co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0015690: aluminum cation transport	0.00E+00
3	GO:0010120: camalexin biosynthetic process	3.74E-09
4	GO:0071456: cellular response to hypoxia	2.28E-07
5	GO:0009617: response to bacterium	5.81E-07
6	GO:0010112: regulation of systemic acquired resistance	1.02E-06
7	GO:0009697: salicylic acid biosynthetic process	1.41E-05
8	GO:0006468: protein phosphorylation	2.36E-05
9	GO:0042742: defense response to bacterium	2.99E-05
10	GO:0009627: systemic acquired resistance	8.46E-05
11	GO:1901183: positive regulation of camalexin biosynthetic process	9.69E-05
12	GO:0051245: negative regulation of cellular defense response	9.69E-05
13	GO:0009700: indole phytoalexin biosynthetic process	9.69E-05
14	GO:0010230: alternative respiration	9.69E-05
15	GO:0010150: leaf senescence	1.17E-04
16	GO:0009682: induced systemic resistance	1.44E-04
17	GO:0002237: response to molecule of bacterial origin	2.19E-04
18	GO:0097054: L-glutamate biosynthetic process	2.28E-04
19	GO:0044419: interspecies interaction between organisms	2.28E-04
20	GO:0010272: response to silver ion	3.80E-04
21	GO:0048281: inflorescence morphogenesis	3.80E-04
22	GO:0009626: plant-type hypersensitive response	4.32E-04
23	GO:0009625: response to insect	4.47E-04
24	GO:0006537: glutamate biosynthetic process	5.46E-04
25	GO:0006612: protein targeting to membrane	5.46E-04
26	GO:0010116: positive regulation of abscisic acid biosynthetic process	5.46E-04
27	GO:0019438: aromatic compound biosynthetic process	5.46E-04
28	GO:0048544: recognition of pollen	6.54E-04
29	GO:0080142: regulation of salicylic acid biosynthetic process	7.26E-04
30	GO:1901141: regulation of lignin biosynthetic process	7.26E-04
31	GO:0019676: ammonia assimilation cycle	7.26E-04
32	GO:0010363: regulation of plant-type hypersensitive response	7.26E-04
33	GO:0010508: positive regulation of autophagy	7.26E-04
34	GO:0010252: auxin homeostasis	8.97E-04
35	GO:0034052: positive regulation of plant-type hypersensitive response	9.17E-04
36	GO:0006979: response to oxidative stress	1.00E-03
37	GO:0009759: indole glucosinolate biosynthetic process	1.12E-03
38	GO:0006561: proline biosynthetic process	1.12E-03
39	GO:0009816: defense response to bacterium, incompatible interaction	1.12E-03
40	GO:0007166: cell surface receptor signaling pathway	1.17E-03
41	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.34E-03
42	GO:0009817: defense response to fungus, incompatible interaction	1.37E-03
43	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.57E-03
44	GO:0070370: cellular heat acclimation	1.57E-03
45	GO:1902074: response to salt	1.57E-03
46	GO:1900056: negative regulation of leaf senescence	1.57E-03
47	GO:0045087: innate immune response	1.72E-03
48	GO:0009819: drought recovery	1.81E-03
49	GO:0050832: defense response to fungus	1.85E-03
50	GO:0006631: fatty acid metabolic process	2.04E-03
51	GO:0010204: defense response signaling pathway, resistance gene-independent	2.07E-03
52	GO:0043562: cellular response to nitrogen levels	2.07E-03
53	GO:0009699: phenylpropanoid biosynthetic process	2.07E-03
54	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.07E-03
55	GO:0055114: oxidation-reduction process	2.37E-03
56	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.90E-03
57	GO:0006032: chitin catabolic process	2.90E-03
58	GO:0009688: abscisic acid biosynthetic process	2.90E-03
59	GO:0043069: negative regulation of programmed cell death	2.90E-03
60	GO:0000272: polysaccharide catabolic process	3.20E-03
61	GO:0052544: defense response by callose deposition in cell wall	3.20E-03
62	GO:0032259: methylation	3.48E-03
63	GO:0009737: response to abscisic acid	3.71E-03
64	GO:0009718: anthocyanin-containing compound biosynthetic process	3.82E-03
65	GO:0034605: cellular response to heat	4.15E-03
66	GO:0010143: cutin biosynthetic process	4.15E-03
67	GO:0070588: calcium ion transmembrane transport	4.49E-03
68	GO:0010053: root epidermal cell differentiation	4.49E-03
69	GO:0010025: wax biosynthetic process	4.83E-03
70	GO:2000377: regulation of reactive oxygen species metabolic process	5.19E-03
71	GO:0005992: trehalose biosynthetic process	5.19E-03
72	GO:0009863: salicylic acid mediated signaling pathway	5.19E-03
73	GO:0016998: cell wall macromolecule catabolic process	5.93E-03
74	GO:0048278: vesicle docking	5.93E-03
75	GO:0009814: defense response, incompatible interaction	6.31E-03
76	GO:0031348: negative regulation of defense response	6.31E-03
77	GO:0006633: fatty acid biosynthetic process	6.59E-03
78	GO:0010227: floral organ abscission	6.70E-03
79	GO:0010584: pollen exine formation	7.10E-03
80	GO:0070417: cellular response to cold	7.51E-03
81	GO:0009651: response to salt stress	8.19E-03
82	GO:0008360: regulation of cell shape	8.35E-03
83	GO:0061025: membrane fusion	8.79E-03
84	GO:0009646: response to absence of light	8.79E-03
85	GO:0009851: auxin biosynthetic process	9.23E-03
86	GO:0006970: response to osmotic stress	1.21E-02
87	GO:0001666: response to hypoxia	1.25E-02
88	GO:0009615: response to virus	1.25E-02
89	GO:0006906: vesicle fusion	1.36E-02
90	GO:0080167: response to karrikin	1.39E-02
91	GO:0010200: response to chitin	1.44E-02
92	GO:0008219: cell death	1.51E-02
93	GO:0044550: secondary metabolite biosynthetic process	1.52E-02
94	GO:0009407: toxin catabolic process	1.62E-02
95	GO:0009867: jasmonic acid mediated signaling pathway	1.79E-02
96	GO:0009414: response to water deprivation	1.81E-02
97	GO:0006887: exocytosis	2.02E-02
98	GO:0009751: response to salicylic acid	2.03E-02
99	GO:0042542: response to hydrogen peroxide	2.08E-02
100	GO:0051707: response to other organism	2.14E-02
101	GO:0009733: response to auxin	2.16E-02
102	GO:0009636: response to toxic substance	2.33E-02
103	GO:0006855: drug transmembrane transport	2.39E-02
104	GO:0009846: pollen germination	2.52E-02
105	GO:0042538: hyperosmotic salinity response	2.52E-02
106	GO:0048367: shoot system development	3.05E-02
107	GO:0009620: response to fungus	3.19E-02
108	GO:0046686: response to cadmium ion	3.24E-02
109	GO:0009624: response to nematode	3.41E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
4	GO:0004674: protein serine/threonine kinase activity	3.23E-06
5	GO:0010279: indole-3-acetic acid amido synthetase activity	8.50E-06
6	GO:0016301: kinase activity	3.04E-05
7	GO:0102391: decanoate--CoA ligase activity	3.05E-05
8	GO:0004467: long-chain fatty acid-CoA ligase activity	4.14E-05
9	GO:0031957: very long-chain fatty acid-CoA ligase activity	9.69E-05
10	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	9.69E-05
11	GO:2001147: camalexin binding	9.69E-05
12	GO:0016041: glutamate synthase (ferredoxin) activity	9.69E-05
13	GO:2001227: quercitrin binding	9.69E-05
14	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.90E-05
15	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.32E-04
16	GO:0050660: flavin adenine dinucleotide binding	3.11E-04
17	GO:0005524: ATP binding	3.73E-04
18	GO:0009055: electron carrier activity	7.07E-04
19	GO:0004031: aldehyde oxidase activity	7.26E-04
20	GO:0050302: indole-3-acetaldehyde oxidase activity	7.26E-04
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	9.14E-04
22	GO:0051538: 3 iron, 4 sulfur cluster binding	9.17E-04
23	GO:0004029: aldehyde dehydrogenase (NAD) activity	1.12E-03
24	GO:0030976: thiamine pyrophosphate binding	1.12E-03
25	GO:0050897: cobalt ion binding	1.57E-03
26	GO:0043295: glutathione binding	1.57E-03
27	GO:0004143: diacylglycerol kinase activity	1.57E-03
28	GO:0004033: aldo-keto reductase (NADP) activity	1.81E-03
29	GO:0003843: 1,3-beta-D-glucan synthase activity	2.07E-03
30	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	2.61E-03
31	GO:0005516: calmodulin binding	2.79E-03
32	GO:0004568: chitinase activity	2.90E-03
33	GO:0008171: O-methyltransferase activity	2.90E-03
34	GO:0004713: protein tyrosine kinase activity	2.90E-03
35	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.11E-03
36	GO:0005388: calcium-transporting ATPase activity	3.82E-03
37	GO:0005506: iron ion binding	4.27E-03
38	GO:0008061: chitin binding	4.49E-03
39	GO:0004499: N,N-dimethylaniline monooxygenase activity	7.10E-03
40	GO:0008168: methyltransferase activity	1.08E-02
41	GO:0019825: oxygen binding	1.19E-02
42	GO:0004497: monooxygenase activity	1.39E-02
43	GO:0030247: polysaccharide binding	1.41E-02
44	GO:0004683: calmodulin-dependent protein kinase activity	1.41E-02
45	GO:0015238: drug transmembrane transporter activity	1.57E-02
46	GO:0030145: manganese ion binding	1.68E-02
47	GO:0043565: sequence-specific DNA binding	1.69E-02
48	GO:0000149: SNARE binding	1.91E-02
49	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.91E-02
50	GO:0050661: NADP binding	1.96E-02
51	GO:0004364: glutathione transferase activity	2.08E-02
52	GO:0005484: SNAP receptor activity	2.14E-02
53	GO:0051537: 2 iron, 2 sulfur cluster binding	2.27E-02
54	GO:0005198: structural molecule activity	2.33E-02
55	GO:0045735: nutrient reservoir activity	2.99E-02
56	GO:0020037: heme binding	3.30E-02
57	GO:0015035: protein disulfide oxidoreductase activity	3.48E-02
58	GO:0016746: transferase activity, transferring acyl groups	3.48E-02
59	GO:0015297: antiporter activity	4.86E-02
60	GO:0030246: carbohydrate binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.95E-07
2	GO:0005901: caveola	2.28E-04
3	GO:0000148: 1,3-beta-D-glucan synthase complex	2.07E-03
4	GO:0005829: cytosol	6.94E-03
5	GO:0009504: cell plate	9.23E-03
6	GO:0005783: endoplasmic reticulum	9.92E-03
7	GO:0000325: plant-type vacuole	1.68E-02
8	GO:0031201: SNARE complex	2.02E-02
9	GO:0043231: intracellular membrane-bounded organelle	2.27E-02
10	GO:0016021: integral component of membrane	3.01E-02
11	GO:0012505: endomembrane system	3.33E-02