co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G16190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006105: succinate metabolic process	0.00E+00
2	GO:0045022: early endosome to late endosome transport	0.00E+00
3	GO:0019484: beta-alanine catabolic process	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:0006983: ER overload response	0.00E+00
6	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
7	GO:0048227: plasma membrane to endosome transport	0.00E+00
8	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
9	GO:0010398: xylogalacturonan metabolic process	0.00E+00
10	GO:0045185: maintenance of protein location	0.00E+00
11	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
12	GO:0006592: ornithine biosynthetic process	0.00E+00
13	GO:0006593: ornithine catabolic process	0.00E+00
14	GO:0032780: negative regulation of ATPase activity	0.00E+00
15	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
16	GO:0019441: tryptophan catabolic process to kynurenine	2.32E-06
17	GO:0046686: response to cadmium ion	1.23E-04
18	GO:0010184: cytokinin transport	2.22E-04
19	GO:0009865: pollen tube adhesion	2.22E-04
20	GO:0035344: hypoxanthine transport	2.22E-04
21	GO:0006540: glutamate decarboxylation to succinate	2.22E-04
22	GO:0035494: SNARE complex disassembly	2.22E-04
23	GO:0019544: arginine catabolic process to glutamate	2.22E-04
24	GO:0098721: uracil import across plasma membrane	2.22E-04
25	GO:0006144: purine nucleobase metabolic process	2.22E-04
26	GO:0098702: adenine import across plasma membrane	2.22E-04
27	GO:0035266: meristem growth	2.22E-04
28	GO:0098710: guanine import across plasma membrane	2.22E-04
29	GO:0009450: gamma-aminobutyric acid catabolic process	2.22E-04
30	GO:0007292: female gamete generation	2.22E-04
31	GO:0019628: urate catabolic process	2.22E-04
32	GO:1903409: reactive oxygen species biosynthetic process	2.22E-04
33	GO:0006481: C-terminal protein methylation	2.22E-04
34	GO:0048367: shoot system development	2.53E-04
35	GO:0009821: alkaloid biosynthetic process	2.91E-04
36	GO:0043069: negative regulation of programmed cell death	4.05E-04
37	GO:0048829: root cap development	4.05E-04
38	GO:0055114: oxidation-reduction process	4.20E-04
39	GO:0043066: negative regulation of apoptotic process	4.95E-04
40	GO:0015865: purine nucleotide transport	4.95E-04
41	GO:0051788: response to misfolded protein	4.95E-04
42	GO:1900459: positive regulation of brassinosteroid mediated signaling pathway	4.95E-04
43	GO:1902000: homogentisate catabolic process	4.95E-04
44	GO:0007154: cell communication	4.95E-04
45	GO:0052542: defense response by callose deposition	4.95E-04
46	GO:0051258: protein polymerization	4.95E-04
47	GO:0010033: response to organic substance	4.95E-04
48	GO:0006672: ceramide metabolic process	4.95E-04
49	GO:0071365: cellular response to auxin stimulus	5.37E-04
50	GO:0000266: mitochondrial fission	5.37E-04
51	GO:0006499: N-terminal protein myristoylation	5.75E-04
52	GO:0016051: carbohydrate biosynthetic process	6.86E-04
53	GO:0010359: regulation of anion channel activity	8.05E-04
54	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.05E-04
55	GO:0051646: mitochondrion localization	8.05E-04
56	GO:0009072: aromatic amino acid family metabolic process	8.05E-04
57	GO:0060968: regulation of gene silencing	8.05E-04
58	GO:0009651: response to salt stress	1.05E-03
59	GO:0009399: nitrogen fixation	1.15E-03
60	GO:0072583: clathrin-dependent endocytosis	1.15E-03
61	GO:0071786: endoplasmic reticulum tubular network organization	1.15E-03
62	GO:0001676: long-chain fatty acid metabolic process	1.15E-03
63	GO:0006572: tyrosine catabolic process	1.15E-03
64	GO:0006020: inositol metabolic process	1.15E-03
65	GO:2001289: lipid X metabolic process	1.15E-03
66	GO:0070301: cellular response to hydrogen peroxide	1.15E-03
67	GO:0046902: regulation of mitochondrial membrane permeability	1.15E-03
68	GO:0010222: stem vascular tissue pattern formation	1.53E-03
69	GO:0006536: glutamate metabolic process	1.53E-03
70	GO:0009626: plant-type hypersensitive response	1.82E-03
71	GO:0030308: negative regulation of cell growth	1.95E-03
72	GO:0016192: vesicle-mediated transport	2.19E-03
73	GO:0006979: response to oxidative stress	2.22E-03
74	GO:0006635: fatty acid beta-oxidation	2.26E-03
75	GO:1900425: negative regulation of defense response to bacterium	2.40E-03
76	GO:0010337: regulation of salicylic acid metabolic process	2.40E-03
77	GO:0035435: phosphate ion transmembrane transport	2.40E-03
78	GO:0006014: D-ribose metabolic process	2.40E-03
79	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.40E-03
80	GO:0006561: proline biosynthetic process	2.40E-03
81	GO:0048827: phyllome development	2.40E-03
82	GO:0048232: male gamete generation	2.40E-03
83	GO:0006555: methionine metabolic process	2.40E-03
84	GO:0043248: proteasome assembly	2.40E-03
85	GO:1902456: regulation of stomatal opening	2.40E-03
86	GO:0010358: leaf shaping	2.40E-03
87	GO:0007264: small GTPase mediated signal transduction	2.42E-03
88	GO:0006914: autophagy	2.74E-03
89	GO:0006694: steroid biosynthetic process	2.89E-03
90	GO:0048280: vesicle fusion with Golgi apparatus	2.89E-03
91	GO:0019509: L-methionine salvage from methylthioadenosine	2.89E-03
92	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.40E-03
93	GO:0071669: plant-type cell wall organization or biogenesis	3.40E-03
94	GO:0006333: chromatin assembly or disassembly	3.40E-03
95	GO:0050790: regulation of catalytic activity	3.40E-03
96	GO:0098869: cellular oxidant detoxification	3.40E-03
97	GO:0006955: immune response	3.40E-03
98	GO:0046470: phosphatidylcholine metabolic process	3.40E-03
99	GO:0009395: phospholipid catabolic process	3.40E-03
100	GO:0009816: defense response to bacterium, incompatible interaction	3.45E-03
101	GO:0048364: root development	3.91E-03
102	GO:0009819: drought recovery	3.94E-03
103	GO:0006605: protein targeting	3.94E-03
104	GO:1900150: regulation of defense response to fungus	3.94E-03
105	GO:0010078: maintenance of root meristem identity	3.94E-03
106	GO:0016559: peroxisome fission	3.94E-03
107	GO:0008219: cell death	4.25E-03
108	GO:0010150: leaf senescence	4.26E-03
109	GO:0010311: lateral root formation	4.46E-03
110	GO:0006526: arginine biosynthetic process	4.51E-03
111	GO:0030968: endoplasmic reticulum unfolded protein response	4.51E-03
112	GO:0006972: hyperosmotic response	4.51E-03
113	GO:0010119: regulation of stomatal movement	4.91E-03
114	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.74E-03
115	GO:0008202: steroid metabolic process	5.74E-03
116	GO:0006896: Golgi to vacuole transport	6.38E-03
117	GO:0006535: cysteine biosynthetic process from serine	6.38E-03
118	GO:0006631: fatty acid metabolic process	6.39E-03
119	GO:0043085: positive regulation of catalytic activity	7.06E-03
120	GO:0006378: mRNA polyadenylation	7.06E-03
121	GO:0010015: root morphogenesis	7.06E-03
122	GO:0000038: very long-chain fatty acid metabolic process	7.06E-03
123	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.76E-03
124	GO:0018107: peptidyl-threonine phosphorylation	8.48E-03
125	GO:0006541: glutamine metabolic process	9.23E-03
126	GO:0009933: meristem structural organization	9.23E-03
127	GO:0010167: response to nitrate	1.00E-02
128	GO:0005985: sucrose metabolic process	1.00E-02
129	GO:0090351: seedling development	1.00E-02
130	GO:0007031: peroxisome organization	1.00E-02
131	GO:0046777: protein autophosphorylation	1.06E-02
132	GO:0006863: purine nucleobase transport	1.08E-02
133	GO:0000162: tryptophan biosynthetic process	1.08E-02
134	GO:0019344: cysteine biosynthetic process	1.16E-02
135	GO:0051302: regulation of cell division	1.24E-02
136	GO:0006886: intracellular protein transport	1.28E-02
137	GO:0031408: oxylipin biosynthetic process	1.33E-02
138	GO:0018105: peptidyl-serine phosphorylation	1.38E-02
139	GO:0006511: ubiquitin-dependent protein catabolic process	1.39E-02
140	GO:0030433: ubiquitin-dependent ERAD pathway	1.42E-02
141	GO:0007005: mitochondrion organization	1.42E-02
142	GO:0006012: galactose metabolic process	1.51E-02
143	GO:0042147: retrograde transport, endosome to Golgi	1.70E-02
144	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.70E-02
145	GO:0000271: polysaccharide biosynthetic process	1.79E-02
146	GO:0009845: seed germination	1.81E-02
147	GO:0045489: pectin biosynthetic process	1.89E-02
148	GO:0010154: fruit development	1.89E-02
149	GO:0006662: glycerol ether metabolic process	1.89E-02
150	GO:0006508: proteolysis	1.95E-02
151	GO:0061025: membrane fusion	1.99E-02
152	GO:0006623: protein targeting to vacuole	2.09E-02
153	GO:0010183: pollen tube guidance	2.09E-02
154	GO:0009749: response to glucose	2.09E-02
155	GO:0019252: starch biosynthetic process	2.09E-02
156	GO:0000302: response to reactive oxygen species	2.19E-02
157	GO:0006891: intra-Golgi vesicle-mediated transport	2.19E-02
158	GO:0009873: ethylene-activated signaling pathway	2.21E-02
159	GO:0009630: gravitropism	2.30E-02
160	GO:0030163: protein catabolic process	2.41E-02
161	GO:0009414: response to water deprivation	2.44E-02
162	GO:0006464: cellular protein modification process	2.52E-02
163	GO:0071805: potassium ion transmembrane transport	2.63E-02
164	GO:0051607: defense response to virus	2.74E-02
165	GO:0001666: response to hypoxia	2.85E-02
166	GO:0009615: response to virus	2.85E-02
167	GO:0016126: sterol biosynthetic process	2.85E-02
168	GO:0010029: regulation of seed germination	2.97E-02
169	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.97E-02
170	GO:0009738: abscisic acid-activated signaling pathway	3.16E-02
171	GO:0006888: ER to Golgi vesicle-mediated transport	3.20E-02
172	GO:0006950: response to stress	3.20E-02
173	GO:0030244: cellulose biosynthetic process	3.45E-02
174	GO:0035556: intracellular signal transduction	3.52E-02
175	GO:0009832: plant-type cell wall biogenesis	3.57E-02
176	GO:0048767: root hair elongation	3.57E-02
177	GO:0010043: response to zinc ion	3.82E-02
178	GO:0045893: positive regulation of transcription, DNA-templated	3.90E-02
179	GO:0009409: response to cold	3.93E-02
180	GO:0006865: amino acid transport	3.95E-02
181	GO:0045087: innate immune response	4.08E-02
182	GO:0034599: cellular response to oxidative stress	4.21E-02
183	GO:0006099: tricarboxylic acid cycle	4.21E-02
184	GO:0055085: transmembrane transport	4.41E-02
185	GO:0006839: mitochondrial transport	4.47E-02
186	GO:0010200: response to chitin	4.57E-02
187	GO:0006897: endocytosis	4.61E-02
188	GO:0009926: auxin polar transport	4.88E-02
189	GO:0051707: response to other organism	4.88E-02
190	GO:0016567: protein ubiquitination	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004334: fumarylacetoacetase activity	0.00E+00
2	GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity	0.00E+00
3	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
4	GO:0004846: urate oxidase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
7	GO:0042030: ATPase inhibitor activity	0.00E+00
8	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
9	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
10	GO:0019211: phosphatase activator activity	0.00E+00
11	GO:0004061: arylformamidase activity	2.32E-06
12	GO:0005496: steroid binding	5.65E-05
13	GO:0015294: solute:cation symporter activity	2.22E-04
14	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.22E-04
15	GO:0003867: 4-aminobutyrate transaminase activity	2.22E-04
16	GO:0015207: adenine transmembrane transporter activity	2.22E-04
17	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.22E-04
18	GO:0032050: clathrin heavy chain binding	2.22E-04
19	GO:0001530: lipopolysaccharide binding	2.22E-04
20	GO:0015208: guanine transmembrane transporter activity	2.22E-04
21	GO:0047617: acyl-CoA hydrolase activity	3.46E-04
22	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	3.46E-04
23	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.95E-04
24	GO:0047216: inositol 3-alpha-galactosyltransferase activity	4.95E-04
25	GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity	4.95E-04
26	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	8.05E-04
27	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	8.05E-04
28	GO:0005483: soluble NSF attachment protein activity	8.05E-04
29	GO:0005093: Rab GDP-dissociation inhibitor activity	8.05E-04
30	GO:0008430: selenium binding	8.05E-04
31	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.05E-04
32	GO:0005047: signal recognition particle binding	8.05E-04
33	GO:0004108: citrate (Si)-synthase activity	1.15E-03
34	GO:0030527: structural constituent of chromatin	1.15E-03
35	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.15E-03
36	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.15E-03
37	GO:0004300: enoyl-CoA hydratase activity	1.15E-03
38	GO:0016788: hydrolase activity, acting on ester bonds	1.50E-03
39	GO:0016004: phospholipase activator activity	1.53E-03
40	GO:0004834: tryptophan synthase activity	1.53E-03
41	GO:0019905: syntaxin binding	1.53E-03
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.53E-03
43	GO:0043015: gamma-tubulin binding	1.53E-03
44	GO:0015210: uracil transmembrane transporter activity	1.53E-03
45	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.95E-03
46	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.95E-03
47	GO:0005471: ATP:ADP antiporter activity	1.95E-03
48	GO:0004356: glutamate-ammonia ligase activity	1.95E-03
49	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.40E-03
50	GO:0035252: UDP-xylosyltransferase activity	2.40E-03
51	GO:0036402: proteasome-activating ATPase activity	2.40E-03
52	GO:0004747: ribokinase activity	2.89E-03
53	GO:0004602: glutathione peroxidase activity	2.89E-03
54	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.89E-03
55	GO:0004124: cysteine synthase activity	2.89E-03
56	GO:0051753: mannan synthase activity	2.89E-03
57	GO:0030170: pyridoxal phosphate binding	3.23E-03
58	GO:0051213: dioxygenase activity	3.26E-03
59	GO:0004620: phospholipase activity	3.40E-03
60	GO:0052747: sinapyl alcohol dehydrogenase activity	3.94E-03
61	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.94E-03
62	GO:0008865: fructokinase activity	3.94E-03
63	GO:0005096: GTPase activator activity	4.46E-03
64	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.51E-03
65	GO:0008142: oxysterol binding	4.51E-03
66	GO:0004630: phospholipase D activity	4.51E-03
67	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	5.11E-03
68	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.11E-03
69	GO:0005525: GTP binding	5.29E-03
70	GO:0045309: protein phosphorylated amino acid binding	5.74E-03
71	GO:0009672: auxin:proton symporter activity	5.74E-03
72	GO:0016844: strictosidine synthase activity	5.74E-03
73	GO:0019904: protein domain specific binding	7.06E-03
74	GO:0008794: arsenate reductase (glutaredoxin) activity	7.06E-03
75	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.76E-03
76	GO:0004521: endoribonuclease activity	7.76E-03
77	GO:0005315: inorganic phosphate transmembrane transporter activity	8.48E-03
78	GO:0004175: endopeptidase activity	9.23E-03
79	GO:0004190: aspartic-type endopeptidase activity	1.00E-02
80	GO:0017025: TBP-class protein binding	1.00E-02
81	GO:0004725: protein tyrosine phosphatase activity	1.08E-02
82	GO:0043130: ubiquitin binding	1.16E-02
83	GO:0005515: protein binding	1.19E-02
84	GO:0016491: oxidoreductase activity	1.23E-02
85	GO:0015079: potassium ion transmembrane transporter activity	1.24E-02
86	GO:0043424: protein histidine kinase binding	1.24E-02
87	GO:0005345: purine nucleobase transmembrane transporter activity	1.24E-02
88	GO:0015035: protein disulfide oxidoreductase activity	1.38E-02
89	GO:0016760: cellulose synthase (UDP-forming) activity	1.51E-02
90	GO:0003924: GTPase activity	1.60E-02
91	GO:0003727: single-stranded RNA binding	1.60E-02
92	GO:0005516: calmodulin binding	1.62E-02
93	GO:0047134: protein-disulfide reductase activity	1.70E-02
94	GO:0004674: protein serine/threonine kinase activity	1.91E-02
95	GO:0010181: FMN binding	1.99E-02
96	GO:0004791: thioredoxin-disulfide reductase activity	1.99E-02
97	GO:0043565: sequence-specific DNA binding	2.07E-02
98	GO:0004872: receptor activity	2.09E-02
99	GO:0004197: cysteine-type endopeptidase activity	2.30E-02
100	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.41E-02
101	GO:0008017: microtubule binding	2.42E-02
102	GO:0016759: cellulose synthase activity	2.52E-02
103	GO:0008237: metallopeptidase activity	2.63E-02
104	GO:0008375: acetylglucosaminyltransferase activity	3.09E-02
105	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.09E-02
106	GO:0004683: calmodulin-dependent protein kinase activity	3.20E-02
107	GO:0008236: serine-type peptidase activity	3.32E-02
108	GO:0004222: metalloendopeptidase activity	3.70E-02
109	GO:0050897: cobalt ion binding	3.82E-02
110	GO:0004842: ubiquitin-protein transferase activity	4.04E-02
111	GO:0003746: translation elongation factor activity	4.08E-02
112	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.08E-02
113	GO:0003993: acid phosphatase activity	4.21E-02
114	GO:0000149: SNARE binding	4.34E-02
115	GO:0008233: peptidase activity	4.35E-02
116	GO:0005484: SNAP receptor activity	4.88E-02
117	GO:0020037: heme binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0010009: cytoplasmic side of endosome membrane	0.00E+00
3	GO:0005783: endoplasmic reticulum	5.09E-08
4	GO:0005773: vacuole	1.69E-06
5	GO:0005886: plasma membrane	5.71E-05
6	GO:0005794: Golgi apparatus	9.03E-05
7	GO:0005789: endoplasmic reticulum membrane	1.16E-04
8	GO:0005777: peroxisome	1.59E-04
9	GO:0005774: vacuolar membrane	3.81E-04
10	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.05E-04
11	GO:0071782: endoplasmic reticulum tubular network	1.15E-03
12	GO:0005849: mRNA cleavage factor complex	1.15E-03
13	GO:0005829: cytosol	1.50E-03
14	GO:0005737: cytoplasm	2.24E-03
15	GO:0030140: trans-Golgi network transport vesicle	2.40E-03
16	GO:0031597: cytosolic proteasome complex	2.89E-03
17	GO:0030173: integral component of Golgi membrane	2.89E-03
18	GO:0031595: nuclear proteasome complex	3.40E-03
19	GO:0012507: ER to Golgi transport vesicle membrane	3.94E-03
20	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.94E-03
21	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.51E-03
22	GO:0005802: trans-Golgi network	5.05E-03
23	GO:0031901: early endosome membrane	5.11E-03
24	GO:0008540: proteasome regulatory particle, base subcomplex	5.74E-03
25	GO:0005768: endosome	6.32E-03
26	GO:0030125: clathrin vesicle coat	6.38E-03
27	GO:0031201: SNARE complex	6.39E-03
28	GO:0005764: lysosome	9.23E-03
29	GO:0000502: proteasome complex	9.36E-03
30	GO:0005635: nuclear envelope	1.00E-02
31	GO:0005769: early endosome	1.08E-02
32	GO:0005741: mitochondrial outer membrane	1.33E-02
33	GO:0016020: membrane	1.46E-02
34	GO:0009506: plasmodesma	1.50E-02
35	GO:0030136: clathrin-coated vesicle	1.70E-02
36	GO:0005770: late endosome	1.89E-02
37	GO:0016021: integral component of membrane	1.94E-02
38	GO:0005759: mitochondrial matrix	2.11E-02
39	GO:0000785: chromatin	2.30E-02
40	GO:0005615: extracellular space	2.59E-02
41	GO:0005778: peroxisomal membrane	2.63E-02
42	GO:0000325: plant-type vacuole	3.82E-02
43	GO:0031902: late endosome membrane	4.61E-02