co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G17100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0012502: induction of programmed cell death	0.00E+00
2	GO:0010378: temperature compensation of the circadian clock	0.00E+00
3	GO:0090279: regulation of calcium ion import	0.00E+00
4	GO:0071474: cellular hyperosmotic response	0.00E+00
5	GO:1903428: positive regulation of reactive oxygen species biosynthetic process	0.00E+00
6	GO:0009768: photosynthesis, light harvesting in photosystem I	1.00E-11
7	GO:0009409: response to cold	3.47E-10
8	GO:0018298: protein-chromophore linkage	1.44E-09
9	GO:0010218: response to far red light	1.14E-07
10	GO:0009645: response to low light intensity stimulus	3.12E-07
11	GO:0007623: circadian rhythm	3.36E-07
12	GO:0009644: response to high light intensity	4.16E-07
13	GO:0015979: photosynthesis	3.64E-06
14	GO:0009637: response to blue light	6.65E-06
15	GO:0010114: response to red light	1.14E-05
16	GO:0000380: alternative mRNA splicing, via spliceosome	1.41E-05
17	GO:0009769: photosynthesis, light harvesting in photosystem II	4.14E-05
18	GO:0032958: inositol phosphate biosynthetic process	9.69E-05
19	GO:0034472: snRNA 3'-end processing	9.69E-05
20	GO:0010496: intercellular transport	9.69E-05
21	GO:0000025: maltose catabolic process	9.69E-05
22	GO:0005983: starch catabolic process	1.68E-04
23	GO:0009414: response to water deprivation	1.92E-04
24	GO:0051170: nuclear import	2.28E-04
25	GO:0030259: lipid glycosylation	2.28E-04
26	GO:0051262: protein tetramerization	2.28E-04
27	GO:0090057: root radial pattern formation	2.28E-04
28	GO:0006598: polyamine catabolic process	3.80E-04
29	GO:0010017: red or far-red light signaling pathway	4.10E-04
30	GO:0006020: inositol metabolic process	5.46E-04
31	GO:0010601: positive regulation of auxin biosynthetic process	5.46E-04
32	GO:0010600: regulation of auxin biosynthetic process	7.26E-04
33	GO:0010508: positive regulation of autophagy	7.26E-04
34	GO:0030104: water homeostasis	7.26E-04
35	GO:0009765: photosynthesis, light harvesting	7.26E-04
36	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	7.26E-04
37	GO:0048578: positive regulation of long-day photoperiodism, flowering	9.17E-04
38	GO:0010029: regulation of seed germination	1.12E-03
39	GO:0045040: protein import into mitochondrial outer membrane	1.12E-03
40	GO:1900425: negative regulation of defense response to bacterium	1.12E-03
41	GO:0033365: protein localization to organelle	1.12E-03
42	GO:0009635: response to herbicide	1.12E-03
43	GO:0015995: chlorophyll biosynthetic process	1.24E-03
44	GO:0009735: response to cytokinin	1.31E-03
45	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	1.34E-03
46	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	1.34E-03
47	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.34E-03
48	GO:0009817: defense response to fungus, incompatible interaction	1.37E-03
49	GO:0000160: phosphorelay signal transduction system	1.44E-03
50	GO:0009631: cold acclimation	1.57E-03
51	GO:0010119: regulation of stomatal movement	1.57E-03
52	GO:1900057: positive regulation of leaf senescence	1.57E-03
53	GO:0010043: response to zinc ion	1.57E-03
54	GO:0010161: red light signaling pathway	1.57E-03
55	GO:0048437: floral organ development	1.57E-03
56	GO:0045087: innate immune response	1.72E-03
57	GO:0009415: response to water	1.81E-03
58	GO:0009704: de-etiolation	1.81E-03
59	GO:0032508: DNA duplex unwinding	1.81E-03
60	GO:0010928: regulation of auxin mediated signaling pathway	1.81E-03
61	GO:0006970: response to osmotic stress	1.88E-03
62	GO:0010099: regulation of photomorphogenesis	2.07E-03
63	GO:0009827: plant-type cell wall modification	2.07E-03
64	GO:0042542: response to hydrogen peroxide	2.12E-03
65	GO:0080167: response to karrikin	2.25E-03
66	GO:0090333: regulation of stomatal closure	2.33E-03
67	GO:0048354: mucilage biosynthetic process involved in seed coat development	2.61E-03
68	GO:0005982: starch metabolic process	2.61E-03
69	GO:0042538: hyperosmotic salinity response	2.76E-03
70	GO:0009641: shade avoidance	2.90E-03
71	GO:0009585: red, far-red light phototransduction	2.96E-03
72	GO:0009737: response to abscisic acid	3.71E-03
73	GO:0006626: protein targeting to mitochondrion	3.82E-03
74	GO:0006006: glucose metabolic process	3.82E-03
75	GO:0009718: anthocyanin-containing compound biosynthetic process	3.82E-03
76	GO:0009266: response to temperature stimulus	4.15E-03
77	GO:0006355: regulation of transcription, DNA-templated	4.51E-03
78	GO:0006406: mRNA export from nucleus	5.19E-03
79	GO:0016575: histone deacetylation	5.55E-03
80	GO:0048511: rhythmic process	5.93E-03
81	GO:0061077: chaperone-mediated protein folding	5.93E-03
82	GO:0009269: response to desiccation	5.93E-03
83	GO:0019748: secondary metabolic process	6.31E-03
84	GO:0071215: cellular response to abscisic acid stimulus	6.70E-03
85	GO:0010214: seed coat development	7.10E-03
86	GO:0008284: positive regulation of cell proliferation	7.51E-03
87	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	7.51E-03
88	GO:0010228: vegetative to reproductive phase transition of meristem	7.58E-03
89	GO:0009416: response to light stimulus	7.61E-03
90	GO:0006810: transport	7.84E-03
91	GO:0010501: RNA secondary structure unwinding	7.93E-03
92	GO:0009651: response to salt stress	8.19E-03
93	GO:0005975: carbohydrate metabolic process	8.24E-03
94	GO:0006814: sodium ion transport	8.79E-03
95	GO:0042752: regulation of circadian rhythm	8.79E-03
96	GO:0009556: microsporogenesis	9.23E-03
97	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	9.68E-03
98	GO:0055085: transmembrane transport	1.03E-02
99	GO:1901657: glycosyl compound metabolic process	1.06E-02
100	GO:0006914: autophagy	1.11E-02
101	GO:0016125: sterol metabolic process	1.11E-02
102	GO:0010286: heat acclimation	1.16E-02
103	GO:0009911: positive regulation of flower development	1.25E-02
104	GO:0007049: cell cycle	1.25E-02
105	GO:0016126: sterol biosynthetic process	1.25E-02
106	GO:0006351: transcription, DNA-templated	1.33E-02
107	GO:0006888: ER to Golgi vesicle-mediated transport	1.41E-02
108	GO:0009813: flavonoid biosynthetic process	1.57E-02
109	GO:0006811: ion transport	1.62E-02
110	GO:0045892: negative regulation of transcription, DNA-templated	1.70E-02
111	GO:0006839: mitochondrial transport	1.96E-02
112	GO:0009408: response to heat	2.06E-02
113	GO:0009640: photomorphogenesis	2.14E-02
114	GO:0051707: response to other organism	2.14E-02
115	GO:0050832: defense response to fungus	2.26E-02
116	GO:0008643: carbohydrate transport	2.27E-02
117	GO:0006812: cation transport	2.52E-02
118	GO:0046686: response to cadmium ion	3.24E-02
119	GO:0009908: flower development	3.30E-02
120	GO:0009553: embryo sac development	3.33E-02
121	GO:0009624: response to nematode	3.41E-02
122	GO:0009738: abscisic acid-activated signaling pathway	3.54E-02
123	GO:0051726: regulation of cell cycle	3.55E-02
124	GO:0035556: intracellular signal transduction	3.85E-02
125	GO:0045893: positive regulation of transcription, DNA-templated	4.19E-02
126	GO:0009845: seed germination	4.23E-02
127	GO:0007165: signal transduction	4.63E-02
128	GO:0006457: protein folding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0004567: beta-mannosidase activity	0.00E+00
2	GO:0080082: esculin beta-glucosidase activity	0.00E+00
3	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
4	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
5	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
6	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
7	GO:0090711: FMN hydrolase activity	0.00E+00
8	GO:0031409: pigment binding	4.81E-12
9	GO:0016168: chlorophyll binding	7.10E-10
10	GO:0000828: inositol hexakisphosphate kinase activity	9.69E-05
11	GO:0004134: 4-alpha-glucanotransferase activity	9.69E-05
12	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	9.69E-05
13	GO:0016906: sterol 3-beta-glucosyltransferase activity	9.69E-05
14	GO:0000829: inositol heptakisphosphate kinase activity	9.69E-05
15	GO:0005227: calcium activated cation channel activity	9.69E-05
16	GO:0080079: cellobiose glucosidase activity	9.69E-05
17	GO:0102203: brassicasterol glucosyltransferase activity	9.69E-05
18	GO:0102202: soladodine glucosyltransferase activity	9.69E-05
19	GO:0004565: beta-galactosidase activity	1.93E-04
20	GO:0016630: protochlorophyllide reductase activity	2.28E-04
21	GO:0001047: core promoter binding	2.28E-04
22	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.28E-04
23	GO:0046592: polyamine oxidase activity	3.80E-04
24	GO:0000156: phosphorelay response regulator activity	8.45E-04
25	GO:0015562: efflux transmembrane transporter activity	1.12E-03
26	GO:0000293: ferric-chelate reductase activity	1.12E-03
27	GO:0004556: alpha-amylase activity	1.12E-03
28	GO:2001070: starch binding	1.12E-03
29	GO:0004629: phospholipase C activity	1.12E-03
30	GO:0005261: cation channel activity	1.34E-03
31	GO:0004435: phosphatidylinositol phospholipase C activity	1.34E-03
32	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.37E-03
33	GO:0009881: photoreceptor activity	1.57E-03
34	GO:0004564: beta-fructofuranosidase activity	1.81E-03
35	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.07E-03
36	GO:0008308: voltage-gated anion channel activity	2.07E-03
37	GO:0000989: transcription factor activity, transcription factor binding	2.33E-03
38	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.33E-03
39	GO:0005515: protein binding	2.58E-03
40	GO:0004575: sucrose alpha-glucosidase activity	2.61E-03
41	GO:0044183: protein binding involved in protein folding	3.20E-03
42	GO:0047372: acylglycerol lipase activity	3.20E-03
43	GO:0015266: protein channel activity	3.82E-03
44	GO:0005315: inorganic phosphate transmembrane transporter activity	3.82E-03
45	GO:0008131: primary amine oxidase activity	4.15E-03
46	GO:0005215: transporter activity	5.10E-03
47	GO:0004407: histone deacetylase activity	5.19E-03
48	GO:0008324: cation transmembrane transporter activity	5.55E-03
49	GO:0051087: chaperone binding	5.55E-03
50	GO:0008514: organic anion transmembrane transporter activity	7.10E-03
51	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	8.35E-03
52	GO:0046872: metal ion binding	9.42E-03
53	GO:0102483: scopolin beta-glucosidase activity	1.41E-02
54	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.62E-02
55	GO:0003697: single-stranded DNA binding	1.79E-02
56	GO:0003993: acid phosphatase activity	1.85E-02
57	GO:0044212: transcription regulatory region DNA binding	1.86E-02
58	GO:0008422: beta-glucosidase activity	1.91E-02
59	GO:0004185: serine-type carboxypeptidase activity	2.14E-02
60	GO:0043621: protein self-association	2.27E-02
61	GO:0005198: structural molecule activity	2.33E-02
62	GO:0015293: symporter activity	2.33E-02
63	GO:0003690: double-stranded DNA binding	2.72E-02
64	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	3.05E-02
65	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.19E-02
66	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.19E-02
67	GO:0015144: carbohydrate transmembrane transporter activity	4.54E-02
68	GO:0016787: hydrolase activity	4.79E-02
69	GO:0005351: sugar:proton symporter activity	4.94E-02
70	GO:0043565: sequence-specific DNA binding	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0030076: light-harvesting complex	5.37E-10
2	GO:0009522: photosystem I	9.62E-09
3	GO:0010287: plastoglobule	1.03E-07
4	GO:0009534: chloroplast thylakoid	4.47E-07
5	GO:0009523: photosystem II	8.20E-07
6	GO:0009579: thylakoid	5.82E-06
7	GO:0009535: chloroplast thylakoid membrane	4.90E-05
8	GO:0009941: chloroplast envelope	9.55E-05
9	GO:0043036: starch grain	2.28E-04
10	GO:0005744: mitochondrial inner membrane presequence translocase complex	4.86E-04
11	GO:0009517: PSII associated light-harvesting complex II	7.26E-04
12	GO:0030127: COPII vesicle coat	1.12E-03
13	GO:0016021: integral component of membrane	1.55E-03
14	GO:0009501: amyloplast	1.81E-03
15	GO:0005777: peroxisome	1.85E-03
16	GO:0005742: mitochondrial outer membrane translocase complex	2.07E-03
17	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	2.07E-03
18	GO:0005743: mitochondrial inner membrane	3.36E-03
19	GO:0031307: integral component of mitochondrial outer membrane	3.50E-03
20	GO:0009507: chloroplast	3.76E-03
21	GO:0005938: cell cortex	3.82E-03
22	GO:0016020: membrane	5.15E-03
23	GO:0042651: thylakoid membrane	5.55E-03
24	GO:0005741: mitochondrial outer membrane	5.93E-03
25	GO:0005618: cell wall	1.09E-02
26	GO:0005667: transcription factor complex	1.36E-02
27	GO:0009707: chloroplast outer membrane	1.51E-02
28	GO:0009505: plant-type cell wall	2.47E-02
29	GO:0031966: mitochondrial membrane	2.52E-02
30	GO:0048046: apoplast	3.04E-02
31	GO:0016607: nuclear speck	3.05E-02
32	GO:0005654: nucleoplasm	3.92E-02
33	GO:0005623: cell	4.07E-02