co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006793: phosphorus metabolic process	0.00E+00
2	GO:0051238: sequestering of metal ion	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
5	GO:0046865: terpenoid transport	0.00E+00
6	GO:0042742: defense response to bacterium	6.00E-09
7	GO:0071456: cellular response to hypoxia	2.06E-08
8	GO:0009617: response to bacterium	6.10E-06
9	GO:0006032: chitin catabolic process	7.32E-06
10	GO:0002237: response to molecule of bacterial origin	1.86E-05
11	GO:0009697: salicylic acid biosynthetic process	3.65E-05
12	GO:0006468: protein phosphorylation	3.75E-05
13	GO:0030091: protein repair	1.30E-04
14	GO:0042759: long-chain fatty acid biosynthetic process	1.71E-04
15	GO:0015760: glucose-6-phosphate transport	1.71E-04
16	GO:1990641: response to iron ion starvation	1.71E-04
17	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.71E-04
18	GO:0033306: phytol metabolic process	1.71E-04
19	GO:0010112: regulation of systemic acquired resistance	1.98E-04
20	GO:0009817: defense response to fungus, incompatible interaction	3.14E-04
21	GO:0000272: polysaccharide catabolic process	3.25E-04
22	GO:0009682: induced systemic resistance	3.25E-04
23	GO:0009407: toxin catabolic process	3.58E-04
24	GO:0006101: citrate metabolic process	3.87E-04
25	GO:0051592: response to calcium ion	3.87E-04
26	GO:0048569: post-embryonic animal organ development	3.87E-04
27	GO:0090057: root radial pattern formation	3.87E-04
28	GO:0044419: interspecies interaction between organisms	3.87E-04
29	GO:0031349: positive regulation of defense response	3.87E-04
30	GO:0015712: hexose phosphate transport	3.87E-04
31	GO:0009751: response to salicylic acid	4.05E-04
32	GO:0010150: leaf senescence	4.28E-04
33	GO:0006952: defense response	4.93E-04
34	GO:0070588: calcium ion transmembrane transport	5.37E-04
35	GO:0051707: response to other organism	5.92E-04
36	GO:0015714: phosphoenolpyruvate transport	6.32E-04
37	GO:0080168: abscisic acid transport	6.32E-04
38	GO:0071367: cellular response to brassinosteroid stimulus	6.32E-04
39	GO:0080055: low-affinity nitrate transport	6.32E-04
40	GO:0035436: triose phosphate transmembrane transport	6.32E-04
41	GO:0010351: lithium ion transport	6.32E-04
42	GO:0010272: response to silver ion	6.32E-04
43	GO:0015692: lead ion transport	6.32E-04
44	GO:0048281: inflorescence morphogenesis	6.32E-04
45	GO:0009636: response to toxic substance	6.86E-04
46	GO:0006855: drug transmembrane transport	7.19E-04
47	GO:0006874: cellular calcium ion homeostasis	7.27E-04
48	GO:0033014: tetrapyrrole biosynthetic process	9.04E-04
49	GO:0006882: cellular zinc ion homeostasis	9.04E-04
50	GO:0046513: ceramide biosynthetic process	9.04E-04
51	GO:0046836: glycolipid transport	9.04E-04
52	GO:0010116: positive regulation of abscisic acid biosynthetic process	9.04E-04
53	GO:0070301: cellular response to hydrogen peroxide	9.04E-04
54	GO:0010104: regulation of ethylene-activated signaling pathway	9.04E-04
55	GO:0050832: defense response to fungus	9.18E-04
56	GO:0006979: response to oxidative stress	1.05E-03
57	GO:0009626: plant-type hypersensitive response	1.14E-03
58	GO:1901002: positive regulation of response to salt stress	1.20E-03
59	GO:0080142: regulation of salicylic acid biosynthetic process	1.20E-03
60	GO:0010109: regulation of photosynthesis	1.20E-03
61	GO:0006536: glutamate metabolic process	1.20E-03
62	GO:0015713: phosphoglycerate transport	1.20E-03
63	GO:0009624: response to nematode	1.33E-03
64	GO:0000304: response to singlet oxygen	1.52E-03
65	GO:0006097: glyoxylate cycle	1.52E-03
66	GO:0034052: positive regulation of plant-type hypersensitive response	1.52E-03
67	GO:0010193: response to ozone	1.57E-03
68	GO:0060918: auxin transport	1.87E-03
69	GO:0002238: response to molecule of fungal origin	1.87E-03
70	GO:0009643: photosynthetic acclimation	1.87E-03
71	GO:0015691: cadmium ion transport	1.87E-03
72	GO:0051607: defense response to virus	2.14E-03
73	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.24E-03
74	GO:0009627: systemic acquired resistance	2.52E-03
75	GO:0030026: cellular manganese ion homeostasis	2.64E-03
76	GO:1902074: response to salt	2.64E-03
77	GO:0050829: defense response to Gram-negative bacterium	2.64E-03
78	GO:0008219: cell death	2.94E-03
79	GO:2000070: regulation of response to water deprivation	3.06E-03
80	GO:0006102: isocitrate metabolic process	3.06E-03
81	GO:0009787: regulation of abscisic acid-activated signaling pathway	3.06E-03
82	GO:0009642: response to light intensity	3.06E-03
83	GO:0001558: regulation of cell growth	3.50E-03
84	GO:0010120: camalexin biosynthetic process	3.50E-03
85	GO:0010204: defense response signaling pathway, resistance gene-independent	3.50E-03
86	GO:0006783: heme biosynthetic process	3.95E-03
87	GO:0019432: triglyceride biosynthetic process	3.95E-03
88	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.44E-03
89	GO:0042542: response to hydrogen peroxide	4.59E-03
90	GO:0009737: response to abscisic acid	4.61E-03
91	GO:0055062: phosphate ion homeostasis	4.93E-03
92	GO:0009870: defense response signaling pathway, resistance gene-dependent	4.93E-03
93	GO:0009089: lysine biosynthetic process via diaminopimelate	5.45E-03
94	GO:0015706: nitrate transport	5.98E-03
95	GO:0012501: programmed cell death	5.98E-03
96	GO:0002213: defense response to insect	5.98E-03
97	GO:0010200: response to chitin	6.33E-03
98	GO:0055046: microgametogenesis	6.54E-03
99	GO:0042343: indole glucosinolate metabolic process	7.69E-03
100	GO:0051302: regulation of cell division	9.56E-03
101	GO:0016998: cell wall macromolecule catabolic process	1.02E-02
102	GO:0098542: defense response to other organism	1.02E-02
103	GO:0031348: negative regulation of defense response	1.09E-02
104	GO:0071369: cellular response to ethylene stimulus	1.16E-02
105	GO:0010227: floral organ abscission	1.16E-02
106	GO:0071215: cellular response to abscisic acid stimulus	1.16E-02
107	GO:0006817: phosphate ion transport	1.23E-02
108	GO:0009561: megagametogenesis	1.23E-02
109	GO:0042631: cellular response to water deprivation	1.37E-02
110	GO:0009958: positive gravitropism	1.45E-02
111	GO:0048544: recognition of pollen	1.52E-02
112	GO:0006814: sodium ion transport	1.52E-02
113	GO:0042752: regulation of circadian rhythm	1.52E-02
114	GO:0040008: regulation of growth	1.52E-02
115	GO:0009749: response to glucose	1.60E-02
116	GO:0000302: response to reactive oxygen species	1.68E-02
117	GO:0002229: defense response to oomycetes	1.68E-02
118	GO:0010252: auxin homeostasis	1.93E-02
119	GO:0009615: response to virus	2.18E-02
120	GO:0009607: response to biotic stimulus	2.27E-02
121	GO:0009816: defense response to bacterium, incompatible interaction	2.27E-02
122	GO:0055114: oxidation-reduction process	2.34E-02
123	GO:0042128: nitrate assimilation	2.36E-02
124	GO:0015995: chlorophyll biosynthetic process	2.45E-02
125	GO:0016049: cell growth	2.55E-02
126	GO:0055085: transmembrane transport	2.78E-02
127	GO:0006499: N-terminal protein myristoylation	2.83E-02
128	GO:0007568: aging	2.93E-02
129	GO:0080167: response to karrikin	3.05E-02
130	GO:0045087: innate immune response	3.12E-02
131	GO:0009651: response to salt stress	3.16E-02
132	GO:0006099: tricarboxylic acid cycle	3.22E-02
133	GO:0044550: secondary metabolite biosynthetic process	3.32E-02
134	GO:0006631: fatty acid metabolic process	3.53E-02
135	GO:0045892: negative regulation of transcription, DNA-templated	3.71E-02
136	GO:0009744: response to sucrose	3.74E-02
137	GO:0006869: lipid transport	4.00E-02
138	GO:0031347: regulation of defense response	4.29E-02
139	GO:0032259: methylation	4.30E-02
140	GO:0006812: cation transport	4.40E-02
141	GO:0009846: pollen germination	4.40E-02
142	GO:0009809: lignin biosynthetic process	4.62E-02
143	GO:0009753: response to jasmonic acid	4.81E-02
144	GO:0006857: oligopeptide transport	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0003796: lysozyme activity	0.00E+00
2	GO:0035885: exochitinase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0008843: endochitinase activity	0.00E+00
5	GO:0004674: protein serine/threonine kinase activity	4.18E-06
6	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	7.58E-05
7	GO:0005516: calmodulin binding	1.20E-04
8	GO:0010285: L,L-diaminopimelate aminotransferase activity	1.71E-04
9	GO:0004325: ferrochelatase activity	1.71E-04
10	GO:0004568: chitinase activity	2.80E-04
11	GO:0016301: kinase activity	2.88E-04
12	GO:0050291: sphingosine N-acyltransferase activity	3.87E-04
13	GO:0003994: aconitate hydratase activity	3.87E-04
14	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.87E-04
15	GO:0005388: calcium-transporting ATPase activity	4.24E-04
16	GO:0008061: chitin binding	5.37E-04
17	GO:0004867: serine-type endopeptidase inhibitor activity	5.37E-04
18	GO:0004364: glutathione transferase activity	5.64E-04
19	GO:0071917: triose-phosphate transmembrane transporter activity	6.32E-04
20	GO:0080054: low-affinity nitrate transmembrane transporter activity	6.32E-04
21	GO:0004351: glutamate decarboxylase activity	9.04E-04
22	GO:0017089: glycolipid transporter activity	9.04E-04
23	GO:0043565: sequence-specific DNA binding	1.16E-03
24	GO:0010279: indole-3-acetic acid amido synthetase activity	1.20E-03
25	GO:0015120: phosphoglycerate transmembrane transporter activity	1.20E-03
26	GO:0015368: calcium:cation antiporter activity	1.20E-03
27	GO:0051861: glycolipid binding	1.20E-03
28	GO:0015369: calcium:proton antiporter activity	1.20E-03
29	GO:0005524: ATP binding	1.23E-03
30	GO:0008200: ion channel inhibitor activity	1.87E-03
31	GO:0004144: diacylglycerol O-acyltransferase activity	2.24E-03
32	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.24E-03
33	GO:0102391: decanoate--CoA ligase activity	2.24E-03
34	GO:0015297: antiporter activity	2.50E-03
35	GO:0004467: long-chain fatty acid-CoA ligase activity	2.64E-03
36	GO:0015491: cation:cation antiporter activity	3.06E-03
37	GO:0004033: aldo-keto reductase (NADP) activity	3.06E-03
38	GO:0015238: drug transmembrane transporter activity	3.08E-03
39	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.39E-03
40	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.60E-03
41	GO:0005215: transporter activity	4.70E-03
42	GO:0008171: O-methyltransferase activity	4.93E-03
43	GO:0008559: xenobiotic-transporting ATPase activity	5.45E-03
44	GO:0050660: flavin adenine dinucleotide binding	5.55E-03
45	GO:0004022: alcohol dehydrogenase (NAD) activity	6.54E-03
46	GO:0005315: inorganic phosphate transmembrane transporter activity	6.54E-03
47	GO:0004970: ionotropic glutamate receptor activity	7.69E-03
48	GO:0004190: aspartic-type endopeptidase activity	7.69E-03
49	GO:0005217: intracellular ligand-gated ion channel activity	7.69E-03
50	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	8.41E-03
51	GO:0008134: transcription factor binding	8.92E-03
52	GO:0009055: electron carrier activity	1.09E-02
53	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.23E-02
54	GO:0030170: pyridoxal phosphate binding	1.28E-02
55	GO:0008483: transaminase activity	2.01E-02
56	GO:0004683: calmodulin-dependent protein kinase activity	2.45E-02
57	GO:0030247: polysaccharide binding	2.45E-02
58	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.55E-02
59	GO:0030145: manganese ion binding	2.93E-02
60	GO:0019825: oxygen binding	3.20E-02
61	GO:0008422: beta-glucosidase activity	3.33E-02
62	GO:0052689: carboxylic ester hydrolase activity	3.37E-02
63	GO:0050661: NADP binding	3.43E-02
64	GO:0051539: 4 iron, 4 sulfur cluster binding	3.43E-02
65	GO:0015293: symporter activity	4.06E-02
66	GO:0005509: calcium ion binding	4.47E-02
67	GO:0005506: iron ion binding	4.84E-02
68	GO:0044212: transcription regulatory region DNA binding	4.93E-02
69	GO:0008234: cysteine-type peptidase activity	4.97E-02
70	GO:0045330: aspartyl esterase activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	6.02E-04
2	GO:0005886: plasma membrane	7.37E-04
3	GO:0030660: Golgi-associated vesicle membrane	1.20E-03
4	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.20E-03
5	GO:0031225: anchored component of membrane	2.49E-03
6	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.06E-03
7	GO:0000325: plant-type vacuole	3.39E-03
8	GO:0005576: extracellular region	4.02E-03
9	GO:0005765: lysosomal membrane	5.45E-03
10	GO:0031969: chloroplast membrane	6.06E-03
11	GO:0005770: late endosome	1.45E-02
12	GO:0005618: cell wall	1.54E-02
13	GO:0005783: endoplasmic reticulum	1.80E-02
14	GO:0071944: cell periphery	1.84E-02
15	GO:0046658: anchored component of plasma membrane	2.11E-02
16	GO:0005829: cytosol	3.79E-02
17	GO:0043231: intracellular membrane-bounded organelle	4.94E-02