co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16340

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0010442: guard cell morphogenesis	2.30E-05
4	GO:0006426: glycyl-tRNA aminoacylation	2.30E-05
5	GO:0006430: lysyl-tRNA aminoacylation	2.30E-05
6	GO:0006418: tRNA aminoacylation for protein translation	4.55E-05
7	GO:0052541: plant-type cell wall cellulose metabolic process	5.89E-05
8	GO:0010253: UDP-rhamnose biosynthetic process	1.04E-04
9	GO:0006165: nucleoside diphosphate phosphorylation	1.55E-04
10	GO:0006228: UTP biosynthetic process	1.55E-04
11	GO:0031048: chromatin silencing by small RNA	1.55E-04
12	GO:0043572: plastid fission	1.55E-04
13	GO:0006241: CTP biosynthetic process	1.55E-04
14	GO:0019048: modulation by virus of host morphology or physiology	1.55E-04
15	GO:0051567: histone H3-K9 methylation	2.12E-04
16	GO:0051322: anaphase	2.12E-04
17	GO:0009765: photosynthesis, light harvesting	2.12E-04
18	GO:0006183: GTP biosynthetic process	2.12E-04
19	GO:0048481: plant ovule development	2.25E-04
20	GO:0048359: mucilage metabolic process involved in seed coat development	2.73E-04
21	GO:0016120: carotene biosynthetic process	2.73E-04
22	GO:0016123: xanthophyll biosynthetic process	2.73E-04
23	GO:0016458: gene silencing	3.37E-04
24	GO:0006014: D-ribose metabolic process	3.37E-04
25	GO:0010067: procambium histogenesis	4.04E-04
26	GO:0045995: regulation of embryonic development	4.74E-04
27	GO:0048528: post-embryonic root development	4.74E-04
28	GO:0006813: potassium ion transport	4.95E-04
29	GO:0015780: nucleotide-sugar transport	6.98E-04
30	GO:0030422: production of siRNA involved in RNA interference	8.59E-04
31	GO:0010192: mucilage biosynthetic process	8.59E-04
32	GO:0009793: embryo development ending in seed dormancy	8.97E-04
33	GO:0010223: secondary shoot formation	1.20E-03
34	GO:0010020: chloroplast fission	1.20E-03
35	GO:0006071: glycerol metabolic process	1.39E-03
36	GO:0007010: cytoskeleton organization	1.49E-03
37	GO:0010026: trichome differentiation	1.59E-03
38	GO:0006306: DNA methylation	1.70E-03
39	GO:0080092: regulation of pollen tube growth	1.80E-03
40	GO:0009411: response to UV	1.91E-03
41	GO:0001944: vasculature development	1.91E-03
42	GO:0010089: xylem development	2.02E-03
43	GO:0010214: seed coat development	2.02E-03
44	GO:0016117: carotenoid biosynthetic process	2.13E-03
45	GO:0000413: protein peptidyl-prolyl isomerization	2.24E-03
46	GO:0000226: microtubule cytoskeleton organization	2.24E-03
47	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.27E-03
48	GO:0006342: chromatin silencing	2.36E-03
49	GO:0007018: microtubule-based movement	2.48E-03
50	GO:0019252: starch biosynthetic process	2.60E-03
51	GO:0071805: potassium ion transmembrane transport	3.22E-03
52	GO:0051607: defense response to virus	3.35E-03
53	GO:0000910: cytokinesis	3.35E-03
54	GO:0009816: defense response to bacterium, incompatible interaction	3.62E-03
55	GO:0016051: carbohydrate biosynthetic process	4.90E-03
56	GO:0042542: response to hydrogen peroxide	5.68E-03
57	GO:0008283: cell proliferation	5.84E-03
58	GO:0008643: carbohydrate transport	6.16E-03
59	GO:0009585: red, far-red light phototransduction	7.18E-03
60	GO:0006457: protein folding	7.34E-03
61	GO:0006417: regulation of translation	7.70E-03
62	GO:0006633: fatty acid biosynthetic process	1.26E-02
63	GO:0009658: chloroplast organization	1.84E-02
64	GO:0042254: ribosome biogenesis	1.86E-02
65	GO:0009860: pollen tube growth	1.94E-02
66	GO:0006468: protein phosphorylation	2.31E-02
67	GO:0015979: photosynthesis	2.35E-02
68	GO:0045454: cell redox homeostasis	2.43E-02
69	GO:0006629: lipid metabolic process	2.83E-02
70	GO:0006508: proteolysis	3.54E-02
71	GO:0009734: auxin-activated signaling pathway	3.61E-02
72	GO:0009908: flower development	3.96E-02
73	GO:0051301: cell division	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
3	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	2.30E-05
4	GO:0004820: glycine-tRNA ligase activity	2.30E-05
5	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	2.30E-05
6	GO:0004824: lysine-tRNA ligase activity	2.30E-05
7	GO:0004176: ATP-dependent peptidase activity	5.09E-05
8	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.89E-05
9	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.89E-05
10	GO:0010280: UDP-L-rhamnose synthase activity	5.89E-05
11	GO:0004812: aminoacyl-tRNA ligase activity	7.58E-05
12	GO:0008017: microtubule binding	8.89E-05
13	GO:0030267: glyoxylate reductase (NADP) activity	1.04E-04
14	GO:0002161: aminoacyl-tRNA editing activity	1.04E-04
15	GO:0008237: metallopeptidase activity	1.50E-04
16	GO:0035197: siRNA binding	1.55E-04
17	GO:0004550: nucleoside diphosphate kinase activity	1.55E-04
18	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.12E-04
19	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.73E-04
20	GO:0005524: ATP binding	3.69E-04
21	GO:0004747: ribokinase activity	4.04E-04
22	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.04E-04
23	GO:0051920: peroxiredoxin activity	4.04E-04
24	GO:0015631: tubulin binding	4.04E-04
25	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.31E-04
26	GO:0008865: fructokinase activity	5.46E-04
27	GO:0016209: antioxidant activity	5.46E-04
28	GO:0008889: glycerophosphodiester phosphodiesterase activity	6.98E-04
29	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.42E-04
30	GO:0000049: tRNA binding	1.03E-03
31	GO:0004521: endoribonuclease activity	1.03E-03
32	GO:0015079: potassium ion transmembrane transporter activity	1.59E-03
33	GO:0008324: cation transmembrane transporter activity	1.59E-03
34	GO:0008514: organic anion transmembrane transporter activity	2.02E-03
35	GO:0004672: protein kinase activity	2.82E-03
36	GO:0004222: metalloendopeptidase activity	4.46E-03
37	GO:0003746: translation elongation factor activity	4.90E-03
38	GO:0016887: ATPase activity	4.95E-03
39	GO:0003777: microtubule motor activity	7.70E-03
40	GO:0019843: rRNA binding	1.07E-02
41	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.09E-02
42	GO:0004674: protein serine/threonine kinase activity	1.31E-02
43	GO:0016301: kinase activity	1.79E-02
44	GO:0004601: peroxidase activity	1.84E-02
45	GO:0003682: chromatin binding	1.91E-02

Rank	GO Term	Adjusted P value
1	GO:0009941: chloroplast envelope	6.72E-07
2	GO:0009507: chloroplast	1.35E-06
3	GO:0009570: chloroplast stroma	2.33E-06
4	GO:0005719: nuclear euchromatin	1.55E-04
5	GO:0005874: microtubule	2.01E-04
6	GO:0072686: mitotic spindle	2.73E-04
7	GO:0009533: chloroplast stromal thylakoid	4.74E-04
8	GO:0000922: spindle pole	6.98E-04
9	GO:0015030: Cajal body	7.77E-04
10	GO:0055028: cortical microtubule	8.59E-04
11	GO:0016324: apical plasma membrane	8.59E-04
12	GO:0009543: chloroplast thylakoid lumen	8.61E-04
13	GO:0000311: plastid large ribosomal subunit	1.03E-03
14	GO:0009574: preprophase band	1.12E-03
15	GO:0005875: microtubule associated complex	1.39E-03
16	GO:0046658: anchored component of plasma membrane	1.53E-03
17	GO:0005871: kinesin complex	2.13E-03
18	GO:0030529: intracellular ribonucleoprotein complex	3.48E-03
19	GO:0005819: spindle	5.21E-03
20	GO:0031977: thylakoid lumen	5.52E-03
21	GO:0009579: thylakoid	6.78E-03
22	GO:0009534: chloroplast thylakoid	6.84E-03
23	GO:0031225: anchored component of membrane	8.84E-03
24	GO:0009706: chloroplast inner membrane	9.17E-03
25	GO:0010287: plastoglobule	1.03E-02
26	GO:0005739: mitochondrion	1.04E-02
27	GO:0005654: nucleoplasm	1.05E-02
28	GO:0009524: phragmoplast	1.11E-02
29	GO:0005759: mitochondrial matrix	1.26E-02
30	GO:0009505: plant-type cell wall	1.44E-02
31	GO:0031969: chloroplast membrane	2.14E-02
32	GO:0005886: plasma membrane	2.54E-02
33	GO:0009535: chloroplast thylakoid membrane	2.58E-02
34	GO:0009506: plasmodesma	4.50E-02