co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071260: cellular response to mechanical stimulus	0.00E+00
2	GO:1904962: plastid to vacuole vesicle-mediated transport	0.00E+00
3	GO:0042906: xanthine transport	0.00E+00
4	GO:0009877: nodulation	0.00E+00
5	GO:0032889: regulation of vacuole fusion, non-autophagic	0.00E+00
6	GO:0010203: response to very low fluence red light stimulus	0.00E+00
7	GO:0043171: peptide catabolic process	0.00E+00
8	GO:0071211: protein targeting to vacuole involved in autophagy	0.00E+00
9	GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity	0.00E+00
10	GO:0005997: xylulose metabolic process	0.00E+00
11	GO:0071311: cellular response to acetate	0.00E+00
12	GO:0035556: intracellular signal transduction	1.52E-05
13	GO:1990641: response to iron ion starvation	2.11E-04
14	GO:0010362: negative regulation of anion channel activity by blue light	2.11E-04
15	GO:0015812: gamma-aminobutyric acid transport	2.11E-04
16	GO:0032958: inositol phosphate biosynthetic process	2.11E-04
17	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	2.11E-04
18	GO:1903648: positive regulation of chlorophyll catabolic process	2.11E-04
19	GO:0009638: phototropism	3.21E-04
20	GO:0009641: shade avoidance	3.76E-04
21	GO:0009817: defense response to fungus, incompatible interaction	4.62E-04
22	GO:0015857: uracil transport	4.71E-04
23	GO:0006101: citrate metabolic process	4.71E-04
24	GO:0035542: regulation of SNARE complex assembly	4.71E-04
25	GO:0016197: endosomal transport	4.71E-04
26	GO:0015720: allantoin transport	4.71E-04
27	GO:0010155: regulation of proton transport	4.71E-04
28	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	5.67E-04
29	GO:0042344: indole glucosinolate catabolic process	7.67E-04
30	GO:0071230: cellular response to amino acid stimulus	7.67E-04
31	GO:0017006: protein-tetrapyrrole linkage	7.67E-04
32	GO:0071705: nitrogen compound transport	7.67E-04
33	GO:0090153: regulation of sphingolipid biosynthetic process	7.67E-04
34	GO:0090630: activation of GTPase activity	7.67E-04
35	GO:0030029: actin filament-based process	7.67E-04
36	GO:0008643: carbohydrate transport	9.45E-04
37	GO:0006020: inositol metabolic process	1.09E-03
38	GO:0010601: positive regulation of auxin biosynthetic process	1.09E-03
39	GO:0009584: detection of visible light	1.09E-03
40	GO:1901332: negative regulation of lateral root development	1.09E-03
41	GO:0010483: pollen tube reception	1.45E-03
42	GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain	1.45E-03
43	GO:0010600: regulation of auxin biosynthetic process	1.45E-03
44	GO:0006970: response to osmotic stress	1.45E-03
45	GO:1990937: xylan acetylation	1.45E-03
46	GO:0006646: phosphatidylethanolamine biosynthetic process	1.45E-03
47	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.47E-03
48	GO:0009738: abscisic acid-activated signaling pathway	1.82E-03
49	GO:0030308: negative regulation of cell growth	1.85E-03
50	GO:0016926: protein desumoylation	1.85E-03
51	GO:0043097: pyrimidine nucleoside salvage	1.85E-03
52	GO:0009904: chloroplast accumulation movement	1.85E-03
53	GO:0042732: D-xylose metabolic process	2.28E-03
54	GO:0045491: xylan metabolic process	2.28E-03
55	GO:0006206: pyrimidine nucleobase metabolic process	2.28E-03
56	GO:0000741: karyogamy	2.28E-03
57	GO:0009651: response to salt stress	2.52E-03
58	GO:0019760: glucosinolate metabolic process	2.54E-03
59	GO:0007165: signal transduction	2.57E-03
60	GO:0009737: response to abscisic acid	2.70E-03
61	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.74E-03
62	GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity	2.74E-03
63	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.74E-03
64	GO:0017148: negative regulation of translation	2.74E-03
65	GO:0009903: chloroplast avoidance movement	2.74E-03
66	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.74E-03
67	GO:0010029: regulation of seed germination	3.20E-03
68	GO:0048437: floral organ development	3.23E-03
69	GO:1900057: positive regulation of leaf senescence	3.23E-03
70	GO:0010038: response to metal ion	3.23E-03
71	GO:0010044: response to aluminum ion	3.23E-03
72	GO:0010161: red light signaling pathway	3.23E-03
73	GO:0009061: anaerobic respiration	3.74E-03
74	GO:0010928: regulation of auxin mediated signaling pathway	3.74E-03
75	GO:0070413: trehalose metabolism in response to stress	3.74E-03
76	GO:0010078: maintenance of root meristem identity	3.74E-03
77	GO:0006102: isocitrate metabolic process	3.74E-03
78	GO:0007623: circadian rhythm	3.87E-03
79	GO:0018298: protein-chromophore linkage	3.94E-03
80	GO:0000160: phosphorelay signal transduction system	4.14E-03
81	GO:0010099: regulation of photomorphogenesis	4.29E-03
82	GO:0009827: plant-type cell wall modification	4.29E-03
83	GO:0001510: RNA methylation	4.29E-03
84	GO:0010468: regulation of gene expression	4.84E-03
85	GO:0010345: suberin biosynthetic process	4.85E-03
86	GO:0007338: single fertilization	4.85E-03
87	GO:0046685: response to arsenic-containing substance	4.85E-03
88	GO:0006098: pentose-phosphate shunt	4.85E-03
89	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.44E-03
90	GO:0008202: steroid metabolic process	5.44E-03
91	GO:0055062: phosphate ion homeostasis	6.06E-03
92	GO:0007064: mitotic sister chromatid cohesion	6.06E-03
93	GO:0009414: response to water deprivation	6.38E-03
94	GO:0009640: photomorphogenesis	6.43E-03
95	GO:0006816: calcium ion transport	6.69E-03
96	GO:0000209: protein polyubiquitination	6.69E-03
97	GO:0009682: induced systemic resistance	6.69E-03
98	GO:0052544: defense response by callose deposition in cell wall	6.69E-03
99	GO:0016925: protein sumoylation	7.36E-03
100	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.79E-03
101	GO:0000165: MAPK cascade	7.79E-03
102	GO:0009785: blue light signaling pathway	8.04E-03
103	GO:0009718: anthocyanin-containing compound biosynthetic process	8.04E-03
104	GO:0009723: response to ethylene	8.12E-03
105	GO:0009585: red, far-red light phototransduction	8.67E-03
106	GO:0010143: cutin biosynthetic process	8.75E-03
107	GO:0009266: response to temperature stimulus	8.75E-03
108	GO:0051603: proteolysis involved in cellular protein catabolic process	8.97E-03
109	GO:0019853: L-ascorbic acid biosynthetic process	9.48E-03
110	GO:0007033: vacuole organization	9.48E-03
111	GO:0009909: regulation of flower development	9.61E-03
112	GO:0046777: protein autophosphorylation	9.66E-03
113	GO:0010025: wax biosynthetic process	1.02E-02
114	GO:0005992: trehalose biosynthetic process	1.10E-02
115	GO:0006886: intracellular protein transport	1.16E-02
116	GO:0008299: isoprenoid biosynthetic process	1.18E-02
117	GO:0016575: histone deacetylation	1.18E-02
118	GO:0006874: cellular calcium ion homeostasis	1.18E-02
119	GO:0009695: jasmonic acid biosynthetic process	1.18E-02
120	GO:0006511: ubiquitin-dependent protein catabolic process	1.24E-02
121	GO:0009269: response to desiccation	1.26E-02
122	GO:0003333: amino acid transmembrane transport	1.26E-02
123	GO:0048511: rhythmic process	1.26E-02
124	GO:0009742: brassinosteroid mediated signaling pathway	1.31E-02
125	GO:0010017: red or far-red light signaling pathway	1.34E-02
126	GO:0030433: ubiquitin-dependent ERAD pathway	1.34E-02
127	GO:0019748: secondary metabolic process	1.34E-02
128	GO:0005975: carbohydrate metabolic process	1.37E-02
129	GO:0006012: galactose metabolic process	1.43E-02
130	GO:0009693: ethylene biosynthetic process	1.43E-02
131	GO:0010227: floral organ abscission	1.43E-02
132	GO:0045492: xylan biosynthetic process	1.52E-02
133	GO:0019722: calcium-mediated signaling	1.52E-02
134	GO:0070417: cellular response to cold	1.61E-02
135	GO:0042335: cuticle development	1.70E-02
136	GO:0080022: primary root development	1.70E-02
137	GO:0034220: ion transmembrane transport	1.70E-02
138	GO:0010051: xylem and phloem pattern formation	1.70E-02
139	GO:0006468: protein phosphorylation	1.77E-02
140	GO:0009741: response to brassinosteroid	1.79E-02
141	GO:0010197: polar nucleus fusion	1.79E-02
142	GO:0010182: sugar mediated signaling pathway	1.79E-02
143	GO:0061025: membrane fusion	1.88E-02
144	GO:0006814: sodium ion transport	1.88E-02
145	GO:0006623: protein targeting to vacuole	1.98E-02
146	GO:0009791: post-embryonic development	1.98E-02
147	GO:0008654: phospholipid biosynthetic process	1.98E-02
148	GO:0009556: microsporogenesis	1.98E-02
149	GO:0006635: fatty acid beta-oxidation	2.08E-02
150	GO:0009630: gravitropism	2.18E-02
151	GO:0010228: vegetative to reproductive phase transition of meristem	2.24E-02
152	GO:0042742: defense response to bacterium	2.25E-02
153	GO:0071281: cellular response to iron ion	2.28E-02
154	GO:1901657: glycosyl compound metabolic process	2.28E-02
155	GO:0009739: response to gibberellin	2.40E-02
156	GO:0010286: heat acclimation	2.49E-02
157	GO:0009617: response to bacterium	2.56E-02
158	GO:0001666: response to hypoxia	2.70E-02
159	GO:0009911: positive regulation of flower development	2.70E-02
160	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.81E-02
161	GO:0006355: regulation of transcription, DNA-templated	2.96E-02
162	GO:0009416: response to light stimulus	2.99E-02
163	GO:0015995: chlorophyll biosynthetic process	3.04E-02
164	GO:0048573: photoperiodism, flowering	3.04E-02
165	GO:0009834: plant-type secondary cell wall biogenesis	3.50E-02
166	GO:0010218: response to far red light	3.50E-02
167	GO:0010119: regulation of stomatal movement	3.62E-02
168	GO:0007049: cell cycle	3.70E-02
169	GO:0016051: carbohydrate biosynthetic process	3.86E-02
170	GO:0009637: response to blue light	3.86E-02
171	GO:0006099: tricarboxylic acid cycle	3.99E-02
172	GO:0055085: transmembrane transport	4.02E-02
173	GO:0016192: vesicle-mediated transport	4.32E-02
174	GO:0044550: secondary metabolite biosynthetic process	4.46E-02
175	GO:0006508: proteolysis	4.47E-02
176	GO:0042542: response to hydrogen peroxide	4.50E-02
177	GO:0009926: auxin polar transport	4.63E-02

Rank	GO Term	Adjusted P value
1	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
2	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
3	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
6	GO:0009045: xylose isomerase activity	0.00E+00
7	GO:0080082: esculin beta-glucosidase activity	0.00E+00
8	GO:0004567: beta-mannosidase activity	0.00E+00
9	GO:0015276: ligand-gated ion channel activity	0.00E+00
10	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
11	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
12	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
13	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
14	GO:0035671: enone reductase activity	2.11E-04
15	GO:0000829: inositol heptakisphosphate kinase activity	2.11E-04
16	GO:0010013: N-1-naphthylphthalamic acid binding	2.11E-04
17	GO:0080079: cellobiose glucosidase activity	2.11E-04
18	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.11E-04
19	GO:0004856: xylulokinase activity	2.11E-04
20	GO:0008066: glutamate receptor activity	2.11E-04
21	GO:0000828: inositol hexakisphosphate kinase activity	2.11E-04
22	GO:0070006: metalloaminopeptidase activity	2.11E-04
23	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.11E-04
24	GO:0008158: hedgehog receptor activity	2.11E-04
25	GO:0030275: LRR domain binding	2.11E-04
26	GO:0031516: far-red light photoreceptor activity	2.11E-04
27	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	2.11E-04
28	GO:0000989: transcription factor activity, transcription factor binding	2.70E-04
29	GO:0004672: protein kinase activity	3.42E-04
30	GO:0003994: aconitate hydratase activity	4.71E-04
31	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	4.71E-04
32	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	4.71E-04
33	GO:0015180: L-alanine transmembrane transporter activity	4.71E-04
34	GO:0005274: allantoin uptake transmembrane transporter activity	4.71E-04
35	GO:0009883: red or far-red light photoreceptor activity	4.71E-04
36	GO:0004609: phosphatidylserine decarboxylase activity	4.71E-04
37	GO:0047216: inositol 3-alpha-galactosyltransferase activity	4.71E-04
38	GO:0000976: transcription regulatory region sequence-specific DNA binding	4.99E-04
39	GO:0000155: phosphorelay sensor kinase activity	5.67E-04
40	GO:0031624: ubiquitin conjugating enzyme binding	6.38E-04
41	GO:0005483: soluble NSF attachment protein activity	7.67E-04
42	GO:0019948: SUMO activating enzyme activity	7.67E-04
43	GO:0008020: G-protein coupled photoreceptor activity	7.67E-04
44	GO:0016301: kinase activity	8.79E-04
45	GO:0004707: MAP kinase activity	1.05E-03
46	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.05E-03
47	GO:0015189: L-lysine transmembrane transporter activity	1.09E-03
48	GO:0048027: mRNA 5'-UTR binding	1.09E-03
49	GO:0015181: arginine transmembrane transporter activity	1.09E-03
50	GO:0009882: blue light photoreceptor activity	1.09E-03
51	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.09E-03
52	GO:0004300: enoyl-CoA hydratase activity	1.09E-03
53	GO:0005515: protein binding	1.35E-03
54	GO:0019905: syntaxin binding	1.45E-03
55	GO:0015210: uracil transmembrane transporter activity	1.45E-03
56	GO:0005313: L-glutamate transmembrane transporter activity	1.45E-03
57	GO:0005253: anion channel activity	1.45E-03
58	GO:0042277: peptide binding	1.45E-03
59	GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway	1.45E-03
60	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.85E-03
61	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.85E-03
62	GO:0002020: protease binding	1.85E-03
63	GO:0016929: SUMO-specific protease activity	1.85E-03
64	GO:0004629: phospholipase C activity	2.28E-03
65	GO:0019137: thioglucosidase activity	2.28E-03
66	GO:0005247: voltage-gated chloride channel activity	2.28E-03
67	GO:0004674: protein serine/threonine kinase activity	2.31E-03
68	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.66E-03
69	GO:0004849: uridine kinase activity	2.74E-03
70	GO:0070300: phosphatidic acid binding	2.74E-03
71	GO:0004435: phosphatidylinositol phospholipase C activity	2.74E-03
72	GO:0102483: scopolin beta-glucosidase activity	3.56E-03
73	GO:0004033: aldo-keto reductase (NADP) activity	3.74E-03
74	GO:0004525: ribonuclease III activity	3.74E-03
75	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.29E-03
76	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	4.29E-03
77	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.35E-03
78	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	4.85E-03
79	GO:0042802: identical protein binding	5.25E-03
80	GO:0008422: beta-glucosidase activity	5.45E-03
81	GO:0004673: protein histidine kinase activity	6.06E-03
82	GO:0004805: trehalose-phosphatase activity	6.06E-03
83	GO:0004177: aminopeptidase activity	6.69E-03
84	GO:0008270: zinc ion binding	7.60E-03
85	GO:0005215: transporter activity	7.93E-03
86	GO:0019888: protein phosphatase regulator activity	8.04E-03
87	GO:0004565: beta-galactosidase activity	8.04E-03
88	GO:0005315: inorganic phosphate transmembrane transporter activity	8.04E-03
89	GO:0005262: calcium channel activity	8.04E-03
90	GO:0004175: endopeptidase activity	8.75E-03
91	GO:0004497: monooxygenase activity	8.86E-03
92	GO:0004970: ionotropic glutamate receptor activity	9.48E-03
93	GO:0005217: intracellular ligand-gated ion channel activity	9.48E-03
94	GO:0008234: cysteine-type peptidase activity	9.61E-03
95	GO:0004407: histone deacetylase activity	1.10E-02
96	GO:0004842: ubiquitin-protein transferase activity	1.17E-02
97	GO:0022891: substrate-specific transmembrane transporter activity	1.43E-02
98	GO:0008514: organic anion transmembrane transporter activity	1.52E-02
99	GO:0043565: sequence-specific DNA binding	1.77E-02
100	GO:0030276: clathrin binding	1.79E-02
101	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.79E-02
102	GO:0015144: carbohydrate transmembrane transporter activity	1.86E-02
103	GO:0010181: FMN binding	1.88E-02
104	GO:0015297: antiporter activity	2.05E-02
105	GO:0005351: sugar:proton symporter activity	2.10E-02
106	GO:0004197: cysteine-type endopeptidase activity	2.18E-02
107	GO:0044212: transcription regulatory region DNA binding	2.25E-02
108	GO:0000156: phosphorelay response regulator activity	2.28E-02
109	GO:0016791: phosphatase activity	2.38E-02
110	GO:0008237: metallopeptidase activity	2.49E-02
111	GO:0005200: structural constituent of cytoskeleton	2.49E-02
112	GO:0005096: GTPase activator activity	3.38E-02
113	GO:0050897: cobalt ion binding	3.62E-02
114	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.22E-02
115	GO:0051539: 4 iron, 4 sulfur cluster binding	4.24E-02
116	GO:0061630: ubiquitin protein ligase activity	4.32E-02
117	GO:0019825: oxygen binding	4.62E-02
118	GO:0004185: serine-type carboxypeptidase activity	4.63E-02
119	GO:0005524: ATP binding	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0043680: filiform apparatus	0.00E+00
2	GO:0000151: ubiquitin ligase complex	4.62E-04
3	GO:0030897: HOPS complex	4.71E-04
4	GO:0000323: lytic vacuole	1.09E-03
5	GO:0009898: cytoplasmic side of plasma membrane	1.45E-03
6	GO:0032586: protein storage vacuole membrane	1.45E-03
7	GO:0016607: nuclear speck	1.59E-03
8	GO:0005851: eukaryotic translation initiation factor 2B complex	2.28E-03
9	GO:0034707: chloride channel complex	2.28E-03
10	GO:0009986: cell surface	3.23E-03
11	GO:0000307: cyclin-dependent protein kinase holoenzyme complex	4.29E-03
12	GO:0000326: protein storage vacuole	4.29E-03
13	GO:0016021: integral component of membrane	4.80E-03
14	GO:0031090: organelle membrane	4.85E-03
15	GO:0016604: nuclear body	5.44E-03
16	GO:0000159: protein phosphatase type 2A complex	6.69E-03
17	GO:0005765: lysosomal membrane	6.69E-03
18	GO:0005884: actin filament	6.69E-03
19	GO:0005773: vacuole	7.44E-03
20	GO:0005764: lysosome	8.75E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	9.48E-03
22	GO:0043234: protein complex	1.02E-02
23	GO:0005834: heterotrimeric G-protein complex	1.09E-02
24	GO:0005829: cytosol	1.56E-02
25	GO:0030136: clathrin-coated vesicle	1.61E-02
26	GO:0005737: cytoplasm	1.70E-02
27	GO:0005770: late endosome	1.79E-02
28	GO:0005634: nucleus	2.69E-02
29	GO:0005886: plasma membrane	3.24E-02
30	GO:0005783: endoplasmic reticulum	3.34E-02
31	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.64E-02
32	GO:0031201: SNARE complex	4.37E-02
33	GO:0031902: late endosome membrane	4.37E-02