co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G13630

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071260: cellular response to mechanical stimulus	0.00E+00
2	GO:0070070: proton-transporting V-type ATPase complex assembly	0.00E+00
3	GO:0043171: peptide catabolic process	0.00E+00
4	GO:0042906: xanthine transport	0.00E+00
5	GO:0010378: temperature compensation of the circadian clock	0.00E+00
6	GO:0071311: cellular response to acetate	0.00E+00
7	GO:0000380: alternative mRNA splicing, via spliceosome	5.95E-05
8	GO:1990641: response to iron ion starvation	2.29E-04
9	GO:1902265: abscisic acid homeostasis	2.29E-04
10	GO:0015812: gamma-aminobutyric acid transport	2.29E-04
11	GO:0006816: calcium ion transport	4.90E-04
12	GO:0006611: protein export from nucleus	5.10E-04
13	GO:0015857: uracil transport	5.10E-04
14	GO:0030259: lipid glycosylation	5.10E-04
15	GO:0006101: citrate metabolic process	5.10E-04
16	GO:0030003: cellular cation homeostasis	5.10E-04
17	GO:0015914: phospholipid transport	5.10E-04
18	GO:0015720: allantoin transport	5.10E-04
19	GO:0042256: mature ribosome assembly	8.29E-04
20	GO:0042344: indole glucosinolate catabolic process	8.29E-04
21	GO:0006954: inflammatory response	8.29E-04
22	GO:0071705: nitrogen compound transport	8.29E-04
23	GO:0071230: cellular response to amino acid stimulus	8.29E-04
24	GO:0090630: activation of GTPase activity	8.29E-04
25	GO:0000055: ribosomal large subunit export from nucleus	8.29E-04
26	GO:0042542: response to hydrogen peroxide	9.46E-04
27	GO:0006874: cellular calcium ion homeostasis	1.08E-03
28	GO:0009768: photosynthesis, light harvesting in photosystem I	1.08E-03
29	GO:0070072: vacuolar proton-transporting V-type ATPase complex assembly	1.18E-03
30	GO:0015749: monosaccharide transport	1.18E-03
31	GO:1901332: negative regulation of lateral root development	1.18E-03
32	GO:0009409: response to cold	1.31E-03
33	GO:0015743: malate transport	1.57E-03
34	GO:1903830: magnesium ion transmembrane transport	1.57E-03
35	GO:0010600: regulation of auxin biosynthetic process	1.57E-03
36	GO:0006646: phosphatidylethanolamine biosynthetic process	1.57E-03
37	GO:0009687: abscisic acid metabolic process	1.57E-03
38	GO:0048578: positive regulation of long-day photoperiodism, flowering	2.01E-03
39	GO:0006656: phosphatidylcholine biosynthetic process	2.01E-03
40	GO:0007029: endoplasmic reticulum organization	2.01E-03
41	GO:0048544: recognition of pollen	2.06E-03
42	GO:0080167: response to karrikin	2.17E-03
43	GO:0009416: response to light stimulus	2.39E-03
44	GO:0042732: D-xylose metabolic process	2.48E-03
45	GO:0007035: vacuolar acidification	2.48E-03
46	GO:0000741: karyogamy	2.48E-03
47	GO:0071333: cellular response to glucose stimulus	2.97E-03
48	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.97E-03
49	GO:0010286: heat acclimation	3.04E-03
50	GO:0009651: response to salt stress	3.37E-03
51	GO:0009769: photosynthesis, light harvesting in photosystem II	3.50E-03
52	GO:0009645: response to low light intensity stimulus	3.50E-03
53	GO:0006333: chromatin assembly or disassembly	3.50E-03
54	GO:0015693: magnesium ion transport	3.50E-03
55	GO:0010044: response to aluminum ion	3.50E-03
56	GO:0009737: response to abscisic acid	3.52E-03
57	GO:0009061: anaerobic respiration	4.06E-03
58	GO:0010928: regulation of auxin mediated signaling pathway	4.06E-03
59	GO:0009819: drought recovery	4.06E-03
60	GO:0006491: N-glycan processing	4.06E-03
61	GO:0009415: response to water	4.06E-03
62	GO:0032508: DNA duplex unwinding	4.06E-03
63	GO:0006102: isocitrate metabolic process	4.06E-03
64	GO:0009817: defense response to fungus, incompatible interaction	4.44E-03
65	GO:0018298: protein-chromophore linkage	4.44E-03
66	GO:0007623: circadian rhythm	4.51E-03
67	GO:0009827: plant-type cell wall modification	4.65E-03
68	GO:0001510: RNA methylation	4.65E-03
69	GO:0006811: ion transport	4.89E-03
70	GO:0010119: regulation of stomatal movement	5.13E-03
71	GO:0010043: response to zinc ion	5.13E-03
72	GO:0006098: pentose-phosphate shunt	5.27E-03
73	GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	5.27E-03
74	GO:0046916: cellular transition metal ion homeostasis	5.27E-03
75	GO:0045087: innate immune response	5.62E-03
76	GO:0030042: actin filament depolymerization	5.91E-03
77	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.91E-03
78	GO:0008202: steroid metabolic process	5.91E-03
79	GO:0030001: metal ion transport	6.41E-03
80	GO:0010629: negative regulation of gene expression	6.58E-03
81	GO:0009970: cellular response to sulfate starvation	6.58E-03
82	GO:0055062: phosphate ion homeostasis	6.58E-03
83	GO:0006995: cellular response to nitrogen starvation	6.58E-03
84	GO:0009641: shade avoidance	6.58E-03
85	GO:0009682: induced systemic resistance	7.28E-03
86	GO:0052544: defense response by callose deposition in cell wall	7.28E-03
87	GO:0008643: carbohydrate transport	7.84E-03
88	GO:0016925: protein sumoylation	8.00E-03
89	GO:0006970: response to osmotic stress	8.63E-03
90	GO:2000012: regulation of auxin polar transport	8.75E-03
91	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	8.75E-03
92	GO:0006807: nitrogen compound metabolic process	8.75E-03
93	GO:0000165: MAPK cascade	8.78E-03
94	GO:0007034: vacuolar transport	9.52E-03
95	GO:0007015: actin filament organization	9.52E-03
96	GO:0009585: red, far-red light phototransduction	9.78E-03
97	GO:0007165: signal transduction	1.01E-02
98	GO:0035556: intracellular signal transduction	1.02E-02
99	GO:0019853: L-ascorbic acid biosynthetic process	1.03E-02
100	GO:0010030: positive regulation of seed germination	1.03E-02
101	GO:0034976: response to endoplasmic reticulum stress	1.11E-02
102	GO:0044550: secondary metabolite biosynthetic process	1.15E-02
103	GO:0006406: mRNA export from nucleus	1.20E-02
104	GO:0009695: jasmonic acid biosynthetic process	1.28E-02
105	GO:0006825: copper ion transport	1.28E-02
106	GO:0003333: amino acid transmembrane transport	1.37E-02
107	GO:0048511: rhythmic process	1.37E-02
108	GO:0019748: secondary metabolic process	1.46E-02
109	GO:0009693: ethylene biosynthetic process	1.56E-02
110	GO:0071215: cellular response to abscisic acid stimulus	1.56E-02
111	GO:0010227: floral organ abscission	1.56E-02
112	GO:0006012: galactose metabolic process	1.56E-02
113	GO:0019722: calcium-mediated signaling	1.65E-02
114	GO:0005975: carbohydrate metabolic process	1.69E-02
115	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.75E-02
116	GO:0070417: cellular response to cold	1.75E-02
117	GO:0051028: mRNA transport	1.75E-02
118	GO:0015991: ATP hydrolysis coupled proton transport	1.85E-02
119	GO:0042631: cellular response to water deprivation	1.85E-02
120	GO:0042391: regulation of membrane potential	1.85E-02
121	GO:0080022: primary root development	1.85E-02
122	GO:0034220: ion transmembrane transport	1.85E-02
123	GO:0010501: RNA secondary structure unwinding	1.85E-02
124	GO:0000413: protein peptidyl-prolyl isomerization	1.85E-02
125	GO:0010051: xylem and phloem pattern formation	1.85E-02
126	GO:0006520: cellular amino acid metabolic process	1.95E-02
127	GO:0010197: polar nucleus fusion	1.95E-02
128	GO:0046323: glucose import	1.95E-02
129	GO:0009646: response to absence of light	2.05E-02
130	GO:0015986: ATP synthesis coupled proton transport	2.05E-02
131	GO:0006814: sodium ion transport	2.05E-02
132	GO:0042752: regulation of circadian rhythm	2.05E-02
133	GO:0008654: phospholipid biosynthetic process	2.16E-02
134	GO:0006635: fatty acid beta-oxidation	2.27E-02
135	GO:1901657: glycosyl compound metabolic process	2.48E-02
136	GO:0019760: glucosinolate metabolic process	2.60E-02
137	GO:0009414: response to water deprivation	2.60E-02
138	GO:0010468: regulation of gene expression	2.89E-02
139	GO:0009617: response to bacterium	2.89E-02
140	GO:0010029: regulation of seed germination	3.06E-02
141	GO:0048573: photoperiodism, flowering	3.31E-02
142	GO:0006950: response to stress	3.31E-02
143	GO:0016049: cell growth	3.43E-02
144	GO:0048481: plant ovule development	3.56E-02
145	GO:0009834: plant-type secondary cell wall biogenesis	3.81E-02
146	GO:0055114: oxidation-reduction process	3.81E-02
147	GO:0010218: response to far red light	3.81E-02
148	GO:0009631: cold acclimation	3.94E-02
149	GO:0016051: carbohydrate biosynthetic process	4.21E-02
150	GO:0009637: response to blue light	4.21E-02
151	GO:0006099: tricarboxylic acid cycle	4.34E-02
152	GO:0006897: endocytosis	4.76E-02
153	GO:0006457: protein folding	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0080083: beta-gentiobiose beta-glucosidase activity	0.00E+00
2	GO:0005272: sodium channel activity	0.00E+00
3	GO:0042907: xanthine transmembrane transporter activity	0.00E+00
4	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
5	GO:0047787: delta4-3-oxosteroid 5beta-reductase activity	0.00E+00
6	GO:0009045: xylose isomerase activity	0.00E+00
7	GO:0004567: beta-mannosidase activity	0.00E+00
8	GO:0080082: esculin beta-glucosidase activity	0.00E+00
9	GO:0005358: high-affinity hydrogen:glucose symporter activity	0.00E+00
10	GO:0015276: ligand-gated ion channel activity	0.00E+00
11	GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity	0.00E+00
12	GO:0016428: tRNA (cytosine-5-)-methyltransferase activity	0.00E+00
13	GO:0047668: amygdalin beta-glucosidase activity	0.00E+00
14	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
15	GO:0009679: hexose:proton symporter activity	2.29E-04
16	GO:0035671: enone reductase activity	2.29E-04
17	GO:0010013: N-1-naphthylphthalamic acid binding	2.29E-04
18	GO:0080079: cellobiose glucosidase activity	2.29E-04
19	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.29E-04
20	GO:0046870: cadmium ion binding	2.29E-04
21	GO:0008066: glutamate receptor activity	2.29E-04
22	GO:0070006: metalloaminopeptidase activity	2.29E-04
23	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	2.29E-04
24	GO:0030275: LRR domain binding	2.29E-04
25	GO:0004177: aminopeptidase activity	4.90E-04
26	GO:0003994: aconitate hydratase activity	5.10E-04
27	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	5.10E-04
28	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	5.10E-04
29	GO:0004352: glutamate dehydrogenase (NAD+) activity	5.10E-04
30	GO:0015180: L-alanine transmembrane transporter activity	5.10E-04
31	GO:0004353: glutamate dehydrogenase [NAD(P)+] activity	5.10E-04
32	GO:0032791: lead ion binding	5.10E-04
33	GO:0005274: allantoin uptake transmembrane transporter activity	5.10E-04
34	GO:0004609: phosphatidylserine decarboxylase activity	5.10E-04
35	GO:0005262: calcium channel activity	6.36E-04
36	GO:0050897: cobalt ion binding	6.46E-04
37	GO:0005217: intracellular ligand-gated ion channel activity	8.00E-04
38	GO:0004970: ionotropic glutamate receptor activity	8.00E-04
39	GO:0019948: SUMO activating enzyme activity	8.29E-04
40	GO:0019829: cation-transporting ATPase activity	8.29E-04
41	GO:0017150: tRNA dihydrouridine synthase activity	8.29E-04
42	GO:0004096: catalase activity	8.29E-04
43	GO:0031409: pigment binding	8.89E-04
44	GO:0015189: L-lysine transmembrane transporter activity	1.18E-03
45	GO:0048027: mRNA 5'-UTR binding	1.18E-03
46	GO:0004707: MAP kinase activity	1.18E-03
47	GO:0015181: arginine transmembrane transporter activity	1.18E-03
48	GO:0030527: structural constituent of chromatin	1.18E-03
49	GO:0043023: ribosomal large subunit binding	1.18E-03
50	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.18E-03
51	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.18E-03
52	GO:0004300: enoyl-CoA hydratase activity	1.18E-03
53	GO:0015210: uracil transmembrane transporter activity	1.57E-03
54	GO:0005313: L-glutamate transmembrane transporter activity	1.57E-03
55	GO:0008526: phosphatidylinositol transporter activity	1.57E-03
56	GO:0005253: anion channel activity	1.57E-03
57	GO:0042277: peptide binding	1.57E-03
58	GO:0010294: abscisic acid glucosyltransferase activity	2.01E-03
59	GO:0015145: monosaccharide transmembrane transporter activity	2.01E-03
60	GO:0045300: acyl-[acyl-carrier-protein] desaturase activity	2.01E-03
61	GO:0000293: ferric-chelate reductase activity	2.48E-03
62	GO:0019137: thioglucosidase activity	2.48E-03
63	GO:0051117: ATPase binding	2.48E-03
64	GO:0070300: phosphatidic acid binding	2.97E-03
65	GO:0005261: cation channel activity	2.97E-03
66	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.10E-03
67	GO:0015140: malate transmembrane transporter activity	3.50E-03
68	GO:0016168: chlorophyll binding	3.60E-03
69	GO:0102483: scopolin beta-glucosidase activity	4.01E-03
70	GO:0004033: aldo-keto reductase (NADP) activity	4.06E-03
71	GO:0004525: ribonuclease III activity	4.06E-03
72	GO:0005267: potassium channel activity	4.65E-03
73	GO:0005375: copper ion transmembrane transporter activity	4.65E-03
74	GO:0000989: transcription factor activity, transcription factor binding	5.27E-03
75	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	5.27E-03
76	GO:0008422: beta-glucosidase activity	6.14E-03
77	GO:0015020: glucuronosyltransferase activity	6.58E-03
78	GO:0016301: kinase activity	6.81E-03
79	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.28E-03
80	GO:0004565: beta-galactosidase activity	8.75E-03
81	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.75E-03
82	GO:0015095: magnesium ion transmembrane transporter activity	8.75E-03
83	GO:0031624: ubiquitin conjugating enzyme binding	9.52E-03
84	GO:0030553: cGMP binding	1.03E-02
85	GO:0004497: monooxygenase activity	1.03E-02
86	GO:0030552: cAMP binding	1.03E-02
87	GO:0031625: ubiquitin protein ligase binding	1.08E-02
88	GO:0005216: ion channel activity	1.28E-02
89	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.43E-02
90	GO:0005507: copper ion binding	1.60E-02
91	GO:0019825: oxygen binding	1.60E-02
92	GO:0003756: protein disulfide isomerase activity	1.65E-02
93	GO:0020037: heme binding	1.81E-02
94	GO:0030551: cyclic nucleotide binding	1.85E-02
95	GO:0005249: voltage-gated potassium channel activity	1.85E-02
96	GO:0046873: metal ion transmembrane transporter activity	1.95E-02
97	GO:0008270: zinc ion binding	2.25E-02
98	GO:0015297: antiporter activity	2.31E-02
99	GO:0005351: sugar:proton symporter activity	2.36E-02
100	GO:0005506: iron ion binding	2.63E-02
101	GO:0008375: acetylglucosaminyltransferase activity	3.19E-02
102	GO:0030247: polysaccharide binding	3.31E-02
103	GO:0046872: metal ion binding	3.35E-02
104	GO:0046982: protein heterodimerization activity	3.67E-02
105	GO:0005096: GTPase activator activity	3.68E-02
106	GO:0003697: single-stranded DNA binding	4.21E-02
107	GO:0004842: ubiquitin-protein transferase activity	4.31E-02
108	GO:0051539: 4 iron, 4 sulfur cluster binding	4.62E-02
109	GO:0003729: mRNA binding	4.79E-02
110	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.88E-02
111	GO:0030246: carbohydrate binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	8.04E-06
2	GO:0005777: peroxisome	1.78E-04
3	GO:0012510: trans-Golgi network transport vesicle membrane	2.29E-04
4	GO:0032777: Piccolo NuA4 histone acetyltransferase complex	5.10E-04
5	GO:0030076: light-harvesting complex	8.00E-04
6	GO:0005886: plasma membrane	1.08E-03
7	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.57E-03
8	GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain	2.01E-03
9	GO:0009522: photosystem I	2.06E-03
10	GO:0016020: membrane	2.41E-03
11	GO:0005851: eukaryotic translation initiation factor 2B complex	2.48E-03
12	GO:0000815: ESCRT III complex	2.97E-03
13	GO:0005783: endoplasmic reticulum	3.06E-03
14	GO:0005773: vacuole	3.83E-03
15	GO:0030131: clathrin adaptor complex	4.06E-03
16	GO:0000151: ubiquitin ligase complex	4.44E-03
17	GO:0031090: organelle membrane	5.27E-03
18	GO:0000786: nucleosome	5.37E-03
19	GO:0030125: clathrin vesicle coat	6.58E-03
20	GO:0031966: mitochondrial membrane	9.11E-03
21	GO:0042651: thylakoid membrane	1.28E-02
22	GO:0005618: cell wall	1.34E-02
23	GO:0005905: clathrin-coated pit	1.37E-02
24	GO:0015629: actin cytoskeleton	1.56E-02
25	GO:0010287: plastoglobule	1.66E-02
26	GO:0009506: plasmodesma	1.68E-02
27	GO:0005654: nucleoplasm	1.70E-02
28	GO:0005794: Golgi apparatus	1.76E-02
29	GO:0031965: nuclear membrane	2.16E-02
30	GO:0009523: photosystem II	2.16E-02
31	GO:0005768: endosome	2.31E-02
32	GO:0000785: chromatin	2.37E-02
33	GO:0005829: cytosol	2.38E-02
34	GO:0009705: plant-type vacuole membrane	2.42E-02
35	GO:0009505: plant-type cell wall	3.75E-02
36	GO:0000325: plant-type vacuole	3.94E-02