GO Enrichment Analysis of Co-expressed Genes with
AT4G17190
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0006671: phytosphingosine metabolic process | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 6 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 7 | GO:0071258: cellular response to gravity | 1.05E-07 |
| 8 | GO:0007017: microtubule-based process | 1.46E-06 |
| 9 | GO:0071482: cellular response to light stimulus | 1.76E-05 |
| 10 | GO:0006352: DNA-templated transcription, initiation | 3.96E-05 |
| 11 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 4.04E-05 |
| 12 | GO:0006426: glycyl-tRNA aminoacylation | 4.04E-05 |
| 13 | GO:0010028: xanthophyll cycle | 4.04E-05 |
| 14 | GO:0006430: lysyl-tRNA aminoacylation | 4.04E-05 |
| 15 | GO:0006568: tryptophan metabolic process | 1.00E-04 |
| 16 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.00E-04 |
| 17 | GO:0006418: tRNA aminoacylation for protein translation | 1.02E-04 |
| 18 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 1.73E-04 |
| 19 | GO:0019563: glycerol catabolic process | 1.73E-04 |
| 20 | GO:0032504: multicellular organism reproduction | 1.73E-04 |
| 21 | GO:0016556: mRNA modification | 2.55E-04 |
| 22 | GO:2001141: regulation of RNA biosynthetic process | 2.55E-04 |
| 23 | GO:0006241: CTP biosynthetic process | 2.55E-04 |
| 24 | GO:0019048: modulation by virus of host morphology or physiology | 2.55E-04 |
| 25 | GO:0006165: nucleoside diphosphate phosphorylation | 2.55E-04 |
| 26 | GO:0006228: UTP biosynthetic process | 2.55E-04 |
| 27 | GO:0031048: chromatin silencing by small RNA | 2.55E-04 |
| 28 | GO:0071483: cellular response to blue light | 3.43E-04 |
| 29 | GO:0006085: acetyl-CoA biosynthetic process | 3.43E-04 |
| 30 | GO:0006183: GTP biosynthetic process | 3.43E-04 |
| 31 | GO:0051567: histone H3-K9 methylation | 3.43E-04 |
| 32 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.37E-04 |
| 33 | GO:0048481: plant ovule development | 4.58E-04 |
| 34 | GO:0016458: gene silencing | 5.37E-04 |
| 35 | GO:0006828: manganese ion transport | 5.37E-04 |
| 36 | GO:0009793: embryo development ending in seed dormancy | 5.53E-04 |
| 37 | GO:0048280: vesicle fusion with Golgi apparatus | 6.40E-04 |
| 38 | GO:0009854: oxidative photosynthetic carbon pathway | 6.40E-04 |
| 39 | GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway | 7.49E-04 |
| 40 | GO:0045995: regulation of embryonic development | 7.49E-04 |
| 41 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 7.49E-04 |
| 42 | GO:0006783: heme biosynthetic process | 1.10E-03 |
| 43 | GO:0098656: anion transmembrane transport | 1.10E-03 |
| 44 | GO:0006096: glycolytic process | 1.14E-03 |
| 45 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.22E-03 |
| 46 | GO:0030422: production of siRNA involved in RNA interference | 1.35E-03 |
| 47 | GO:0006896: Golgi to vacuole transport | 1.35E-03 |
| 48 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.35E-03 |
| 49 | GO:0009073: aromatic amino acid family biosynthetic process | 1.49E-03 |
| 50 | GO:0006816: calcium ion transport | 1.49E-03 |
| 51 | GO:0045037: protein import into chloroplast stroma | 1.63E-03 |
| 52 | GO:0006094: gluconeogenesis | 1.77E-03 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 1.92E-03 |
| 54 | GO:0090351: seedling development | 2.07E-03 |
| 55 | GO:0006306: DNA methylation | 2.72E-03 |
| 56 | GO:0009411: response to UV | 3.06E-03 |
| 57 | GO:0042147: retrograde transport, endosome to Golgi | 3.42E-03 |
| 58 | GO:0009658: chloroplast organization | 3.57E-03 |
| 59 | GO:0080022: primary root development | 3.61E-03 |
| 60 | GO:0000226: microtubule cytoskeleton organization | 3.61E-03 |
| 61 | GO:0006342: chromatin silencing | 3.80E-03 |
| 62 | GO:0007018: microtubule-based movement | 3.99E-03 |
| 63 | GO:0006623: protein targeting to vacuole | 4.19E-03 |
| 64 | GO:0006891: intra-Golgi vesicle-mediated transport | 4.38E-03 |
| 65 | GO:0071805: potassium ion transmembrane transport | 5.21E-03 |
| 66 | GO:0051607: defense response to virus | 5.42E-03 |
| 67 | GO:0009816: defense response to bacterium, incompatible interaction | 5.86E-03 |
| 68 | GO:0006888: ER to Golgi vesicle-mediated transport | 6.31E-03 |
| 69 | GO:0015995: chlorophyll biosynthetic process | 6.31E-03 |
| 70 | GO:0006629: lipid metabolic process | 6.50E-03 |
| 71 | GO:0008152: metabolic process | 7.17E-03 |
| 72 | GO:0009637: response to blue light | 7.99E-03 |
| 73 | GO:0009853: photorespiration | 7.99E-03 |
| 74 | GO:0006631: fatty acid metabolic process | 9.01E-03 |
| 75 | GO:0042542: response to hydrogen peroxide | 9.27E-03 |
| 76 | GO:0010114: response to red light | 9.53E-03 |
| 77 | GO:0009585: red, far-red light phototransduction | 1.18E-02 |
| 78 | GO:0006813: potassium ion transport | 1.18E-02 |
| 79 | GO:0006417: regulation of translation | 1.26E-02 |
| 80 | GO:0016310: phosphorylation | 1.34E-02 |
| 81 | GO:0006457: protein folding | 1.50E-02 |
| 82 | GO:0006633: fatty acid biosynthetic process | 2.08E-02 |
| 83 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 2.87E-02 |
| 84 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.63E-02 |
| 85 | GO:0046686: response to cadmium ion | 3.65E-02 |
| 86 | GO:0015979: photosynthesis | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 3 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 4 | GO:0005048: signal sequence binding | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0001053: plastid sigma factor activity | 1.91E-06 |
| 7 | GO:0016987: sigma factor activity | 1.91E-06 |
| 8 | GO:0005200: structural constituent of cytoskeleton | 9.45E-06 |
| 9 | GO:0004820: glycine-tRNA ligase activity | 4.04E-05 |
| 10 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 4.04E-05 |
| 11 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 4.04E-05 |
| 12 | GO:0004824: lysine-tRNA ligase activity | 4.04E-05 |
| 13 | GO:0004807: triose-phosphate isomerase activity | 4.04E-05 |
| 14 | GO:0004655: porphobilinogen synthase activity | 4.04E-05 |
| 15 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.00E-04 |
| 16 | GO:0004812: aminoacyl-tRNA ligase activity | 1.65E-04 |
| 17 | GO:0017050: D-erythro-sphingosine kinase activity | 1.73E-04 |
| 18 | GO:0070330: aromatase activity | 1.73E-04 |
| 19 | GO:0002161: aminoacyl-tRNA editing activity | 1.73E-04 |
| 20 | GO:0004550: nucleoside diphosphate kinase activity | 2.55E-04 |
| 21 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 2.55E-04 |
| 22 | GO:0003878: ATP citrate synthase activity | 2.55E-04 |
| 23 | GO:0035197: siRNA binding | 2.55E-04 |
| 24 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 3.43E-04 |
| 25 | GO:0018685: alkane 1-monooxygenase activity | 4.37E-04 |
| 26 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 4.37E-04 |
| 27 | GO:0004143: diacylglycerol kinase activity | 7.49E-04 |
| 28 | GO:0016831: carboxy-lyase activity | 7.49E-04 |
| 29 | GO:0008312: 7S RNA binding | 8.61E-04 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.76E-04 |
| 31 | GO:0003951: NAD+ kinase activity | 9.77E-04 |
| 32 | GO:0005384: manganese ion transmembrane transporter activity | 1.22E-03 |
| 33 | GO:0004521: endoribonuclease activity | 1.63E-03 |
| 34 | GO:0000049: tRNA binding | 1.63E-03 |
| 35 | GO:0019843: rRNA binding | 1.70E-03 |
| 36 | GO:0008081: phosphoric diester hydrolase activity | 1.77E-03 |
| 37 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.77E-03 |
| 38 | GO:0015095: magnesium ion transmembrane transporter activity | 1.77E-03 |
| 39 | GO:0008565: protein transporter activity | 2.02E-03 |
| 40 | GO:0015079: potassium ion transmembrane transporter activity | 2.55E-03 |
| 41 | GO:0051087: chaperone binding | 2.55E-03 |
| 42 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.72E-03 |
| 43 | GO:0008514: organic anion transmembrane transporter activity | 3.24E-03 |
| 44 | GO:0005524: ATP binding | 3.30E-03 |
| 45 | GO:0005525: GTP binding | 3.31E-03 |
| 46 | GO:0003924: GTPase activity | 6.50E-03 |
| 47 | GO:0008236: serine-type peptidase activity | 6.54E-03 |
| 48 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 6.54E-03 |
| 49 | GO:0003729: mRNA binding | 7.12E-03 |
| 50 | GO:0003746: translation elongation factor activity | 7.99E-03 |
| 51 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 8.24E-03 |
| 52 | GO:0000149: SNARE binding | 8.49E-03 |
| 53 | GO:0005484: SNAP receptor activity | 9.53E-03 |
| 54 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.06E-02 |
| 55 | GO:0003777: microtubule motor activity | 1.26E-02 |
| 56 | GO:0051082: unfolded protein binding | 1.51E-02 |
| 57 | GO:0016829: lyase activity | 1.87E-02 |
| 58 | GO:0008017: microtubule binding | 2.30E-02 |
| 59 | GO:0000287: magnesium ion binding | 2.99E-02 |
| 60 | GO:0003682: chromatin binding | 3.16E-02 |
| 61 | GO:0042803: protein homodimerization activity | 4.16E-02 |
| 62 | GO:0003735: structural constituent of ribosome | 4.65E-02 |
| 63 | GO:0004519: endonuclease activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 1.07E-15 |
| 2 | GO:0009507: chloroplast | 2.58E-15 |
| 3 | GO:0009941: chloroplast envelope | 8.51E-08 |
| 4 | GO:0045298: tubulin complex | 1.28E-07 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 1.00E-04 |
| 6 | GO:0005719: nuclear euchromatin | 2.55E-04 |
| 7 | GO:0009346: citrate lyase complex | 2.55E-04 |
| 8 | GO:0009579: thylakoid | 3.38E-04 |
| 9 | GO:0005762: mitochondrial large ribosomal subunit | 6.40E-04 |
| 10 | GO:0012507: ER to Golgi transport vesicle membrane | 8.61E-04 |
| 11 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 9.77E-04 |
| 12 | GO:0009536: plastid | 1.03E-03 |
| 13 | GO:0015030: Cajal body | 1.22E-03 |
| 14 | GO:0009706: chloroplast inner membrane | 1.36E-03 |
| 15 | GO:0000311: plastid large ribosomal subunit | 1.63E-03 |
| 16 | GO:0009543: chloroplast thylakoid lumen | 1.70E-03 |
| 17 | GO:0000312: plastid small ribosomal subunit | 1.92E-03 |
| 18 | GO:0030659: cytoplasmic vesicle membrane | 1.92E-03 |
| 19 | GO:0005759: mitochondrial matrix | 2.12E-03 |
| 20 | GO:0005871: kinesin complex | 3.42E-03 |
| 21 | GO:0005874: microtubule | 4.27E-03 |
| 22 | GO:0009295: nucleoid | 5.21E-03 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 5.64E-03 |
| 24 | GO:0000325: plant-type vacuole | 7.49E-03 |
| 25 | GO:0031902: late endosome membrane | 9.01E-03 |
| 26 | GO:0031977: thylakoid lumen | 9.01E-03 |
| 27 | GO:0031201: SNARE complex | 9.01E-03 |
| 28 | GO:0005654: nucleoplasm | 1.74E-02 |
| 29 | GO:0005739: mitochondrion | 1.79E-02 |
| 30 | GO:0005623: cell | 1.80E-02 |
| 31 | GO:0005618: cell wall | 2.46E-02 |
| 32 | GO:0046658: anchored component of plasma membrane | 2.72E-02 |
| 33 | GO:0022627: cytosolic small ribosomal subunit | 2.72E-02 |
| 34 | GO:0031969: chloroplast membrane | 3.54E-02 |
| 35 | GO:0005730: nucleolus | 3.96E-02 |