GO Enrichment Analysis of Co-expressed Genes with
AT4G15630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 3 | GO:0006066: alcohol metabolic process | 0.00E+00 |
| 4 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:0015979: photosynthesis | 1.51E-07 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 4.74E-07 |
| 8 | GO:0006810: transport | 9.10E-06 |
| 9 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.59E-05 |
| 10 | GO:2000122: negative regulation of stomatal complex development | 4.69E-05 |
| 11 | GO:0010037: response to carbon dioxide | 4.69E-05 |
| 12 | GO:0015976: carbon utilization | 4.69E-05 |
| 13 | GO:0010190: cytochrome b6f complex assembly | 1.09E-04 |
| 14 | GO:0046520: sphingoid biosynthetic process | 2.63E-04 |
| 15 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.63E-04 |
| 16 | GO:1904966: positive regulation of vitamin E biosynthetic process | 2.63E-04 |
| 17 | GO:0071370: cellular response to gibberellin stimulus | 2.63E-04 |
| 18 | GO:1904964: positive regulation of phytol biosynthetic process | 2.63E-04 |
| 19 | GO:0033481: galacturonate biosynthetic process | 2.63E-04 |
| 20 | GO:0042371: vitamin K biosynthetic process | 2.63E-04 |
| 21 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.63E-04 |
| 22 | GO:0042254: ribosome biogenesis | 4.38E-04 |
| 23 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 5.78E-04 |
| 24 | GO:0010115: regulation of abscisic acid biosynthetic process | 5.78E-04 |
| 25 | GO:0010024: phytochromobilin biosynthetic process | 5.78E-04 |
| 26 | GO:0010411: xyloglucan metabolic process | 6.03E-04 |
| 27 | GO:0018298: protein-chromophore linkage | 6.87E-04 |
| 28 | GO:0019253: reductive pentose-phosphate cycle | 8.62E-04 |
| 29 | GO:0006788: heme oxidation | 9.39E-04 |
| 30 | GO:0006753: nucleoside phosphate metabolic process | 9.39E-04 |
| 31 | GO:0006954: inflammatory response | 9.39E-04 |
| 32 | GO:0006518: peptide metabolic process | 9.39E-04 |
| 33 | GO:0071492: cellular response to UV-A | 9.39E-04 |
| 34 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.07E-03 |
| 35 | GO:0045490: pectin catabolic process | 1.08E-03 |
| 36 | GO:0000027: ribosomal large subunit assembly | 1.18E-03 |
| 37 | GO:0042546: cell wall biogenesis | 1.33E-03 |
| 38 | GO:0006165: nucleoside diphosphate phosphorylation | 1.34E-03 |
| 39 | GO:0006228: UTP biosynthetic process | 1.34E-03 |
| 40 | GO:0006241: CTP biosynthetic process | 1.34E-03 |
| 41 | GO:0061077: chaperone-mediated protein folding | 1.43E-03 |
| 42 | GO:0031122: cytoplasmic microtubule organization | 1.79E-03 |
| 43 | GO:0006546: glycine catabolic process | 1.79E-03 |
| 44 | GO:0071486: cellular response to high light intensity | 1.79E-03 |
| 45 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.79E-03 |
| 46 | GO:0006183: GTP biosynthetic process | 1.79E-03 |
| 47 | GO:0009658: chloroplast organization | 2.10E-03 |
| 48 | GO:0042335: cuticle development | 2.16E-03 |
| 49 | GO:0080110: sporopollenin biosynthetic process | 2.29E-03 |
| 50 | GO:0031365: N-terminal protein amino acid modification | 2.29E-03 |
| 51 | GO:0006461: protein complex assembly | 2.29E-03 |
| 52 | GO:0006412: translation | 2.37E-03 |
| 53 | GO:0055114: oxidation-reduction process | 2.44E-03 |
| 54 | GO:0042545: cell wall modification | 2.78E-03 |
| 55 | GO:0006561: proline biosynthetic process | 2.82E-03 |
| 56 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.82E-03 |
| 57 | GO:0016554: cytidine to uridine editing | 2.82E-03 |
| 58 | GO:0009735: response to cytokinin | 2.88E-03 |
| 59 | GO:1901259: chloroplast rRNA processing | 3.40E-03 |
| 60 | GO:0042372: phylloquinone biosynthetic process | 3.40E-03 |
| 61 | GO:0010019: chloroplast-nucleus signaling pathway | 3.40E-03 |
| 62 | GO:0009955: adaxial/abaxial pattern specification | 3.40E-03 |
| 63 | GO:0050829: defense response to Gram-negative bacterium | 4.00E-03 |
| 64 | GO:0015937: coenzyme A biosynthetic process | 4.00E-03 |
| 65 | GO:0010444: guard mother cell differentiation | 4.00E-03 |
| 66 | GO:0006400: tRNA modification | 4.00E-03 |
| 67 | GO:0030497: fatty acid elongation | 4.00E-03 |
| 68 | GO:0046620: regulation of organ growth | 4.65E-03 |
| 69 | GO:0030091: protein repair | 4.65E-03 |
| 70 | GO:0055085: transmembrane transport | 5.13E-03 |
| 71 | GO:0006633: fatty acid biosynthetic process | 5.13E-03 |
| 72 | GO:0009657: plastid organization | 5.32E-03 |
| 73 | GO:0032544: plastid translation | 5.32E-03 |
| 74 | GO:0017004: cytochrome complex assembly | 5.32E-03 |
| 75 | GO:0000160: phosphorelay signal transduction system | 5.67E-03 |
| 76 | GO:0010206: photosystem II repair | 6.03E-03 |
| 77 | GO:0010119: regulation of stomatal movement | 6.23E-03 |
| 78 | GO:0009409: response to cold | 6.39E-03 |
| 79 | GO:1900865: chloroplast RNA modification | 6.77E-03 |
| 80 | GO:0010205: photoinhibition | 6.77E-03 |
| 81 | GO:0034599: cellular response to oxidative stress | 7.15E-03 |
| 82 | GO:0019538: protein metabolic process | 7.54E-03 |
| 83 | GO:0009688: abscisic acid biosynthetic process | 7.54E-03 |
| 84 | GO:0043069: negative regulation of programmed cell death | 7.54E-03 |
| 85 | GO:0009641: shade avoidance | 7.54E-03 |
| 86 | GO:0019684: photosynthesis, light reaction | 8.35E-03 |
| 87 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.35E-03 |
| 88 | GO:0009073: aromatic amino acid family biosynthetic process | 8.35E-03 |
| 89 | GO:0043085: positive regulation of catalytic activity | 8.35E-03 |
| 90 | GO:0009750: response to fructose | 8.35E-03 |
| 91 | GO:0018119: peptidyl-cysteine S-nitrosylation | 8.35E-03 |
| 92 | GO:0000038: very long-chain fatty acid metabolic process | 8.35E-03 |
| 93 | GO:0009644: response to high light intensity | 9.55E-03 |
| 94 | GO:0006006: glucose metabolic process | 1.00E-02 |
| 95 | GO:0009725: response to hormone | 1.00E-02 |
| 96 | GO:0010020: chloroplast fission | 1.09E-02 |
| 97 | GO:0010143: cutin biosynthetic process | 1.09E-02 |
| 98 | GO:0071555: cell wall organization | 1.16E-02 |
| 99 | GO:0005985: sucrose metabolic process | 1.18E-02 |
| 100 | GO:0009225: nucleotide-sugar metabolic process | 1.18E-02 |
| 101 | GO:0009736: cytokinin-activated signaling pathway | 1.19E-02 |
| 102 | GO:0010025: wax biosynthetic process | 1.28E-02 |
| 103 | GO:0006833: water transport | 1.28E-02 |
| 104 | GO:0019762: glucosinolate catabolic process | 1.28E-02 |
| 105 | GO:0006487: protein N-linked glycosylation | 1.38E-02 |
| 106 | GO:0006096: glycolytic process | 1.41E-02 |
| 107 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.48E-02 |
| 108 | GO:0031408: oxylipin biosynthetic process | 1.58E-02 |
| 109 | GO:0016998: cell wall macromolecule catabolic process | 1.58E-02 |
| 110 | GO:0045454: cell redox homeostasis | 1.67E-02 |
| 111 | GO:0030245: cellulose catabolic process | 1.68E-02 |
| 112 | GO:0006869: lipid transport | 1.87E-02 |
| 113 | GO:0019722: calcium-mediated signaling | 1.90E-02 |
| 114 | GO:0042127: regulation of cell proliferation | 1.90E-02 |
| 115 | GO:0010584: pollen exine formation | 1.90E-02 |
| 116 | GO:0080022: primary root development | 2.13E-02 |
| 117 | GO:0034220: ion transmembrane transport | 2.13E-02 |
| 118 | GO:0006662: glycerol ether metabolic process | 2.24E-02 |
| 119 | GO:0010182: sugar mediated signaling pathway | 2.24E-02 |
| 120 | GO:0000302: response to reactive oxygen species | 2.61E-02 |
| 121 | GO:1901657: glycosyl compound metabolic process | 2.86E-02 |
| 122 | GO:0019760: glucosinolate metabolic process | 2.99E-02 |
| 123 | GO:0007267: cell-cell signaling | 3.12E-02 |
| 124 | GO:0010027: thylakoid membrane organization | 3.39E-02 |
| 125 | GO:0009414: response to water deprivation | 3.47E-02 |
| 126 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.52E-02 |
| 127 | GO:0042128: nitrate assimilation | 3.66E-02 |
| 128 | GO:0016311: dephosphorylation | 3.95E-02 |
| 129 | GO:0009817: defense response to fungus, incompatible interaction | 4.09E-02 |
| 130 | GO:0009738: abscisic acid-activated signaling pathway | 4.25E-02 |
| 131 | GO:0009407: toxin catabolic process | 4.38E-02 |
| 132 | GO:0010218: response to far red light | 4.38E-02 |
| 133 | GO:0009631: cold acclimation | 4.53E-02 |
| 134 | GO:0009637: response to blue light | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 2 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 7 | GO:0046577: long-chain-alcohol oxidase activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 8.40E-06 |
| 9 | GO:0016168: chlorophyll binding | 4.44E-05 |
| 10 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.69E-05 |
| 11 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 8.68E-05 |
| 12 | GO:0003735: structural constituent of ribosome | 1.44E-04 |
| 13 | GO:0022891: substrate-specific transmembrane transporter activity | 1.44E-04 |
| 14 | GO:0004033: aldo-keto reductase (NADP) activity | 2.48E-04 |
| 15 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.63E-04 |
| 16 | GO:0010945: CoA pyrophosphatase activity | 2.63E-04 |
| 17 | GO:0008568: microtubule-severing ATPase activity | 2.63E-04 |
| 18 | GO:0000170: sphingosine hydroxylase activity | 2.63E-04 |
| 19 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.02E-04 |
| 20 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.06E-04 |
| 21 | GO:0030599: pectinesterase activity | 4.31E-04 |
| 22 | GO:0042284: sphingolipid delta-4 desaturase activity | 5.78E-04 |
| 23 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 5.78E-04 |
| 24 | GO:0008967: phosphoglycolate phosphatase activity | 5.78E-04 |
| 25 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.78E-04 |
| 26 | GO:0042389: omega-3 fatty acid desaturase activity | 5.78E-04 |
| 27 | GO:0004618: phosphoglycerate kinase activity | 5.78E-04 |
| 28 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.03E-04 |
| 29 | GO:0004089: carbonate dehydratase activity | 7.67E-04 |
| 30 | GO:0050734: hydroxycinnamoyltransferase activity | 9.39E-04 |
| 31 | GO:0070402: NADPH binding | 9.39E-04 |
| 32 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.39E-04 |
| 33 | GO:0005528: FK506 binding | 1.18E-03 |
| 34 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.34E-03 |
| 35 | GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | 1.34E-03 |
| 36 | GO:0004550: nucleoside diphosphate kinase activity | 1.34E-03 |
| 37 | GO:0001872: (1->3)-beta-D-glucan binding | 1.34E-03 |
| 38 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.34E-03 |
| 39 | GO:0009055: electron carrier activity | 1.39E-03 |
| 40 | GO:0043495: protein anchor | 1.79E-03 |
| 41 | GO:0050378: UDP-glucuronate 4-epimerase activity | 1.79E-03 |
| 42 | GO:0004392: heme oxygenase (decyclizing) activity | 1.79E-03 |
| 43 | GO:0045330: aspartyl esterase activity | 2.10E-03 |
| 44 | GO:0009922: fatty acid elongase activity | 2.29E-03 |
| 45 | GO:0004130: cytochrome-c peroxidase activity | 2.82E-03 |
| 46 | GO:0000210: NAD+ diphosphatase activity | 2.82E-03 |
| 47 | GO:0016208: AMP binding | 2.82E-03 |
| 48 | GO:0016688: L-ascorbate peroxidase activity | 2.82E-03 |
| 49 | GO:0008200: ion channel inhibitor activity | 2.82E-03 |
| 50 | GO:0048038: quinone binding | 2.87E-03 |
| 51 | GO:0000156: phosphorelay response regulator activity | 3.26E-03 |
| 52 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.40E-03 |
| 53 | GO:0051920: peroxiredoxin activity | 3.40E-03 |
| 54 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.40E-03 |
| 55 | GO:0019899: enzyme binding | 4.00E-03 |
| 56 | GO:0008235: metalloexopeptidase activity | 4.00E-03 |
| 57 | GO:0004564: beta-fructofuranosidase activity | 4.65E-03 |
| 58 | GO:0016209: antioxidant activity | 4.65E-03 |
| 59 | GO:0016491: oxidoreductase activity | 6.05E-03 |
| 60 | GO:0004575: sucrose alpha-glucosidase activity | 6.77E-03 |
| 61 | GO:0030234: enzyme regulator activity | 7.54E-03 |
| 62 | GO:0008047: enzyme activator activity | 7.54E-03 |
| 63 | GO:0042802: identical protein binding | 7.85E-03 |
| 64 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.35E-03 |
| 65 | GO:0004177: aminopeptidase activity | 8.35E-03 |
| 66 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.55E-03 |
| 67 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.00E-02 |
| 68 | GO:0031072: heat shock protein binding | 1.00E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.03E-02 |
| 70 | GO:0008146: sulfotransferase activity | 1.18E-02 |
| 71 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.28E-02 |
| 72 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.28E-02 |
| 73 | GO:0031409: pigment binding | 1.28E-02 |
| 74 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.28E-02 |
| 75 | GO:0004857: enzyme inhibitor activity | 1.38E-02 |
| 76 | GO:0052689: carboxylic ester hydrolase activity | 1.51E-02 |
| 77 | GO:0015035: protein disulfide oxidoreductase activity | 1.75E-02 |
| 78 | GO:0030570: pectate lyase activity | 1.79E-02 |
| 79 | GO:0008810: cellulase activity | 1.79E-02 |
| 80 | GO:0008514: organic anion transmembrane transporter activity | 1.90E-02 |
| 81 | GO:0047134: protein-disulfide reductase activity | 2.01E-02 |
| 82 | GO:0050662: coenzyme binding | 2.36E-02 |
| 83 | GO:0004791: thioredoxin-disulfide reductase activity | 2.36E-02 |
| 84 | GO:0004872: receptor activity | 2.48E-02 |
| 85 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.86E-02 |
| 86 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.12E-02 |
| 87 | GO:0008289: lipid binding | 3.28E-02 |
| 88 | GO:0046872: metal ion binding | 3.29E-02 |
| 89 | GO:0015250: water channel activity | 3.39E-02 |
| 90 | GO:0008375: acetylglucosaminyltransferase activity | 3.66E-02 |
| 91 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 3.66E-02 |
| 92 | GO:0030247: polysaccharide binding | 3.80E-02 |
| 93 | GO:0004683: calmodulin-dependent protein kinase activity | 3.80E-02 |
| 94 | GO:0102483: scopolin beta-glucosidase activity | 3.80E-02 |
| 95 | GO:0008236: serine-type peptidase activity | 3.95E-02 |
| 96 | GO:0003824: catalytic activity | 4.11E-02 |
| 97 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 4.38E-02 |
| 98 | GO:0004222: metalloendopeptidase activity | 4.38E-02 |
| 99 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.53E-02 |
| 100 | GO:0016788: hydrolase activity, acting on ester bonds | 4.62E-02 |
| 101 | GO:0003993: acid phosphatase activity | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.35E-28 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.34E-19 |
| 4 | GO:0009570: chloroplast stroma | 1.69E-11 |
| 5 | GO:0009579: thylakoid | 8.42E-10 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.07E-09 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.19E-09 |
| 8 | GO:0009941: chloroplast envelope | 2.53E-09 |
| 9 | GO:0031977: thylakoid lumen | 4.56E-07 |
| 10 | GO:0048046: apoplast | 4.37E-06 |
| 11 | GO:0009523: photosystem II | 1.63E-05 |
| 12 | GO:0005618: cell wall | 3.20E-05 |
| 13 | GO:0009534: chloroplast thylakoid | 6.63E-05 |
| 14 | GO:0042651: thylakoid membrane | 9.59E-05 |
| 15 | GO:0005840: ribosome | 3.27E-04 |
| 16 | GO:0010319: stromule | 4.21E-04 |
| 17 | GO:0042170: plastid membrane | 5.78E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 8.62E-04 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 1.30E-03 |
| 20 | GO:0005960: glycine cleavage complex | 1.34E-03 |
| 21 | GO:0005775: vacuolar lumen | 1.34E-03 |
| 22 | GO:0046658: anchored component of plasma membrane | 1.66E-03 |
| 23 | GO:0031225: anchored component of membrane | 2.10E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 2.68E-03 |
| 25 | GO:0031969: chloroplast membrane | 2.92E-03 |
| 26 | GO:0005778: peroxisomal membrane | 3.68E-03 |
| 27 | GO:0009533: chloroplast stromal thylakoid | 4.00E-03 |
| 28 | GO:0009505: plant-type cell wall | 5.49E-03 |
| 29 | GO:0005763: mitochondrial small ribosomal subunit | 6.03E-03 |
| 30 | GO:0015934: large ribosomal subunit | 6.23E-03 |
| 31 | GO:0000311: plastid large ribosomal subunit | 9.17E-03 |
| 32 | GO:0000312: plastid small ribosomal subunit | 1.09E-02 |
| 33 | GO:0030076: light-harvesting complex | 1.18E-02 |
| 34 | GO:0005758: mitochondrial intermembrane space | 1.38E-02 |
| 35 | GO:0016021: integral component of membrane | 1.49E-02 |
| 36 | GO:0009532: plastid stroma | 1.58E-02 |
| 37 | GO:0009706: chloroplast inner membrane | 1.70E-02 |
| 38 | GO:0005576: extracellular region | 2.29E-02 |
| 39 | GO:0009522: photosystem I | 2.36E-02 |
| 40 | GO:0032580: Golgi cisterna membrane | 2.99E-02 |
| 41 | GO:0000325: plant-type vacuole | 4.53E-02 |