Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G13840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043457: regulation of cellular respiration0.00E+00
2GO:0033206: meiotic cytokinesis4.26E-06
3GO:0006808: regulation of nitrogen utilization4.83E-05
4GO:0045038: protein import into chloroplast thylakoid membrane6.40E-05
5GO:0048497: maintenance of floral organ identity6.40E-05
6GO:0048316: seed development7.18E-05
7GO:0009913: epidermal cell differentiation8.11E-05
8GO:0003006: developmental process involved in reproduction8.11E-05
9GO:2000033: regulation of seed dormancy process9.94E-05
10GO:0006614: SRP-dependent cotranslational protein targeting to membrane1.19E-04
11GO:0009772: photosynthetic electron transport in photosystem II1.19E-04
12GO:0009938: negative regulation of gibberellic acid mediated signaling pathway1.39E-04
13GO:0006605: protein targeting1.39E-04
14GO:0032508: DNA duplex unwinding1.39E-04
15GO:0010233: phloem transport1.60E-04
16GO:0000373: Group II intron splicing1.83E-04
17GO:0009737: response to abscisic acid3.27E-04
18GO:0010207: photosystem II assembly3.28E-04
19GO:0009863: salicylic acid mediated signaling pathway4.07E-04
20GO:0010187: negative regulation of seed germination4.07E-04
21GO:2000377: regulation of reactive oxygen species metabolic process4.07E-04
22GO:0009269: response to desiccation4.63E-04
23GO:0040007: growth5.20E-04
24GO:0048443: stamen development5.49E-04
25GO:0009958: positive gravitropism6.38E-04
26GO:0048825: cotyledon development6.99E-04
27GO:0010027: thylakoid membrane organization9.24E-04
28GO:0010029: regulation of seed germination9.59E-04
29GO:0010311: lateral root formation1.13E-03
30GO:0010218: response to far red light1.17E-03
31GO:0009631: cold acclimation1.20E-03
32GO:0009867: jasmonic acid mediated signaling pathway1.28E-03
33GO:0009414: response to water deprivation1.48E-03
34GO:0042538: hyperosmotic salinity response1.75E-03
35GO:0009740: gibberellic acid mediated signaling pathway2.23E-03
36GO:0009845: seed germination2.85E-03
37GO:0010228: vegetative to reproductive phase transition of meristem3.46E-03
38GO:0009739: response to gibberellin3.62E-03
39GO:0009723: response to ethylene4.99E-03
40GO:0006355: regulation of transcription, DNA-templated8.10E-03
41GO:0009416: response to light stimulus1.02E-02
42GO:0009409: response to cold2.09E-02
43GO:0005975: carbohydrate metabolic process2.27E-02
44GO:0007275: multicellular organism development2.73E-02
45GO:0007165: signal transduction2.85E-02
46GO:0016310: phosphorylation3.20E-02
47GO:0016567: protein ubiquitination3.73E-02
48GO:0009651: response to salt stress4.00E-02
RankGO TermAdjusted P value
1GO:0000989: transcription factor activity, transcription factor binding1.83E-04
2GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity2.29E-04
3GO:0005525: GTP binding1.24E-03
4GO:0003697: single-stranded DNA binding1.28E-03
5GO:0003690: double-stranded DNA binding1.88E-03
6GO:0005515: protein binding2.87E-03
7GO:0003676: nucleic acid binding6.11E-03
8GO:0004871: signal transducer activity6.12E-03
9GO:0043565: sequence-specific DNA binding7.59E-03
10GO:0008289: lipid binding8.62E-03
11GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.24E-02
12GO:0005509: calcium ion binding1.59E-02
13GO:0003700: transcription factor activity, sequence-specific DNA binding1.96E-02
14GO:0003729: mRNA binding2.24E-02
15GO:0016787: hydrolase activity2.90E-02
16GO:0008270: zinc ion binding3.79E-02
17GO:0016757: transferase activity, transferring glycosyl groups4.04E-02
RankGO TermAdjusted P value
1GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.60E-04
2GO:0005578: proteinaceous extracellular matrix3.02E-04
3GO:0009507: chloroplast1.45E-03
4GO:0009534: chloroplast thylakoid1.17E-02
5GO:0005802: trans-Golgi network1.43E-02
6GO:0005768: endosome1.56E-02
7GO:0009505: plant-type cell wall1.98E-02
8GO:0009506: plasmodesma1.98E-02
9GO:0005730: nucleolus2.45E-02
10GO:0009535: chloroplast thylakoid membrane3.00E-02
11GO:0048046: apoplast4.24E-02
12GO:0005618: cell wall4.51E-02
13GO:0005886: plasma membrane4.90E-02
Gene type



Gene DE type