co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G13010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030644: cellular chloride ion homeostasis	0.00E+00
2	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
3	GO:0009892: negative regulation of metabolic process	0.00E+00
4	GO:0051928: positive regulation of calcium ion transport	0.00E+00
5	GO:0009877: nodulation	0.00E+00
6	GO:0044550: secondary metabolite biosynthetic process	3.77E-05
7	GO:0015812: gamma-aminobutyric acid transport	9.14E-05
8	GO:0035494: SNARE complex disassembly	9.14E-05
9	GO:1902884: positive regulation of response to oxidative stress	2.16E-04
10	GO:0030259: lipid glycosylation	2.16E-04
11	GO:0000256: allantoin catabolic process	2.16E-04
12	GO:0035335: peptidyl-tyrosine dephosphorylation	2.16E-04
13	GO:0006883: cellular sodium ion homeostasis	2.16E-04
14	GO:0048255: mRNA stabilization	2.16E-04
15	GO:0003333: amino acid transmembrane transport	3.47E-04
16	GO:0010136: ureide catabolic process	3.61E-04
17	GO:1901562: response to paraquat	3.61E-04
18	GO:0045165: cell fate commitment	3.61E-04
19	GO:1902448: positive regulation of shade avoidance	3.61E-04
20	GO:0009800: cinnamic acid biosynthetic process	5.20E-04
21	GO:1901332: negative regulation of lateral root development	5.20E-04
22	GO:0006145: purine nucleobase catabolic process	5.20E-04
23	GO:0009963: positive regulation of flavonoid biosynthetic process	5.20E-04
24	GO:1901002: positive regulation of response to salt stress	6.90E-04
25	GO:0015846: polyamine transport	6.90E-04
26	GO:0042594: response to starvation	6.90E-04
27	GO:2000306: positive regulation of photomorphogenesis	6.90E-04
28	GO:0016123: xanthophyll biosynthetic process	8.73E-04
29	GO:0009957: epidermal cell fate specification	8.73E-04
30	GO:0010286: heat acclimation	8.83E-04
31	GO:0007623: circadian rhythm	9.06E-04
32	GO:0002238: response to molecule of fungal origin	1.07E-03
33	GO:0045962: positive regulation of development, heterochronic	1.07E-03
34	GO:0000741: karyogamy	1.07E-03
35	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.27E-03
36	GO:0010044: response to aluminum ion	1.49E-03
37	GO:0032880: regulation of protein localization	1.49E-03
38	GO:0010078: maintenance of root meristem identity	1.72E-03
39	GO:0009061: anaerobic respiration	1.72E-03
40	GO:0034765: regulation of ion transmembrane transport	2.21E-03
41	GO:0042538: hyperosmotic salinity response	2.56E-03
42	GO:0055062: phosphate ion homeostasis	2.75E-03
43	GO:0006535: cysteine biosynthetic process from serine	2.75E-03
44	GO:0009688: abscisic acid biosynthetic process	2.75E-03
45	GO:0009970: cellular response to sulfate starvation	2.75E-03
46	GO:0009809: lignin biosynthetic process	2.75E-03
47	GO:0046856: phosphatidylinositol dephosphorylation	3.03E-03
48	GO:0009408: response to heat	3.33E-03
49	GO:0006355: regulation of transcription, DNA-templated	3.41E-03
50	GO:0050826: response to freezing	3.63E-03
51	GO:0018107: peptidyl-threonine phosphorylation	3.63E-03
52	GO:0090351: seedling development	4.26E-03
53	GO:0034976: response to endoplasmic reticulum stress	4.58E-03
54	GO:0006351: transcription, DNA-templated	4.67E-03
55	GO:0019344: cysteine biosynthetic process	4.92E-03
56	GO:0010026: trichome differentiation	5.27E-03
57	GO:0048511: rhythmic process	5.62E-03
58	GO:0010431: seed maturation	5.62E-03
59	GO:0045492: xylan biosynthetic process	6.73E-03
60	GO:0009416: response to light stimulus	6.89E-03
61	GO:0010197: polar nucleus fusion	7.91E-03
62	GO:0010182: sugar mediated signaling pathway	7.91E-03
63	GO:0010154: fruit development	7.91E-03
64	GO:0061025: membrane fusion	8.32E-03
65	GO:0006623: protein targeting to vacuole	8.74E-03
66	GO:0006914: autophagy	1.05E-02
67	GO:0019760: glucosinolate metabolic process	1.05E-02
68	GO:0010252: auxin homeostasis	1.05E-02
69	GO:0006970: response to osmotic stress	1.12E-02
70	GO:0009723: response to ethylene	1.20E-02
71	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.23E-02
72	GO:0080167: response to karrikin	1.29E-02
73	GO:0048573: photoperiodism, flowering	1.33E-02
74	GO:0016192: vesicle-mediated transport	1.36E-02
75	GO:0048481: plant ovule development	1.43E-02
76	GO:0009813: flavonoid biosynthetic process	1.48E-02
77	GO:0010043: response to zinc ion	1.59E-02
78	GO:0006886: intracellular protein transport	1.59E-02
79	GO:0009637: response to blue light	1.69E-02
80	GO:0009751: response to salicylic acid	1.88E-02
81	GO:0030154: cell differentiation	1.88E-02
82	GO:0010114: response to red light	2.03E-02
83	GO:0009640: photomorphogenesis	2.03E-02
84	GO:0009644: response to high light intensity	2.14E-02
85	GO:0008643: carbohydrate transport	2.14E-02
86	GO:0009965: leaf morphogenesis	2.20E-02
87	GO:0000165: MAPK cascade	2.32E-02
88	GO:0009409: response to cold	2.47E-02
89	GO:0006813: potassium ion transport	2.51E-02
90	GO:0006357: regulation of transcription from RNA polymerase II promoter	2.53E-02
91	GO:0051603: proteolysis involved in cellular protein catabolic process	2.57E-02
92	GO:0009909: regulation of flower development	2.70E-02
93	GO:0048316: seed development	2.89E-02
94	GO:0009620: response to fungus	3.02E-02
95	GO:0018105: peptidyl-serine phosphorylation	3.29E-02
96	GO:0006396: RNA processing	3.29E-02
97	GO:0035556: intracellular signal transduction	3.57E-02
98	GO:0009058: biosynthetic process	3.93E-02
99	GO:0006457: protein folding	4.36E-02
100	GO:0040008: regulation of growth	4.60E-02
101	GO:0010228: vegetative to reproductive phase transition of meristem	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0050511: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity	0.00E+00
2	GO:0019912: cyclin-dependent protein kinase activating kinase activity	0.00E+00
3	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
4	GO:0047205: quinate O-hydroxycinnamoyltransferase activity	0.00E+00
5	GO:0047172: shikimate O-hydroxycinnamoyltransferase activity	0.00E+00
6	GO:0015185: gamma-aminobutyric acid transmembrane transporter activity	9.14E-05
7	GO:0005244: voltage-gated ion channel activity	9.14E-05
8	GO:0017091: AU-rich element binding	9.14E-05
9	GO:0015180: L-alanine transmembrane transporter activity	2.16E-04
10	GO:0080045: quercetin 3'-O-glucosyltransferase activity	2.16E-04
11	GO:0016314: phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity	2.16E-04
12	GO:0005483: soluble NSF attachment protein activity	3.61E-04
13	GO:0004848: ureidoglycolate hydrolase activity	3.61E-04
14	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.61E-04
15	GO:0009001: serine O-acetyltransferase activity	5.20E-04
16	GO:0015189: L-lysine transmembrane transporter activity	5.20E-04
17	GO:0015181: arginine transmembrane transporter activity	5.20E-04
18	GO:0015203: polyamine transmembrane transporter activity	5.20E-04
19	GO:0052866: phosphatidylinositol phosphate phosphatase activity	5.20E-04
20	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	6.28E-04
21	GO:0019905: syntaxin binding	6.90E-04
22	GO:0005313: L-glutamate transmembrane transporter activity	6.90E-04
23	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	8.73E-04
24	GO:0002020: protease binding	8.73E-04
25	GO:0080046: quercetin 4'-O-glucosyltransferase activity	1.07E-03
26	GO:0070300: phosphatidic acid binding	1.27E-03
27	GO:0016621: cinnamoyl-CoA reductase activity	1.49E-03
28	GO:0004525: ribonuclease III activity	1.72E-03
29	GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity	1.96E-03
30	GO:0005267: potassium channel activity	1.96E-03
31	GO:0004497: monooxygenase activity	2.04E-03
32	GO:0071949: FAD binding	2.21E-03
33	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	2.21E-03
34	GO:0019825: oxygen binding	2.28E-03
35	GO:0015174: basic amino acid transmembrane transporter activity	2.48E-03
36	GO:0004177: aminopeptidase activity	3.03E-03
37	GO:0008081: phosphoric diester hydrolase activity	3.63E-03
38	GO:0005506: iron ion binding	3.79E-03
39	GO:0005515: protein binding	4.09E-03
40	GO:0003712: transcription cofactor activity	4.26E-03
41	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.32E-03
42	GO:0004725: protein tyrosine phosphatase activity	4.58E-03
43	GO:0004707: MAP kinase activity	5.62E-03
44	GO:0015297: antiporter activity	6.40E-03
45	GO:0003756: protein disulfide isomerase activity	6.73E-03
46	GO:0020037: heme binding	7.76E-03
47	GO:0030276: clathrin binding	7.91E-03
48	GO:0050662: coenzyme binding	8.32E-03
49	GO:0008237: metallopeptidase activity	1.09E-02
50	GO:0008233: peptidase activity	1.27E-02
51	GO:0003677: DNA binding	1.52E-02
52	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.54E-02
53	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	1.54E-02
54	GO:0050897: cobalt ion binding	1.59E-02
55	GO:0044212: transcription regulatory region DNA binding	1.69E-02
56	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.69E-02
57	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	1.72E-02
58	GO:0035091: phosphatidylinositol binding	2.14E-02
59	GO:0015293: symporter activity	2.20E-02
60	GO:0015171: amino acid transmembrane transporter activity	2.70E-02
61	GO:0031625: ubiquitin protein ligase binding	2.70E-02
62	GO:0045735: nutrient reservoir activity	2.82E-02
63	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.02E-02
64	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.02E-02
65	GO:0016874: ligase activity	3.09E-02
66	GO:0008270: zinc ion binding	4.13E-02
67	GO:0043565: sequence-specific DNA binding	4.44E-02
68	GO:0005351: sugar:proton symporter activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0009898: cytoplasmic side of plasma membrane	6.90E-04
2	GO:0032586: protein storage vacuole membrane	6.90E-04
3	GO:0000326: protein storage vacuole	1.96E-03
4	GO:0034045: pre-autophagosomal structure membrane	1.96E-03
5	GO:0005884: actin filament	3.03E-03
6	GO:0030136: clathrin-coated vesicle	7.11E-03
7	GO:0005770: late endosome	7.91E-03
8	GO:0016020: membrane	9.21E-03
9	GO:0005829: cytosol	1.22E-02
10	GO:0031969: chloroplast membrane	1.29E-02
11	GO:0000151: ubiquitin ligase complex	1.43E-02
12	GO:0019005: SCF ubiquitin ligase complex	1.43E-02
13	GO:0005773: vacuole	1.58E-02
14	GO:0031201: SNARE complex	1.91E-02
15	GO:0016021: integral component of membrane	2.15E-02
16	GO:0031966: mitochondrial membrane	2.38E-02
17	GO:0005783: endoplasmic reticulum	2.51E-02
18	GO:0005634: nucleus	2.58E-02
19	GO:0005887: integral component of plasma membrane	2.59E-02
20	GO:0009506: plasmodesma	2.87E-02
21	GO:0010287: plastoglobule	3.64E-02