.25E-03 |
92 | GO:0008081: phosphoric diester hydrolase activity | 9.57E-03 |
93 | GO:0015095: magnesium ion transmembrane transporter activity | 9.57E-03 |
94 | GO:0031072: heat shock protein binding | 9.57E-03 |
95 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.11E-02 |
96 | GO:0031409: pigment binding | 1.22E-02 |
97 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.50E-02 |
98 | GO:0016740: transferase activity | 1.54E-02 |
99 | GO:0022891: substrate-specific transmembrane transporter activity | 1.71E-02 |
100 | GO:0047134: protein-disulfide reductase activity | 1.92E-02 |
101 | GO:0004519: endonuclease activity | 2.22E-02 |
102 | GO:0050662: coenzyme binding | 2.25E-02 |
103 | GO:0046872: metal ion binding | 2.66E-02 |
104 | GO:0008017: microtubule binding | 2.88E-02 |
105 | GO:0008237: metallopeptidase activity | 2.97E-02 |
106 | GO:0016597: amino acid binding | 3.10E-02 |
107 | GO:0042802: identical protein binding | 3.49E-02 |
108 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3.76E-02 |
109 | GO:0008236: serine-type peptidase activity | 3.76E-02 |
110 | GO:0004222: metalloendopeptidase activity | 4.18E-02 |
111 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 4.76E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009507: chloroplast | 7.66E-62 |
2 | GO:0009570: chloroplast stroma | 9.83E-48 |
3 | GO:0009941: chloroplast envelope | 7.27E-35 |
4 | GO:0009535: chloroplast thylakoid membrane | 5.72E-20 |
5 | GO:0009579: thylakoid | 1.21E-18 |
6 | GO:0009543: chloroplast thylakoid lumen | 1.67E-17 |
7 | GO:0031977: thylakoid lumen | 1.83E-13 |
8 | GO:0005840: ribosome | 1.71E-08 |
9 | GO:0009534: chloroplast thylakoid | 8.87E-07 |
10 | GO:0009654: photosystem II oxygen evolving complex | 2.82E-06 |
11 | GO:0019898: extrinsic component of membrane | 1.42E-05 |
12 | GO:0000311: plastid large ribosomal subunit | 2.94E-05 |
13 | GO:0000312: plastid small ribosomal subunit | 4.43E-05 |
14 | GO:0031969: chloroplast membrane | 9.40E-05 |
15 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.51E-04 |
16 | GO:0043190: ATP-binding cassette (ABC) transporter complex | 2.51E-04 |
17 | GO:0009547: plastid ribosome | 2.51E-04 |
18 | GO:0009536: plastid | 4.10E-04 |
19 | GO:0009706: chloroplast inner membrane | 4.26E-04 |
20 | GO:0080085: signal recognition particle, chloroplast targeting | 5.53E-04 |
21 | GO:0030095: chloroplast photosystem II | 8.08E-04 |
22 | GO:0042651: thylakoid membrane | 1.22E-03 |
23 | GO:0009346: citrate lyase complex | 1.28E-03 |
24 | GO:0009523: photosystem II | 2.51E-03 |
25 | GO:0022625: cytosolic large ribosomal subunit | 2.84E-03 |
26 | GO:0005762: mitochondrial large ribosomal subunit | 3.24E-03 |
27 | GO:0010319: stromule | 3.44E-03 |
28 | GO:0009533: chloroplast stromal thylakoid | 3.82E-03 |
29 | GO:0030529: intracellular ribonucleoprotein complex | 3.87E-03 |
30 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 5.08E-03 |
31 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.75E-03 |
32 | GO:0022627: cytosolic small ribosomal subunit | 7.58E-03 |
33 | GO:0046658: anchored component of plasma membrane | 7.58E-03 |
34 | GO:0016020: membrane | 7.90E-03 |
35 | GO:0030659: cytoplasmic vesicle membrane | 1.04E-02 |
36 | GO:0030076: light-harvesting complex | 1.13E-02 |
37 | GO:0005874: microtubule | 1.16E-02 |
38 | GO:0005875: microtubule associated complex | 1.22E-02 |
39 | GO:0015935: small ribosomal subunit | 1.50E-02 |
40 | GO:0009532: plastid stroma | 1.50E-02 |
41 | GO:0010287: plastoglobule | 1.89E-02 |
42 | GO:0005871: kinesin complex | 1.92E-02 |
43 | GO:0009522: photosystem I | 2.25E-02 |
44 | GO:0005759: mitochondrial matrix | 2.50E-02 |
45 | GO:0009295: nucleoid | 2.97E-02 |
46 | GO:0005778: peroxisomal membrane | 2.97E-02 |
47 | GO:0022626: cytosolic ribosome | 3.85E-02 |
48 | GO:0009707: chloroplast outer membrane | 3.90E-02 |
49 | GO:0015934: large ribosomal subunit | 4.32E-02 |