co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006793: phosphorus metabolic process	0.00E+00
2	GO:0034050: host programmed cell death induced by symbiont	0.00E+00
3	GO:0070328: triglyceride homeostasis	0.00E+00
4	GO:0045792: negative regulation of cell size	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0055091: phospholipid homeostasis	0.00E+00
7	GO:0030149: sphingolipid catabolic process	0.00E+00
8	GO:0009617: response to bacterium	2.34E-11
9	GO:0009626: plant-type hypersensitive response	4.71E-07
10	GO:0006952: defense response	1.33E-06
11	GO:0019725: cellular homeostasis	1.41E-06
12	GO:0010200: response to chitin	2.04E-06
13	GO:0009266: response to temperature stimulus	1.86E-05
14	GO:0060548: negative regulation of cell death	2.25E-05
15	GO:0009611: response to wounding	4.12E-05
16	GO:0051707: response to other organism	5.38E-05
17	GO:0009270: response to humidity	1.71E-04
18	GO:0060862: negative regulation of floral organ abscission	1.71E-04
19	GO:1900424: regulation of defense response to bacterium	1.71E-04
20	GO:0080093: regulation of photorespiration	1.71E-04
21	GO:0031998: regulation of fatty acid beta-oxidation	1.71E-04
22	GO:0009609: response to symbiotic bacterium	1.71E-04
23	GO:0046685: response to arsenic-containing substance	1.98E-04
24	GO:0009816: defense response to bacterium, incompatible interaction	2.37E-04
25	GO:0042742: defense response to bacterium	2.55E-04
26	GO:0008219: cell death	3.14E-04
27	GO:0019752: carboxylic acid metabolic process	3.87E-04
28	GO:0031349: positive regulation of defense response	3.87E-04
29	GO:0046475: glycerophospholipid catabolic process	3.87E-04
30	GO:0045905: positive regulation of translational termination	3.87E-04
31	GO:0051592: response to calcium ion	3.87E-04
32	GO:0045901: positive regulation of translational elongation	3.87E-04
33	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	3.87E-04
34	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.87E-04
35	GO:0055088: lipid homeostasis	3.87E-04
36	GO:0006452: translational frameshifting	3.87E-04
37	GO:0009751: response to salicylic acid	4.05E-04
38	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.32E-04
39	GO:0034051: negative regulation of plant-type hypersensitive response	6.32E-04
40	GO:1900140: regulation of seedling development	6.32E-04
41	GO:0045793: positive regulation of cell size	6.32E-04
42	GO:0010351: lithium ion transport	6.32E-04
43	GO:0010186: positive regulation of cellular defense response	6.32E-04
44	GO:0048281: inflorescence morphogenesis	6.32E-04
45	GO:0031348: negative regulation of defense response	8.69E-04
46	GO:0002679: respiratory burst involved in defense response	9.04E-04
47	GO:0006882: cellular zinc ion homeostasis	9.04E-04
48	GO:0046836: glycolipid transport	9.04E-04
49	GO:0055089: fatty acid homeostasis	9.04E-04
50	GO:0048194: Golgi vesicle budding	9.04E-04
51	GO:0043207: response to external biotic stimulus	9.04E-04
52	GO:0034440: lipid oxidation	1.20E-03
53	GO:0080037: negative regulation of cytokinin-activated signaling pathway	1.20E-03
54	GO:0048638: regulation of developmental growth	1.20E-03
55	GO:0009652: thigmotropism	1.20E-03
56	GO:0045727: positive regulation of translation	1.20E-03
57	GO:2000762: regulation of phenylpropanoid metabolic process	1.52E-03
58	GO:0045487: gibberellin catabolic process	1.52E-03
59	GO:0006097: glyoxylate cycle	1.52E-03
60	GO:0009697: salicylic acid biosynthetic process	1.52E-03
61	GO:0010193: response to ozone	1.57E-03
62	GO:0030163: protein catabolic process	1.78E-03
63	GO:0010337: regulation of salicylic acid metabolic process	1.87E-03
64	GO:0009117: nucleotide metabolic process	1.87E-03
65	GO:0010942: positive regulation of cell death	1.87E-03
66	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.87E-03
67	GO:0006796: phosphate-containing compound metabolic process	1.87E-03
68	GO:0009409: response to cold	1.89E-03
69	GO:0009408: response to heat	2.07E-03
70	GO:0009094: L-phenylalanine biosynthetic process	2.24E-03
71	GO:0009423: chorismate biosynthetic process	2.24E-03
72	GO:0010555: response to mannitol	2.24E-03
73	GO:0080086: stamen filament development	2.24E-03
74	GO:2000067: regulation of root morphogenesis	2.24E-03
75	GO:0030643: cellular phosphate ion homeostasis	2.24E-03
76	GO:0009612: response to mechanical stimulus	2.24E-03
77	GO:0009615: response to virus	2.26E-03
78	GO:0040008: regulation of growth	2.50E-03
79	GO:0009627: systemic acquired resistance	2.52E-03
80	GO:0030026: cellular manganese ion homeostasis	2.64E-03
81	GO:0050829: defense response to Gram-negative bacterium	2.64E-03
82	GO:0009610: response to symbiotic fungus	2.64E-03
83	GO:0006955: immune response	2.64E-03
84	GO:0070370: cellular heat acclimation	2.64E-03
85	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.64E-03
86	GO:0030162: regulation of proteolysis	3.06E-03
87	GO:0031540: regulation of anthocyanin biosynthetic process	3.06E-03
88	GO:0006102: isocitrate metabolic process	3.06E-03
89	GO:0007186: G-protein coupled receptor signaling pathway	3.50E-03
90	GO:0010262: somatic embryogenesis	3.50E-03
91	GO:0010497: plasmodesmata-mediated intercellular transport	3.50E-03
92	GO:0006099: tricarboxylic acid cycle	3.88E-03
93	GO:0051865: protein autoubiquitination	3.95E-03
94	GO:0006979: response to oxidative stress	3.99E-03
95	GO:0030042: actin filament depolymerization	4.44E-03
96	GO:2000280: regulation of root development	4.44E-03
97	GO:0006032: chitin catabolic process	4.93E-03
98	GO:0055062: phosphate ion homeostasis	4.93E-03
99	GO:0009299: mRNA transcription	4.93E-03
100	GO:0009073: aromatic amino acid family biosynthetic process	5.45E-03
101	GO:0015770: sucrose transport	5.45E-03
102	GO:0000272: polysaccharide catabolic process	5.45E-03
103	GO:0009750: response to fructose	5.45E-03
104	GO:0048229: gametophyte development	5.45E-03
105	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	5.98E-03
106	GO:0012501: programmed cell death	5.98E-03
107	GO:0006820: anion transport	5.98E-03
108	GO:0015706: nitrate transport	5.98E-03
109	GO:0080167: response to karrikin	6.06E-03
110	GO:0006108: malate metabolic process	6.54E-03
111	GO:0046777: protein autophosphorylation	6.61E-03
112	GO:0010224: response to UV-B	6.66E-03
113	GO:0007034: vacuolar transport	7.11E-03
114	GO:0034605: cellular response to heat	7.11E-03
115	GO:0002237: response to molecule of bacterial origin	7.11E-03
116	GO:0070588: calcium ion transmembrane transport	7.69E-03
117	GO:0046854: phosphatidylinositol phosphorylation	7.69E-03
118	GO:0009969: xyloglucan biosynthetic process	7.69E-03
119	GO:0010167: response to nitrate	7.69E-03
120	GO:0009901: anther dehiscence	7.69E-03
121	GO:0046688: response to copper ion	7.69E-03
122	GO:0006511: ubiquitin-dependent protein catabolic process	7.89E-03
123	GO:0006071: glycerol metabolic process	8.30E-03
124	GO:0000162: tryptophan biosynthetic process	8.30E-03
125	GO:0046686: response to cadmium ion	8.54E-03
126	GO:0006468: protein phosphorylation	8.81E-03
127	GO:0000027: ribosomal large subunit assembly	8.92E-03
128	GO:0009863: salicylic acid mediated signaling pathway	8.92E-03
129	GO:0009624: response to nematode	9.16E-03
130	GO:0009695: jasmonic acid biosynthetic process	9.56E-03
131	GO:0006825: copper ion transport	9.56E-03
132	GO:0006874: cellular calcium ion homeostasis	9.56E-03
133	GO:0016998: cell wall macromolecule catabolic process	1.02E-02
134	GO:0061077: chaperone-mediated protein folding	1.02E-02
135	GO:0031408: oxylipin biosynthetic process	1.02E-02
136	GO:0035428: hexose transmembrane transport	1.09E-02
137	GO:0016226: iron-sulfur cluster assembly	1.09E-02
138	GO:0009411: response to UV	1.16E-02
139	GO:0040007: growth	1.16E-02
140	GO:0001944: vasculature development	1.16E-02
141	GO:0009686: gibberellin biosynthetic process	1.16E-02
142	GO:0010091: trichome branching	1.23E-02
143	GO:0042391: regulation of membrane potential	1.37E-02
144	GO:0048653: anther development	1.37E-02
145	GO:0046323: glucose import	1.45E-02
146	GO:0006520: cellular amino acid metabolic process	1.45E-02
147	GO:0006814: sodium ion transport	1.52E-02
148	GO:0009646: response to absence of light	1.52E-02
149	GO:0010150: leaf senescence	1.59E-02
150	GO:0009749: response to glucose	1.60E-02
151	GO:0008654: phospholipid biosynthetic process	1.60E-02
152	GO:0010183: pollen tube guidance	1.60E-02
153	GO:0006891: intra-Golgi vesicle-mediated transport	1.68E-02
154	GO:0032502: developmental process	1.76E-02
155	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.78E-02
156	GO:0007166: cell surface receptor signaling pathway	1.82E-02
157	GO:1901657: glycosyl compound metabolic process	1.84E-02
158	GO:0009639: response to red or far red light	1.93E-02
159	GO:0051607: defense response to virus	2.10E-02
160	GO:0001666: response to hypoxia	2.18E-02
161	GO:0042128: nitrate assimilation	2.36E-02
162	GO:0009832: plant-type cell wall biogenesis	2.73E-02
163	GO:0006811: ion transport	2.83E-02
164	GO:0010043: response to zinc ion	2.93E-02
165	GO:0007568: aging	2.93E-02
166	GO:0048527: lateral root development	2.93E-02
167	GO:0045087: innate immune response	3.12E-02
168	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.16E-02
169	GO:0044550: secondary metabolite biosynthetic process	3.32E-02
170	GO:0042542: response to hydrogen peroxide	3.64E-02
171	GO:0010114: response to red light	3.74E-02
172	GO:0009744: response to sucrose	3.74E-02
173	GO:0008283: cell proliferation	3.74E-02
174	GO:0008643: carbohydrate transport	3.96E-02
175	GO:0009965: leaf morphogenesis	4.06E-02
176	GO:0006855: drug transmembrane transport	4.17E-02
177	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.29E-02
178	GO:0031347: regulation of defense response	4.29E-02
179	GO:0006812: cation transport	4.40E-02
180	GO:0006486: protein glycosylation	4.62E-02
181	GO:0051603: proteolysis involved in cellular protein catabolic process	4.74E-02
182	GO:0008152: metabolic process	4.94E-02
183	GO:0009909: regulation of flower development	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0004107: chorismate synthase activity	0.00E+00
2	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
3	GO:0042171: lysophosphatidic acid acyltransferase activity	0.00E+00
4	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
5	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
6	GO:0004298: threonine-type endopeptidase activity	4.40E-05
7	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.30E-04
8	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.71E-04
9	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	1.71E-04
10	GO:0004048: anthranilate phosphoribosyltransferase activity	1.71E-04
11	GO:0004338: glucan exo-1,3-beta-glucosidase activity	3.87E-04
12	GO:0004385: guanylate kinase activity	3.87E-04
13	GO:0045543: gibberellin 2-beta-dioxygenase activity	3.87E-04
14	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	3.87E-04
15	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	3.87E-04
16	GO:0004190: aspartic-type endopeptidase activity	5.37E-04
17	GO:0005524: ATP binding	6.04E-04
18	GO:0031683: G-protein beta/gamma-subunit complex binding	6.32E-04
19	GO:0016165: linoleate 13S-lipoxygenase activity	6.32E-04
20	GO:0001664: G-protein coupled receptor binding	6.32E-04
21	GO:0016531: copper chaperone activity	6.32E-04
22	GO:0051287: NAD binding	7.53E-04
23	GO:0000287: magnesium ion binding	8.11E-04
24	GO:0004449: isocitrate dehydrogenase (NAD+) activity	9.04E-04
25	GO:0017089: glycolipid transporter activity	9.04E-04
26	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	9.04E-04
27	GO:0035529: NADH pyrophosphatase activity	9.04E-04
28	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	1.20E-03
29	GO:0015368: calcium:cation antiporter activity	1.20E-03
30	GO:0047769: arogenate dehydratase activity	1.20E-03
31	GO:0004664: prephenate dehydratase activity	1.20E-03
32	GO:0051861: glycolipid binding	1.20E-03
33	GO:0015369: calcium:proton antiporter activity	1.20E-03
34	GO:0004623: phospholipase A2 activity	1.52E-03
35	GO:0000104: succinate dehydrogenase activity	1.52E-03
36	GO:0047631: ADP-ribose diphosphatase activity	1.52E-03
37	GO:0015145: monosaccharide transmembrane transporter activity	1.52E-03
38	GO:0016462: pyrophosphatase activity	1.87E-03
39	GO:0016615: malate dehydrogenase activity	1.87E-03
40	GO:0030976: thiamine pyrophosphate binding	1.87E-03
41	GO:0008420: CTD phosphatase activity	1.87E-03
42	GO:0000210: NAD+ diphosphatase activity	1.87E-03
43	GO:0030060: L-malate dehydrogenase activity	2.24E-03
44	GO:0004012: phospholipid-translocating ATPase activity	2.24E-03
45	GO:0005516: calmodulin binding	2.34E-03
46	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.64E-03
47	GO:0016831: carboxy-lyase activity	2.64E-03
48	GO:0008506: sucrose:proton symporter activity	2.64E-03
49	GO:0004427: inorganic diphosphatase activity	2.64E-03
50	GO:0005544: calcium-dependent phospholipid binding	3.06E-03
51	GO:0043022: ribosome binding	3.06E-03
52	GO:0015491: cation:cation antiporter activity	3.06E-03
53	GO:0004564: beta-fructofuranosidase activity	3.06E-03
54	GO:0015288: porin activity	3.06E-03
55	GO:0004430: 1-phosphatidylinositol 4-kinase activity	3.50E-03
56	GO:0008308: voltage-gated anion channel activity	3.50E-03
57	GO:0003746: translation elongation factor activity	3.71E-03
58	GO:0008417: fucosyltransferase activity	3.95E-03
59	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.95E-03
60	GO:0005515: protein binding	4.23E-03
61	GO:0015112: nitrate transmembrane transporter activity	4.44E-03
62	GO:0004575: sucrose alpha-glucosidase activity	4.44E-03
63	GO:0004568: chitinase activity	4.93E-03
64	GO:0015020: glucuronosyltransferase activity	4.93E-03
65	GO:0004713: protein tyrosine kinase activity	4.93E-03
66	GO:0043531: ADP binding	5.19E-03
67	GO:0005543: phospholipid binding	5.45E-03
68	GO:0008233: peptidase activity	5.94E-03
69	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	6.54E-03
70	GO:0005262: calcium channel activity	6.54E-03
71	GO:0005388: calcium-transporting ATPase activity	6.54E-03
72	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.11E-03
73	GO:0031625: ubiquitin protein ligase binding	7.12E-03
74	GO:0030552: cAMP binding	7.69E-03
75	GO:0030553: cGMP binding	7.69E-03
76	GO:0008061: chitin binding	7.69E-03
77	GO:0003712: transcription cofactor activity	7.69E-03
78	GO:0004871: signal transducer activity	8.09E-03
79	GO:0004725: protein tyrosine phosphatase activity	8.30E-03
80	GO:0080043: quercetin 3-O-glucosyltransferase activity	8.37E-03
81	GO:0080044: quercetin 7-O-glucosyltransferase activity	8.37E-03
82	GO:0043424: protein histidine kinase binding	9.56E-03
83	GO:0005216: ion channel activity	9.56E-03
84	GO:0033612: receptor serine/threonine kinase binding	1.02E-02
85	GO:0016301: kinase activity	1.02E-02
86	GO:0016758: transferase activity, transferring hexosyl groups	1.12E-02
87	GO:0022891: substrate-specific transmembrane transporter activity	1.16E-02
88	GO:0008810: cellulase activity	1.16E-02
89	GO:0005509: calcium ion binding	1.28E-02
90	GO:0005249: voltage-gated potassium channel activity	1.37E-02
91	GO:0030551: cyclic nucleotide binding	1.37E-02
92	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.48E-02
93	GO:0010181: FMN binding	1.52E-02
94	GO:0005355: glucose transmembrane transporter activity	1.52E-02
95	GO:0016887: ATPase activity	1.74E-02
96	GO:0008194: UDP-glycosyltransferase activity	1.78E-02
97	GO:0016597: amino acid binding	2.10E-02
98	GO:0004674: protein serine/threonine kinase activity	2.32E-02
99	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.36E-02
100	GO:0030247: polysaccharide binding	2.45E-02
101	GO:0004683: calmodulin-dependent protein kinase activity	2.45E-02
102	GO:0102483: scopolin beta-glucosidase activity	2.45E-02
103	GO:0004721: phosphoprotein phosphatase activity	2.45E-02
104	GO:0015238: drug transmembrane transporter activity	2.73E-02
105	GO:0004222: metalloendopeptidase activity	2.83E-02
106	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.92E-02
107	GO:0030145: manganese ion binding	2.93E-02
108	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.93E-02
109	GO:0050897: cobalt ion binding	2.93E-02
110	GO:0000987: core promoter proximal region sequence-specific DNA binding	3.22E-02
111	GO:0016757: transferase activity, transferring glycosyl groups	3.23E-02
112	GO:0008422: beta-glucosidase activity	3.33E-02
113	GO:0046872: metal ion binding	3.73E-02
114	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.94E-02
115	GO:0051537: 2 iron, 2 sulfur cluster binding	3.96E-02
116	GO:0016298: lipase activity	4.74E-02
117	GO:0009055: electron carrier activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	6.18E-08
2	GO:0005758: mitochondrial intermembrane space	3.22E-05
3	GO:0005839: proteasome core complex	4.40E-05
4	GO:0019773: proteasome core complex, alpha-subunit complex	1.62E-04
5	GO:0031351: integral component of plastid membrane	1.71E-04
6	GO:0005774: vacuolar membrane	4.19E-04
7	GO:0005741: mitochondrial outer membrane	7.97E-04
8	GO:0000502: proteasome complex	8.60E-04
9	GO:0005618: cell wall	1.82E-03
10	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	3.06E-03
11	GO:0046930: pore complex	3.50E-03
12	GO:0005773: vacuole	3.65E-03
13	GO:0048046: apoplast	4.48E-03
14	GO:0005740: mitochondrial envelope	4.93E-03
15	GO:0005829: cytosol	5.20E-03
16	GO:0009506: plasmodesma	5.41E-03
17	GO:0009536: plastid	5.63E-03
18	GO:0031012: extracellular matrix	6.54E-03
19	GO:0005795: Golgi stack	7.69E-03
20	GO:0005834: heterotrimeric G-protein complex	8.11E-03
21	GO:0070469: respiratory chain	9.56E-03
22	GO:0031225: anchored component of membrane	9.73E-03
23	GO:0015935: small ribosomal subunit	1.02E-02
24	GO:0015629: actin cytoskeleton	1.16E-02
25	GO:0005887: integral component of plasma membrane	1.47E-02
26	GO:0032580: Golgi cisterna membrane	1.93E-02
27	GO:0046658: anchored component of plasma membrane	2.11E-02
28	GO:0005643: nuclear pore	2.64E-02
29	GO:0019005: SCF ubiquitin ligase complex	2.64E-02
30	GO:0000151: ubiquitin ligase complex	2.64E-02
31	GO:0016020: membrane	2.85E-02
32	GO:0009507: chloroplast	3.09E-02
33	GO:0090406: pollen tube	3.74E-02
34	GO:0005622: intracellular	4.21E-02
35	GO:0005783: endoplasmic reticulum	4.41E-02