GO Enrichment Analysis of Co-expressed Genes with
AT4G16880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009892: negative regulation of metabolic process | 0.00E+00 |
| 2 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 3 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 4 | GO:0009877: nodulation | 0.00E+00 |
| 5 | GO:0046677: response to antibiotic | 0.00E+00 |
| 6 | GO:0030644: cellular chloride ion homeostasis | 0.00E+00 |
| 7 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 8 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 9 | GO:1903428: positive regulation of reactive oxygen species biosynthetic process | 0.00E+00 |
| 10 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.30E-20 |
| 11 | GO:0015979: photosynthesis | 6.03E-15 |
| 12 | GO:0018298: protein-chromophore linkage | 2.89E-14 |
| 13 | GO:0009645: response to low light intensity stimulus | 1.39E-11 |
| 14 | GO:0010114: response to red light | 9.50E-10 |
| 15 | GO:0009644: response to high light intensity | 1.28E-09 |
| 16 | GO:0010218: response to far red light | 4.85E-07 |
| 17 | GO:0009637: response to blue light | 7.09E-07 |
| 18 | GO:0009769: photosynthesis, light harvesting in photosystem II | 8.22E-07 |
| 19 | GO:0015995: chlorophyll biosynthetic process | 9.99E-06 |
| 20 | GO:0009765: photosynthesis, light harvesting | 1.67E-05 |
| 21 | GO:0010196: nonphotochemical quenching | 7.70E-05 |
| 22 | GO:0009416: response to light stimulus | 1.41E-04 |
| 23 | GO:0018002: N-terminal peptidyl-glutamic acid acetylation | 1.44E-04 |
| 24 | GO:0015812: gamma-aminobutyric acid transport | 1.44E-04 |
| 25 | GO:0006475: internal protein amino acid acetylation | 1.44E-04 |
| 26 | GO:0006474: N-terminal protein amino acid acetylation | 1.44E-04 |
| 27 | GO:0017198: N-terminal peptidyl-serine acetylation | 1.44E-04 |
| 28 | GO:0006883: cellular sodium ion homeostasis | 3.29E-04 |
| 29 | GO:1902884: positive regulation of response to oxidative stress | 3.29E-04 |
| 30 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 3.29E-04 |
| 31 | GO:1902448: positive regulation of shade avoidance | 5.40E-04 |
| 32 | GO:1901562: response to paraquat | 5.40E-04 |
| 33 | GO:0035436: triose phosphate transmembrane transport | 5.40E-04 |
| 34 | GO:0009269: response to desiccation | 6.31E-04 |
| 35 | GO:0003333: amino acid transmembrane transport | 6.31E-04 |
| 36 | GO:0044211: CTP salvage | 7.73E-04 |
| 37 | GO:0009800: cinnamic acid biosynthetic process | 7.73E-04 |
| 38 | GO:0080167: response to karrikin | 7.99E-04 |
| 39 | GO:2000306: positive regulation of photomorphogenesis | 1.02E-03 |
| 40 | GO:0010600: regulation of auxin biosynthetic process | 1.02E-03 |
| 41 | GO:0015713: phosphoglycerate transport | 1.02E-03 |
| 42 | GO:0044206: UMP salvage | 1.02E-03 |
| 43 | GO:1901002: positive regulation of response to salt stress | 1.02E-03 |
| 44 | GO:0015846: polyamine transport | 1.02E-03 |
| 45 | GO:0030104: water homeostasis | 1.02E-03 |
| 46 | GO:0000003: reproduction | 1.02E-03 |
| 47 | GO:0009409: response to cold | 1.16E-03 |
| 48 | GO:0016123: xanthophyll biosynthetic process | 1.29E-03 |
| 49 | GO:0043097: pyrimidine nucleoside salvage | 1.29E-03 |
| 50 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.59E-03 |
| 51 | GO:0045962: positive regulation of development, heterochronic | 1.59E-03 |
| 52 | GO:0006206: pyrimidine nucleobase metabolic process | 1.59E-03 |
| 53 | GO:0002238: response to molecule of fungal origin | 1.59E-03 |
| 54 | GO:0009635: response to herbicide | 1.59E-03 |
| 55 | GO:0009643: photosynthetic acclimation | 1.59E-03 |
| 56 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.91E-03 |
| 57 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 1.91E-03 |
| 58 | GO:0007623: circadian rhythm | 1.95E-03 |
| 59 | GO:0010161: red light signaling pathway | 2.24E-03 |
| 60 | GO:0055114: oxidation-reduction process | 2.32E-03 |
| 61 | GO:0010928: regulation of auxin mediated signaling pathway | 2.60E-03 |
| 62 | GO:0010078: maintenance of root meristem identity | 2.60E-03 |
| 63 | GO:0009704: de-etiolation | 2.60E-03 |
| 64 | GO:0050821: protein stabilization | 2.60E-03 |
| 65 | GO:0010119: regulation of stomatal movement | 2.67E-03 |
| 66 | GO:0010099: regulation of photomorphogenesis | 2.96E-03 |
| 67 | GO:0006075: (1->3)-beta-D-glucan biosynthetic process | 2.96E-03 |
| 68 | GO:0009821: alkaloid biosynthetic process | 3.35E-03 |
| 69 | GO:0010206: photosystem II repair | 3.35E-03 |
| 70 | GO:0090333: regulation of stomatal closure | 3.35E-03 |
| 71 | GO:0030042: actin filament depolymerization | 3.76E-03 |
| 72 | GO:0008356: asymmetric cell division | 3.76E-03 |
| 73 | GO:0009723: response to ethylene | 4.07E-03 |
| 74 | GO:0009641: shade avoidance | 4.18E-03 |
| 75 | GO:0006949: syncytium formation | 4.18E-03 |
| 76 | GO:0009688: abscisic acid biosynthetic process | 4.18E-03 |
| 77 | GO:0030148: sphingolipid biosynthetic process | 4.61E-03 |
| 78 | GO:0046856: phosphatidylinositol dephosphorylation | 4.61E-03 |
| 79 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.61E-03 |
| 80 | GO:0044550: secondary metabolite biosynthetic process | 4.95E-03 |
| 81 | GO:0050826: response to freezing | 5.52E-03 |
| 82 | GO:0018107: peptidyl-threonine phosphorylation | 5.52E-03 |
| 83 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.52E-03 |
| 84 | GO:0009767: photosynthetic electron transport chain | 5.52E-03 |
| 85 | GO:0010207: photosystem II assembly | 6.00E-03 |
| 86 | GO:0007015: actin filament organization | 6.00E-03 |
| 87 | GO:0090351: seedling development | 6.50E-03 |
| 88 | GO:0006629: lipid metabolic process | 7.30E-03 |
| 89 | GO:0006351: transcription, DNA-templated | 7.61E-03 |
| 90 | GO:0048511: rhythmic process | 8.61E-03 |
| 91 | GO:0010431: seed maturation | 8.61E-03 |
| 92 | GO:0010017: red or far-red light signaling pathway | 9.17E-03 |
| 93 | GO:0009058: biosynthetic process | 9.48E-03 |
| 94 | GO:0071215: cellular response to abscisic acid stimulus | 9.75E-03 |
| 95 | GO:0045492: xylan biosynthetic process | 1.03E-02 |
| 96 | GO:0070417: cellular response to cold | 1.09E-02 |
| 97 | GO:0010182: sugar mediated signaling pathway | 1.22E-02 |
| 98 | GO:0008360: regulation of cell shape | 1.22E-02 |
| 99 | GO:0006814: sodium ion transport | 1.28E-02 |
| 100 | GO:0009735: response to cytokinin | 1.35E-02 |
| 101 | GO:0000302: response to reactive oxygen species | 1.41E-02 |
| 102 | GO:0006355: regulation of transcription, DNA-templated | 1.48E-02 |
| 103 | GO:1901657: glycosyl compound metabolic process | 1.55E-02 |
| 104 | GO:0019760: glucosinolate metabolic process | 1.62E-02 |
| 105 | GO:0009828: plant-type cell wall loosening | 1.62E-02 |
| 106 | GO:0010286: heat acclimation | 1.69E-02 |
| 107 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.91E-02 |
| 108 | GO:0009658: chloroplast organization | 1.93E-02 |
| 109 | GO:0048573: photoperiodism, flowering | 2.06E-02 |
| 110 | GO:0009651: response to salt stress | 2.09E-02 |
| 111 | GO:0016311: dephosphorylation | 2.14E-02 |
| 112 | GO:0048481: plant ovule development | 2.22E-02 |
| 113 | GO:0007568: aging | 2.46E-02 |
| 114 | GO:0006865: amino acid transport | 2.54E-02 |
| 115 | GO:0042542: response to hydrogen peroxide | 3.06E-02 |
| 116 | GO:0009737: response to abscisic acid | 3.08E-02 |
| 117 | GO:0051707: response to other organism | 3.15E-02 |
| 118 | GO:0009640: photomorphogenesis | 3.15E-02 |
| 119 | GO:0008643: carbohydrate transport | 3.33E-02 |
| 120 | GO:0032259: methylation | 3.38E-02 |
| 121 | GO:0009965: leaf morphogenesis | 3.42E-02 |
| 122 | GO:0009408: response to heat | 3.53E-02 |
| 123 | GO:0009664: plant-type cell wall organization | 3.70E-02 |
| 124 | GO:0042538: hyperosmotic salinity response | 3.70E-02 |
| 125 | GO:0006812: cation transport | 3.70E-02 |
| 126 | GO:0009585: red, far-red light phototransduction | 3.89E-02 |
| 127 | GO:0009909: regulation of flower development | 4.18E-02 |
| 128 | GO:0043086: negative regulation of catalytic activity | 4.38E-02 |
| 129 | GO:0009624: response to nematode | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
| 2 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
| 3 | GO:0019912: cyclin-dependent protein kinase activating kinase activity | 0.00E+00 |
| 4 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
| 5 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 6 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
| 8 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
| 9 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 10 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 11 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 12 | GO:0031409: pigment binding | 4.53E-18 |
| 13 | GO:0016168: chlorophyll binding | 1.00E-14 |
| 14 | GO:0046872: metal ion binding | 2.82E-06 |
| 15 | GO:0015297: antiporter activity | 2.58E-05 |
| 16 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 1.44E-04 |
| 17 | GO:0080079: cellobiose glucosidase activity | 1.44E-04 |
| 18 | GO:1990189: peptide-serine-N-acetyltransferase activity | 1.44E-04 |
| 19 | GO:1990190: peptide-glutamate-N-acetyltransferase activity | 1.44E-04 |
| 20 | GO:0052631: sphingolipid delta-8 desaturase activity | 1.44E-04 |
| 21 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 1.44E-04 |
| 22 | GO:0015185: gamma-aminobutyric acid transmembrane transporter activity | 1.44E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 3.29E-04 |
| 24 | GO:0015180: L-alanine transmembrane transporter activity | 3.29E-04 |
| 25 | GO:0080045: quercetin 3'-O-glucosyltransferase activity | 3.29E-04 |
| 26 | GO:0071917: triose-phosphate transmembrane transporter activity | 5.40E-04 |
| 27 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.40E-04 |
| 28 | GO:0015189: L-lysine transmembrane transporter activity | 7.73E-04 |
| 29 | GO:0015181: arginine transmembrane transporter activity | 7.73E-04 |
| 30 | GO:0015203: polyamine transmembrane transporter activity | 7.73E-04 |
| 31 | GO:0004845: uracil phosphoribosyltransferase activity | 1.02E-03 |
| 32 | GO:0005313: L-glutamate transmembrane transporter activity | 1.02E-03 |
| 33 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.02E-03 |
| 34 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.29E-03 |
| 35 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.29E-03 |
| 36 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.34E-03 |
| 37 | GO:0080046: quercetin 4'-O-glucosyltransferase activity | 1.59E-03 |
| 38 | GO:0004849: uridine kinase activity | 1.91E-03 |
| 39 | GO:0003843: 1,3-beta-D-glucan synthase activity | 2.96E-03 |
| 40 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 2.96E-03 |
| 41 | GO:0003993: acid phosphatase activity | 3.05E-03 |
| 42 | GO:0071949: FAD binding | 3.35E-03 |
| 43 | GO:0000989: transcription factor activity, transcription factor binding | 3.35E-03 |
| 44 | GO:0016844: strictosidine synthase activity | 3.76E-03 |
| 45 | GO:0015174: basic amino acid transmembrane transporter activity | 3.76E-03 |
| 46 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.06E-03 |
| 47 | GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity | 4.18E-03 |
| 48 | GO:0015293: symporter activity | 4.22E-03 |
| 49 | GO:0047372: acylglycerol lipase activity | 4.61E-03 |
| 50 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 5.06E-03 |
| 51 | GO:0005515: protein binding | 5.51E-03 |
| 52 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.52E-03 |
| 53 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.52E-03 |
| 54 | GO:0015171: amino acid transmembrane transporter activity | 5.59E-03 |
| 55 | GO:0004190: aspartic-type endopeptidase activity | 6.50E-03 |
| 56 | GO:0003712: transcription cofactor activity | 6.50E-03 |
| 57 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 6.99E-03 |
| 58 | GO:0004707: MAP kinase activity | 8.61E-03 |
| 59 | GO:0005506: iron ion binding | 9.72E-03 |
| 60 | GO:0008514: organic anion transmembrane transporter activity | 1.03E-02 |
| 61 | GO:0003677: DNA binding | 1.16E-02 |
| 62 | GO:0008080: N-acetyltransferase activity | 1.22E-02 |
| 63 | GO:0048038: quinone binding | 1.41E-02 |
| 64 | GO:0008168: methyltransferase activity | 1.86E-02 |
| 65 | GO:0102483: scopolin beta-glucosidase activity | 2.06E-02 |
| 66 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.38E-02 |
| 67 | GO:0004497: monooxygenase activity | 2.39E-02 |
| 68 | GO:0008422: beta-glucosidase activity | 2.80E-02 |
| 69 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 3.09E-02 |
| 70 | GO:0008270: zinc ion binding | 3.35E-02 |
| 71 | GO:0005198: structural molecule activity | 3.42E-02 |
| 72 | GO:0031625: ubiquitin protein ligase binding | 4.18E-02 |
| 73 | GO:0045735: nutrient reservoir activity | 4.38E-02 |
| 74 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.68E-02 |
| 75 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.68E-02 |
| 76 | GO:0016874: ligase activity | 4.78E-02 |
| 77 | GO:0022857: transmembrane transporter activity | 4.78E-02 |
| 78 | GO:0008289: lipid binding | 4.89E-02 |
| 79 | GO:0003779: actin binding | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009783: photosystem II antenna complex | 0.00E+00 |
| 2 | GO:0009522: photosystem I | 3.82E-18 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 8.25E-18 |
| 4 | GO:0010287: plastoglobule | 1.54E-16 |
| 5 | GO:0009534: chloroplast thylakoid | 3.54E-16 |
| 6 | GO:0009579: thylakoid | 8.04E-15 |
| 7 | GO:0009941: chloroplast envelope | 1.03E-14 |
| 8 | GO:0030076: light-harvesting complex | 1.16E-13 |
| 9 | GO:0009507: chloroplast | 5.18E-09 |
| 10 | GO:0009523: photosystem II | 5.15E-08 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 6.31E-08 |
| 12 | GO:0016021: integral component of membrane | 4.76E-06 |
| 13 | GO:0042651: thylakoid membrane | 2.58E-05 |
| 14 | GO:0016020: membrane | 3.46E-05 |
| 15 | GO:0009538: photosystem I reaction center | 9.94E-05 |
| 16 | GO:0031415: NatA complex | 3.29E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 9.85E-04 |
| 18 | GO:0009898: cytoplasmic side of plasma membrane | 1.02E-03 |
| 19 | GO:0030660: Golgi-associated vesicle membrane | 1.02E-03 |
| 20 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 1.02E-03 |
| 21 | GO:0009533: chloroplast stromal thylakoid | 2.24E-03 |
| 22 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.60E-03 |
| 23 | GO:0000148: 1,3-beta-D-glucan synthase complex | 2.96E-03 |
| 24 | GO:0031977: thylakoid lumen | 3.46E-03 |
| 25 | GO:0031969: chloroplast membrane | 4.45E-03 |
| 26 | GO:0005765: lysosomal membrane | 4.61E-03 |
| 27 | GO:0030095: chloroplast photosystem II | 6.00E-03 |
| 28 | GO:0009654: photosystem II oxygen evolving complex | 8.06E-03 |
| 29 | GO:0009543: chloroplast thylakoid lumen | 8.99E-03 |
| 30 | GO:0015629: actin cytoskeleton | 9.75E-03 |
| 31 | GO:0019898: extrinsic component of membrane | 1.35E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 2.22E-02 |
| 33 | GO:0000151: ubiquitin ligase complex | 2.22E-02 |
| 34 | GO:0009570: chloroplast stroma | 2.50E-02 |
| 35 | GO:0031966: mitochondrial membrane | 3.70E-02 |
| 36 | GO:0010008: endosome membrane | 4.48E-02 |
| 37 | GO:0016607: nuclear speck | 4.48E-02 |
| 38 | GO:0005887: integral component of plasma membrane | 4.77E-02 |
| 39 | GO:0009505: plant-type cell wall | 4.82E-02 |