co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G14500

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
2	GO:0042821: pyridoxal biosynthetic process	0.00E+00
3	GO:0042820: vitamin B6 catabolic process	0.00E+00
4	GO:0009443: pyridoxal 5'-phosphate salvage	5.18E-05
5	GO:0010270: photosystem II oxygen evolving complex assembly	1.27E-04
6	GO:0043039: tRNA aminoacylation	1.27E-04
7	GO:0090506: axillary shoot meristem initiation	2.17E-04
8	GO:0010088: phloem development	3.17E-04
9	GO:0016556: mRNA modification	3.17E-04
10	GO:0042991: transcription factor import into nucleus	4.24E-04
11	GO:0048359: mucilage metabolic process involved in seed coat development	5.39E-04
12	GO:0015995: chlorophyll biosynthetic process	5.66E-04
13	GO:0009635: response to herbicide	6.60E-04
14	GO:0010304: PSII associated light-harvesting complex II catabolic process	6.60E-04
15	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.60E-04
16	GO:0016554: cytidine to uridine editing	6.60E-04
17	GO:0006828: manganese ion transport	6.60E-04
18	GO:0048444: floral organ morphogenesis	7.87E-04
19	GO:0010067: procambium histogenesis	7.87E-04
20	GO:0015979: photosynthesis	9.42E-04
21	GO:0048564: photosystem I assembly	1.06E-03
22	GO:0032544: plastid translation	1.20E-03
23	GO:0010206: photosystem II repair	1.35E-03
24	GO:0010205: photoinhibition	1.50E-03
25	GO:1900865: chloroplast RNA modification	1.50E-03
26	GO:0010192: mucilage biosynthetic process	1.67E-03
27	GO:0006816: calcium ion transport	1.84E-03
28	GO:0006415: translational termination	1.84E-03
29	GO:0010223: secondary shoot formation	2.38E-03
30	GO:0009934: regulation of meristem structural organization	2.38E-03
31	GO:0007034: vacuolar transport	2.38E-03
32	GO:0019762: glucosinolate catabolic process	2.76E-03
33	GO:0009768: photosynthesis, light harvesting in photosystem I	3.16E-03
34	GO:0051302: regulation of cell division	3.16E-03
35	GO:0006418: tRNA aminoacylation for protein translation	3.16E-03
36	GO:0080092: regulation of pollen tube growth	3.59E-03
37	GO:0001944: vasculature development	3.80E-03
38	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	3.80E-03
39	GO:0010089: xylem development	4.03E-03
40	GO:0016117: carotenoid biosynthetic process	4.26E-03
41	GO:0010087: phloem or xylem histogenesis	4.49E-03
42	GO:0009658: chloroplast organization	4.91E-03
43	GO:0048825: cotyledon development	5.21E-03
44	GO:0030163: protein catabolic process	5.97E-03
45	GO:0009828: plant-type cell wall loosening	6.23E-03
46	GO:0010027: thylakoid membrane organization	7.04E-03
47	GO:0045454: cell redox homeostasis	7.27E-03
48	GO:0018298: protein-chromophore linkage	8.46E-03
49	GO:0010218: response to far red light	9.06E-03
50	GO:0009407: toxin catabolic process	9.06E-03
51	GO:0008152: metabolic process	9.89E-03
52	GO:0009637: response to blue light	9.99E-03
53	GO:0009873: ethylene-activated signaling pathway	1.16E-02
54	GO:0010114: response to red light	1.19E-02
55	GO:0009664: plant-type cell wall organization	1.40E-02
56	GO:0009736: cytokinin-activated signaling pathway	1.47E-02
57	GO:0016310: phosphorylation	2.02E-02
58	GO:0040008: regulation of growth	2.70E-02
59	GO:0010150: leaf senescence	2.79E-02
60	GO:0007623: circadian rhythm	2.79E-02
61	GO:0009451: RNA modification	2.84E-02
62	GO:0042742: defense response to bacterium	3.24E-02
63	GO:0009826: unidimensional cell growth	3.71E-02
64	GO:0009860: pollen tube growth	4.02E-02
65	GO:0009409: response to cold	4.37E-02
66	GO:0080167: response to karrikin	4.44E-02
67	GO:0016192: vesicle-mediated transport	4.60E-02
68	GO:0046777: protein autophosphorylation	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
4	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
5	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
6	GO:0051920: peroxiredoxin activity	1.10E-05
7	GO:0016209: antioxidant activity	2.02E-05
8	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	5.18E-05
9	GO:0004560: alpha-L-fucosidase activity	5.18E-05
10	GO:0004831: tyrosine-tRNA ligase activity	5.18E-05
11	GO:0016630: protochlorophyllide reductase activity	1.27E-04
12	GO:0070402: NADPH binding	2.17E-04
13	GO:0016149: translation release factor activity, codon specific	3.17E-04
14	GO:0004659: prenyltransferase activity	4.24E-04
15	GO:0016773: phosphotransferase activity, alcohol group as acceptor	5.39E-04
16	GO:0003959: NADPH dehydrogenase activity	5.39E-04
17	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	7.87E-04
18	GO:0051753: mannan synthase activity	7.87E-04
19	GO:0004033: aldo-keto reductase (NADP) activity	1.06E-03
20	GO:0003747: translation release factor activity	1.35E-03
21	GO:0004519: endonuclease activity	1.43E-03
22	GO:0005384: manganese ion transmembrane transporter activity	1.50E-03
23	GO:0030234: enzyme regulator activity	1.67E-03
24	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.84E-03
25	GO:0015095: magnesium ion transmembrane transporter activity	2.19E-03
26	GO:0004565: beta-galactosidase activity	2.19E-03
27	GO:0031409: pigment binding	2.76E-03
28	GO:0004176: ATP-dependent peptidase activity	3.37E-03
29	GO:0033612: receptor serine/threonine kinase binding	3.37E-03
30	GO:0004812: aminoacyl-tRNA ligase activity	4.26E-03
31	GO:0005102: receptor binding	4.26E-03
32	GO:0004601: peroxidase activity	4.91E-03
33	GO:0008237: metallopeptidase activity	6.49E-03
34	GO:0016168: chlorophyll binding	7.31E-03
35	GO:0004222: metalloendopeptidase activity	9.06E-03
36	GO:0003746: translation elongation factor activity	9.99E-03
37	GO:0016301: kinase activity	1.05E-02
38	GO:0004364: glutathione transferase activity	1.16E-02
39	GO:0043621: protein self-association	1.26E-02
40	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.70E-02
41	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.77E-02
42	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.77E-02
43	GO:0003779: actin binding	1.85E-02
44	GO:0003723: RNA binding	2.73E-02
45	GO:0008194: UDP-glycosyltransferase activity	3.03E-02
46	GO:0016757: transferase activity, transferring glycosyl groups	3.05E-02
47	GO:0042802: identical protein binding	3.31E-02
48	GO:0016788: hydrolase activity, acting on ester bonds	3.86E-02
49	GO:0016491: oxidoreductase activity	4.25E-02
50	GO:0052689: carboxylic ester hydrolase activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.65E-07
2	GO:0009941: chloroplast envelope	3.37E-05
3	GO:0009535: chloroplast thylakoid membrane	1.85E-04
4	GO:0005853: eukaryotic translation elongation factor 1 complex	2.17E-04
5	GO:0009534: chloroplast thylakoid	5.69E-04
6	GO:0000793: condensed chromosome	6.60E-04
7	GO:0000815: ESCRT III complex	7.87E-04
8	GO:0000794: condensed nuclear chromosome	9.18E-04
9	GO:0009533: chloroplast stromal thylakoid	9.18E-04
10	GO:0043231: intracellular membrane-bounded organelle	1.46E-03
11	GO:0016324: apical plasma membrane	1.67E-03
12	GO:0000311: plastid large ribosomal subunit	2.01E-03
13	GO:0010287: plastoglobule	2.20E-03
14	GO:0030076: light-harvesting complex	2.56E-03
15	GO:0009522: photosystem I	4.96E-03
16	GO:0031969: chloroplast membrane	6.08E-03
17	GO:0010319: stromule	6.49E-03
18	GO:0009505: plant-type cell wall	8.64E-03
19	GO:0048046: apoplast	8.71E-03
20	GO:0009706: chloroplast inner membrane	1.89E-02
21	GO:0009543: chloroplast thylakoid lumen	2.22E-02
22	GO:0005615: extracellular space	3.03E-02
23	GO:0046658: anchored component of plasma membrane	3.41E-02
24	GO:0009536: plastid	3.96E-02
25	GO:0000139: Golgi membrane	4.37E-02