co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0043269: regulation of ion transport	0.00E+00
5	GO:1901535: regulation of DNA demethylation	0.00E+00
6	GO:0000162: tryptophan biosynthetic process	1.37E-09
7	GO:0009617: response to bacterium	1.14E-06
8	GO:0050832: defense response to fungus	6.87E-06
9	GO:0009851: auxin biosynthetic process	5.07E-05
10	GO:0010120: camalexin biosynthetic process	8.78E-05
11	GO:0009808: lignin metabolic process	8.78E-05
12	GO:0009623: response to parasitic fungus	1.14E-04
13	GO:0051245: negative regulation of cellular defense response	1.14E-04
14	GO:0010941: regulation of cell death	1.14E-04
15	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.14E-04
16	GO:0009700: indole phytoalexin biosynthetic process	1.14E-04
17	GO:0008202: steroid metabolic process	1.31E-04
18	GO:0006032: chitin catabolic process	1.55E-04
19	GO:0000272: polysaccharide catabolic process	1.82E-04
20	GO:0009682: induced systemic resistance	1.82E-04
21	GO:0052544: defense response by callose deposition in cell wall	1.82E-04
22	GO:0060919: auxin influx	2.65E-04
23	GO:0015865: purine nucleotide transport	2.65E-04
24	GO:0042343: indole glucosinolate metabolic process	3.08E-04
25	GO:0009636: response to toxic substance	3.35E-04
26	GO:0006813: potassium ion transport	4.24E-04
27	GO:1902626: assembly of large subunit precursor of preribosome	4.38E-04
28	GO:0051176: positive regulation of sulfur metabolic process	4.38E-04
29	GO:0042256: mature ribosome assembly	4.38E-04
30	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	4.38E-04
31	GO:0010498: proteasomal protein catabolic process	4.38E-04
32	GO:0016998: cell wall macromolecule catabolic process	4.64E-04
33	GO:0016226: iron-sulfur cluster assembly	5.07E-04
34	GO:0071456: cellular response to hypoxia	5.07E-04
35	GO:0009625: response to insect	5.51E-04
36	GO:0006612: protein targeting to membrane	6.29E-04
37	GO:0010255: glucose mediated signaling pathway	6.29E-04
38	GO:0010116: positive regulation of abscisic acid biosynthetic process	6.29E-04
39	GO:0019438: aromatic compound biosynthetic process	6.29E-04
40	GO:0002239: response to oomycetes	6.29E-04
41	GO:0046902: regulation of mitochondrial membrane permeability	6.29E-04
42	GO:0046686: response to cadmium ion	8.07E-04
43	GO:0000460: maturation of 5.8S rRNA	8.35E-04
44	GO:0010107: potassium ion import	8.35E-04
45	GO:0042991: transcription factor import into nucleus	8.35E-04
46	GO:0046345: abscisic acid catabolic process	8.35E-04
47	GO:0010363: regulation of plant-type hypersensitive response	8.35E-04
48	GO:0010600: regulation of auxin biosynthetic process	8.35E-04
49	GO:0002229: defense response to oomycetes	9.17E-04
50	GO:0006564: L-serine biosynthetic process	1.05E-03
51	GO:0030308: negative regulation of cell growth	1.05E-03
52	GO:0009759: indole glucosinolate biosynthetic process	1.29E-03
53	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.29E-03
54	GO:0010942: positive regulation of cell death	1.29E-03
55	GO:0000470: maturation of LSU-rRNA	1.29E-03
56	GO:0010315: auxin efflux	1.29E-03
57	GO:0042742: defense response to bacterium	1.45E-03
58	GO:0000054: ribosomal subunit export from nucleus	1.54E-03
59	GO:0009082: branched-chain amino acid biosynthetic process	1.54E-03
60	GO:0009099: valine biosynthetic process	1.54E-03
61	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	1.54E-03
62	GO:1902074: response to salt	1.81E-03
63	GO:0080027: response to herbivore	1.81E-03
64	GO:0071669: plant-type cell wall organization or biogenesis	1.81E-03
65	GO:0009407: toxin catabolic process	1.86E-03
66	GO:0016559: peroxisome fission	2.09E-03
67	GO:0009061: anaerobic respiration	2.09E-03
68	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.09E-03
69	GO:0006468: protein phosphorylation	2.26E-03
70	GO:0009097: isoleucine biosynthetic process	2.39E-03
71	GO:0044030: regulation of DNA methylation	2.39E-03
72	GO:0006002: fructose 6-phosphate metabolic process	2.39E-03
73	GO:0034765: regulation of ion transmembrane transport	2.70E-03
74	GO:0090333: regulation of stomatal closure	2.70E-03
75	GO:0010112: regulation of systemic acquired resistance	2.70E-03
76	GO:0007338: single fertilization	2.70E-03
77	GO:0006098: pentose-phosphate shunt	2.70E-03
78	GO:0009723: response to ethylene	2.71E-03
79	GO:0016573: histone acetylation	3.02E-03
80	GO:0009098: leucine biosynthetic process	3.02E-03
81	GO:0009688: abscisic acid biosynthetic process	3.36E-03
82	GO:0043069: negative regulation of programmed cell death	3.36E-03
83	GO:0071365: cellular response to auxin stimulus	4.06E-03
84	GO:0002213: defense response to insect	4.06E-03
85	GO:0055114: oxidation-reduction process	4.59E-03
86	GO:0009626: plant-type hypersensitive response	4.62E-03
87	GO:0010540: basipetal auxin transport	4.81E-03
88	GO:0006541: glutamine metabolic process	4.81E-03
89	GO:0007031: peroxisome organization	5.21E-03
90	GO:0080147: root hair cell development	6.03E-03
91	GO:0009863: salicylic acid mediated signaling pathway	6.03E-03
92	GO:0031640: killing of cells of other organism	6.48E-03
93	GO:0031408: oxylipin biosynthetic process	6.89E-03
94	GO:0098542: defense response to other organism	6.89E-03
95	GO:0048278: vesicle docking	6.89E-03
96	GO:0009814: defense response, incompatible interaction	7.34E-03
97	GO:0030433: ubiquitin-dependent ERAD pathway	7.34E-03
98	GO:0071369: cellular response to ethylene stimulus	7.79E-03
99	GO:0006012: galactose metabolic process	7.79E-03
100	GO:0071215: cellular response to abscisic acid stimulus	7.79E-03
101	GO:0010584: pollen exine formation	8.26E-03
102	GO:0042391: regulation of membrane potential	9.23E-03
103	GO:0006885: regulation of pH	9.73E-03
104	GO:0045489: pectin biosynthetic process	9.73E-03
105	GO:0006952: defense response	9.76E-03
106	GO:0061025: membrane fusion	1.02E-02
107	GO:0048825: cotyledon development	1.08E-02
108	GO:0009630: gravitropism	1.18E-02
109	GO:0009567: double fertilization forming a zygote and endosperm	1.29E-02
110	GO:0019760: glucosinolate metabolic process	1.29E-02
111	GO:0071805: potassium ion transmembrane transport	1.35E-02
112	GO:0051607: defense response to virus	1.40E-02
113	GO:0009615: response to virus	1.46E-02
114	GO:0006970: response to osmotic stress	1.51E-02
115	GO:0006906: vesicle fusion	1.58E-02
116	GO:0009627: systemic acquired resistance	1.58E-02
117	GO:0006950: response to stress	1.64E-02
118	GO:0008219: cell death	1.77E-02
119	GO:0009817: defense response to fungus, incompatible interaction	1.77E-02
120	GO:0010200: response to chitin	1.79E-02
121	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.79E-02
122	GO:0010311: lateral root formation	1.83E-02
123	GO:0048767: root hair elongation	1.83E-02
124	GO:0009737: response to abscisic acid	1.91E-02
125	GO:0010043: response to zinc ion	1.96E-02
126	GO:0009867: jasmonic acid mediated signaling pathway	2.09E-02
127	GO:0045087: innate immune response	2.09E-02
128	GO:0006869: lipid transport	2.28E-02
129	GO:0006839: mitochondrial transport	2.29E-02
130	GO:0006887: exocytosis	2.36E-02
131	GO:0032259: methylation	2.46E-02
132	GO:0006855: drug transmembrane transport	2.79E-02
133	GO:0006812: cation transport	2.94E-02
134	GO:0009846: pollen germination	2.94E-02
135	GO:0009809: lignin biosynthetic process	3.09E-02
136	GO:0009736: cytokinin-activated signaling pathway	3.09E-02
137	GO:0009873: ethylene-activated signaling pathway	3.31E-02
138	GO:0006096: glycolytic process	3.49E-02
139	GO:0009651: response to salt stress	3.72E-02
140	GO:0009620: response to fungus	3.73E-02
141	GO:0009553: embryo sac development	3.89E-02
142	GO:0009742: brassinosteroid mediated signaling pathway	4.14E-02
143	GO:0009735: response to cytokinin	4.15E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0047634: agmatine N4-coumaroyltransferase activity	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0004049: anthranilate synthase activity	2.51E-06
6	GO:0008061: chitin binding	8.90E-06
7	GO:0004834: tryptophan synthase activity	1.12E-05
8	GO:0005496: steroid binding	1.85E-05
9	GO:0008142: oxysterol binding	8.78E-05
10	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	1.14E-04
11	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	1.14E-04
12	GO:0004425: indole-3-glycerol-phosphate synthase activity	1.14E-04
13	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.14E-04
14	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.14E-04
15	GO:0004568: chitinase activity	1.55E-04
16	GO:0020037: heme binding	1.91E-04
17	GO:0047209: coniferyl-alcohol glucosyltransferase activity	2.65E-04
18	GO:0032934: sterol binding	2.65E-04
19	GO:0004364: glutathione transferase activity	2.72E-04
20	GO:0005506: iron ion binding	3.17E-04
21	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	4.38E-04
22	GO:0016595: glutamate binding	4.38E-04
23	GO:0016656: monodehydroascorbate reductase (NADH) activity	6.29E-04
24	GO:0052656: L-isoleucine transaminase activity	6.29E-04
25	GO:0043023: ribosomal large subunit binding	6.29E-04
26	GO:0052654: L-leucine transaminase activity	6.29E-04
27	GO:0052655: L-valine transaminase activity	6.29E-04
28	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	7.25E-04
29	GO:0004031: aldehyde oxidase activity	8.35E-04
30	GO:0050302: indole-3-acetaldehyde oxidase activity	8.35E-04
31	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.35E-04
32	GO:0010328: auxin influx transmembrane transporter activity	8.35E-04
33	GO:0004084: branched-chain-amino-acid transaminase activity	8.35E-04
34	GO:0005471: ATP:ADP antiporter activity	1.05E-03
35	GO:0010294: abscisic acid glucosyltransferase activity	1.05E-03
36	GO:0035252: UDP-xylosyltransferase activity	1.29E-03
37	GO:0036402: proteasome-activating ATPase activity	1.29E-03
38	GO:0008194: UDP-glycosyltransferase activity	1.50E-03
39	GO:0004656: procollagen-proline 4-dioxygenase activity	1.54E-03
40	GO:0005242: inward rectifier potassium channel activity	1.54E-03
41	GO:0051020: GTPase binding	1.54E-03
42	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.61E-03
43	GO:0004620: phospholipase activity	1.81E-03
44	GO:0003872: 6-phosphofructokinase activity	1.81E-03
45	GO:0043022: ribosome binding	2.09E-03
46	GO:0004034: aldose 1-epimerase activity	2.09E-03
47	GO:0071949: FAD binding	2.70E-03
48	GO:0030246: carbohydrate binding	3.28E-03
49	GO:0008171: O-methyltransferase activity	3.36E-03
50	GO:0008047: enzyme activator activity	3.36E-03
51	GO:0004713: protein tyrosine kinase activity	3.36E-03
52	GO:0019825: oxygen binding	3.58E-03
53	GO:0047372: acylglycerol lipase activity	3.71E-03
54	GO:0010329: auxin efflux transmembrane transporter activity	4.43E-03
55	GO:0004022: alcohol dehydrogenase (NAD) activity	4.43E-03
56	GO:0005524: ATP binding	4.48E-03
57	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.76E-03
58	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.76E-03
59	GO:0017025: TBP-class protein binding	5.21E-03
60	GO:0016301: kinase activity	5.52E-03
61	GO:0051536: iron-sulfur cluster binding	6.03E-03
62	GO:0031418: L-ascorbic acid binding	6.03E-03
63	GO:0015079: potassium ion transmembrane transporter activity	6.45E-03
64	GO:0004540: ribonuclease activity	6.89E-03
65	GO:0004674: protein serine/threonine kinase activity	7.74E-03
66	GO:0005451: monovalent cation:proton antiporter activity	9.23E-03
67	GO:0030551: cyclic nucleotide binding	9.23E-03
68	GO:0010181: FMN binding	1.02E-02
69	GO:0016853: isomerase activity	1.02E-02
70	GO:0015299: solute:proton antiporter activity	1.02E-02
71	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.15E-02
72	GO:0042802: identical protein binding	1.15E-02
73	GO:0015385: sodium:proton antiporter activity	1.24E-02
74	GO:0008168: methyltransferase activity	1.34E-02
75	GO:0050660: flavin adenine dinucleotide binding	1.62E-02
76	GO:0004497: monooxygenase activity	1.74E-02
77	GO:0015238: drug transmembrane transporter activity	1.83E-02
78	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.96E-02
79	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.09E-02
80	GO:0003746: translation elongation factor activity	2.09E-02
81	GO:0042803: protein homodimerization activity	2.18E-02
82	GO:0000149: SNARE binding	2.22E-02
83	GO:0051539: 4 iron, 4 sulfur cluster binding	2.29E-02
84	GO:0005484: SNAP receptor activity	2.50E-02
85	GO:0051537: 2 iron, 2 sulfur cluster binding	2.65E-02
86	GO:0016298: lipase activity	3.17E-02
87	GO:0045735: nutrient reservoir activity	3.49E-02
88	GO:0016757: transferase activity, transferring glycosyl groups	3.80E-02
89	GO:0004672: protein kinase activity	3.95E-02
90	GO:0000166: nucleotide binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	2.14E-06
2	GO:0016021: integral component of membrane	1.60E-05
3	GO:0005783: endoplasmic reticulum	1.68E-04
4	GO:0005950: anthranilate synthase complex	2.65E-04
5	GO:0005853: eukaryotic translation elongation factor 1 complex	4.38E-04
6	GO:0005829: cytosol	5.62E-04
7	GO:0005945: 6-phosphofructokinase complex	1.05E-03
8	GO:0031597: cytosolic proteasome complex	1.54E-03
9	GO:0031595: nuclear proteasome complex	1.81E-03
10	GO:0030687: preribosome, large subunit precursor	1.81E-03
11	GO:0016020: membrane	2.08E-03
12	GO:0005779: integral component of peroxisomal membrane	2.39E-03
13	GO:0008540: proteasome regulatory particle, base subcomplex	3.02E-03
14	GO:0009570: chloroplast stroma	4.62E-03
15	GO:0012505: endomembrane system	5.06E-03
16	GO:0043231: intracellular membrane-bounded organelle	5.49E-03
17	GO:0005778: peroxisomal membrane	1.35E-02
18	GO:0000325: plant-type vacuole	1.96E-02
19	GO:0031201: SNARE complex	2.36E-02
20	GO:0000502: proteasome complex	3.09E-02
21	GO:0010008: endosome membrane	3.57E-02
22	GO:0005774: vacuolar membrane	3.90E-02
23	GO:0005618: cell wall	4.73E-02