co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G12040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010360: negative regulation of anion channel activity	0.00E+00
2	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
3	GO:0009991: response to extracellular stimulus	0.00E+00
4	GO:0006593: ornithine catabolic process	0.00E+00
5	GO:0032780: negative regulation of ATPase activity	0.00E+00
6	GO:0006482: protein demethylation	0.00E+00
7	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
8	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
9	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.64E-05
10	GO:0050790: regulation of catalytic activity	5.05E-05
11	GO:0019544: arginine catabolic process to glutamate	1.10E-04
12	GO:0071806: protein transmembrane transport	1.10E-04
13	GO:0080120: CAAX-box protein maturation	1.10E-04
14	GO:0071586: CAAX-box protein processing	1.10E-04
15	GO:0080173: male-female gamete recognition during double fertilization	1.10E-04
16	GO:1902361: mitochondrial pyruvate transmembrane transport	1.10E-04
17	GO:0034214: protein hexamerization	1.10E-04
18	GO:0006508: proteolysis	2.07E-04
19	GO:0055114: oxidation-reduction process	2.44E-04
20	GO:0006850: mitochondrial pyruvate transport	2.57E-04
21	GO:0015865: purine nucleotide transport	2.57E-04
22	GO:0007154: cell communication	2.57E-04
23	GO:0019441: tryptophan catabolic process to kynurenine	2.57E-04
24	GO:0009156: ribonucleoside monophosphate biosynthetic process	2.57E-04
25	GO:0015914: phospholipid transport	2.57E-04
26	GO:0015824: proline transport	2.57E-04
27	GO:0019521: D-gluconate metabolic process	2.57E-04
28	GO:0009266: response to temperature stimulus	2.61E-04
29	GO:0051707: response to other organism	2.70E-04
30	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.25E-04
31	GO:0051646: mitochondrion localization	4.25E-04
32	GO:0030433: ubiquitin-dependent ERAD pathway	4.85E-04
33	GO:0045454: cell redox homeostasis	6.01E-04
34	GO:0001676: long-chain fatty acid metabolic process	6.10E-04
35	GO:0046902: regulation of mitochondrial membrane permeability	6.10E-04
36	GO:0009165: nucleotide biosynthetic process	8.10E-04
37	GO:0006542: glutamine biosynthetic process	8.10E-04
38	GO:0006623: protein targeting to vacuole	8.23E-04
39	GO:0009651: response to salt stress	9.69E-04
40	GO:0030308: negative regulation of cell growth	1.02E-03
41	GO:0006464: cellular protein modification process	1.05E-03
42	GO:1900425: negative regulation of defense response to bacterium	1.25E-03
43	GO:0006014: D-ribose metabolic process	1.25E-03
44	GO:0006561: proline biosynthetic process	1.25E-03
45	GO:0070814: hydrogen sulfide biosynthetic process	1.25E-03
46	GO:0035435: phosphate ion transmembrane transport	1.25E-03
47	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.25E-03
48	GO:0009612: response to mechanical stimulus	1.49E-03
49	GO:0000911: cytokinesis by cell plate formation	1.49E-03
50	GO:0010038: response to metal ion	1.75E-03
51	GO:0006605: protein targeting	2.03E-03
52	GO:2000070: regulation of response to water deprivation	2.03E-03
53	GO:0016559: peroxisome fission	2.03E-03
54	GO:0009819: drought recovery	2.03E-03
55	GO:0030968: endoplasmic reticulum unfolded protein response	2.32E-03
56	GO:0009657: plastid organization	2.32E-03
57	GO:0006631: fatty acid metabolic process	2.41E-03
58	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.62E-03
59	GO:0090333: regulation of stomatal closure	2.62E-03
60	GO:0006098: pentose-phosphate shunt	2.62E-03
61	GO:2000280: regulation of root development	2.93E-03
62	GO:0000103: sulfate assimilation	3.25E-03
63	GO:0043069: negative regulation of programmed cell death	3.25E-03
64	GO:0006896: Golgi to vacuole transport	3.25E-03
65	GO:0019538: protein metabolic process	3.25E-03
66	GO:0072593: reactive oxygen species metabolic process	3.59E-03
67	GO:0018119: peptidyl-cysteine S-nitrosylation	3.59E-03
68	GO:0051603: proteolysis involved in cellular protein catabolic process	3.63E-03
69	GO:0071365: cellular response to auxin stimulus	3.93E-03
70	GO:0000266: mitochondrial fission	3.93E-03
71	GO:0006626: protein targeting to mitochondrion	4.30E-03
72	GO:0007034: vacuolar transport	4.66E-03
73	GO:0009887: animal organ morphogenesis	4.66E-03
74	GO:0008152: metabolic process	5.18E-03
75	GO:0006979: response to oxidative stress	5.76E-03
76	GO:0009116: nucleoside metabolic process	5.84E-03
77	GO:0030150: protein import into mitochondrial matrix	5.84E-03
78	GO:0031408: oxylipin biosynthetic process	6.67E-03
79	GO:0007005: mitochondrion organization	7.11E-03
80	GO:0080092: regulation of pollen tube growth	7.11E-03
81	GO:0015031: protein transport	8.18E-03
82	GO:0016117: carotenoid biosynthetic process	8.46E-03
83	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.46E-03
84	GO:0006662: glycerol ether metabolic process	9.41E-03
85	GO:0010154: fruit development	9.41E-03
86	GO:0061025: membrane fusion	9.91E-03
87	GO:0019252: starch biosynthetic process	1.04E-02
88	GO:0010183: pollen tube guidance	1.04E-02
89	GO:0002229: defense response to oomycetes	1.09E-02
90	GO:0030163: protein catabolic process	1.20E-02
91	GO:0051607: defense response to virus	1.36E-02
92	GO:0006511: ubiquitin-dependent protein catabolic process	1.40E-02
93	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.47E-02
94	GO:0009816: defense response to bacterium, incompatible interaction	1.47E-02
95	GO:0042128: nitrate assimilation	1.53E-02
96	GO:0009817: defense response to fungus, incompatible interaction	1.71E-02
97	GO:0046777: protein autophosphorylation	1.77E-02
98	GO:0048527: lateral root development	1.89E-02
99	GO:0006865: amino acid transport	1.96E-02
100	GO:0009867: jasmonic acid mediated signaling pathway	2.02E-02
101	GO:0034599: cellular response to oxidative stress	2.09E-02
102	GO:0006839: mitochondrial transport	2.22E-02
103	GO:0009644: response to high light intensity	2.56E-02
104	GO:0042538: hyperosmotic salinity response	2.85E-02
105	GO:0009809: lignin biosynthetic process	2.99E-02
106	GO:0006417: regulation of translation	3.22E-02
107	GO:0009626: plant-type hypersensitive response	3.53E-02
108	GO:0046686: response to cadmium ion	4.01E-02
109	GO:0009738: abscisic acid-activated signaling pathway	4.19E-02
110	GO:0009845: seed germination	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0051723: protein methylesterase activity	0.00E+00
2	GO:0042030: ATPase inhibitor activity	0.00E+00
3	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
4	GO:0004587: ornithine-oxo-acid transaminase activity	0.00E+00
5	GO:0009940: amino-terminal vacuolar sorting propeptide binding	0.00E+00
6	GO:0005496: steroid binding	1.75E-05
7	GO:0036402: proteasome-activating ATPase activity	2.64E-05
8	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.74E-05
9	GO:0010209: vacuolar sorting signal binding	1.10E-04
10	GO:0004061: arylformamidase activity	2.57E-04
11	GO:0015036: disulfide oxidoreductase activity	2.57E-04
12	GO:0016971: flavin-linked sulfhydryl oxidase activity	2.57E-04
13	GO:0004175: endopeptidase activity	2.61E-04
14	GO:0017025: TBP-class protein binding	2.94E-04
15	GO:0015193: L-proline transmembrane transporter activity	4.25E-04
16	GO:0004781: sulfate adenylyltransferase (ATP) activity	4.25E-04
17	GO:0008430: selenium binding	4.25E-04
18	GO:0050833: pyruvate transmembrane transporter activity	4.25E-04
19	GO:0035251: UDP-glucosyltransferase activity	4.43E-04
20	GO:0008234: cysteine-type peptidase activity	4.56E-04
21	GO:0004749: ribose phosphate diphosphokinase activity	6.10E-04
22	GO:0004416: hydroxyacylglutathione hydrolase activity	6.10E-04
23	GO:0047134: protein-disulfide reductase activity	6.19E-04
24	GO:0004791: thioredoxin-disulfide reductase activity	7.69E-04
25	GO:0009916: alternative oxidase activity	8.10E-04
26	GO:0004197: cysteine-type endopeptidase activity	9.34E-04
27	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.02E-03
28	GO:0005471: ATP:ADP antiporter activity	1.02E-03
29	GO:0004356: glutamate-ammonia ligase activity	1.02E-03
30	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.49E-03
31	GO:0102391: decanoate--CoA ligase activity	1.49E-03
32	GO:0004747: ribokinase activity	1.49E-03
33	GO:0016887: ATPase activity	1.59E-03
34	GO:0004467: long-chain fatty acid-CoA ligase activity	1.75E-03
35	GO:0102425: myricetin 3-O-glucosyltransferase activity	1.75E-03
36	GO:0102360: daphnetin 3-O-glucosyltransferase activity	1.75E-03
37	GO:0047893: flavonol 3-O-glucosyltransferase activity	2.03E-03
38	GO:0052747: sinapyl alcohol dehydrogenase activity	2.03E-03
39	GO:0008865: fructokinase activity	2.03E-03
40	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	2.62E-03
41	GO:0071949: FAD binding	2.62E-03
42	GO:0047617: acyl-CoA hydrolase activity	2.93E-03
43	GO:0005543: phospholipid binding	3.59E-03
44	GO:0008794: arsenate reductase (glutaredoxin) activity	3.59E-03
45	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.93E-03
46	GO:0005315: inorganic phosphate transmembrane transporter activity	4.30E-03
47	GO:0015266: protein channel activity	4.30E-03
48	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.55E-03
49	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.55E-03
50	GO:0003924: GTPase activity	4.57E-03
51	GO:0005509: calcium ion binding	5.03E-03
52	GO:0004190: aspartic-type endopeptidase activity	5.04E-03
53	GO:0015035: protein disulfide oxidoreductase activity	5.13E-03
54	GO:0003954: NADH dehydrogenase activity	5.84E-03
55	GO:0016758: transferase activity, transferring hexosyl groups	6.06E-03
56	GO:0051087: chaperone binding	6.25E-03
57	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.67E-03
58	GO:0008408: 3'-5' exonuclease activity	6.67E-03
59	GO:0003756: protein disulfide isomerase activity	8.00E-03
60	GO:0003727: single-stranded RNA binding	8.00E-03
61	GO:0008194: UDP-glycosyltransferase activity	9.62E-03
62	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.20E-02
63	GO:0016597: amino acid binding	1.36E-02
64	GO:0051213: dioxygenase activity	1.42E-02
65	GO:0005524: ATP binding	1.63E-02
66	GO:0008236: serine-type peptidase activity	1.65E-02
67	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.71E-02
68	GO:0004222: metalloendopeptidase activity	1.83E-02
69	GO:0003746: translation elongation factor activity	2.02E-02
70	GO:0005484: SNAP receptor activity	2.42E-02
71	GO:0005198: structural molecule activity	2.63E-02
72	GO:0015171: amino acid transmembrane transporter activity	3.22E-02
73	GO:0020037: heme binding	4.07E-02
74	GO:0030170: pyridoxal phosphate binding	4.86E-02
75	GO:0004252: serine-type endopeptidase activity	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0000502: proteasome complex	2.97E-05
4	GO:0031597: cytosolic proteasome complex	3.74E-05
5	GO:0031595: nuclear proteasome complex	5.05E-05
6	GO:0005829: cytosol	6.15E-05
7	GO:0031305: integral component of mitochondrial inner membrane	6.58E-05
8	GO:0031972: chloroplast intermembrane space	1.10E-04
9	GO:0008540: proteasome regulatory particle, base subcomplex	1.24E-04
10	GO:0017119: Golgi transport complex	1.48E-04
11	GO:0005773: vacuole	2.39E-04
12	GO:0031304: intrinsic component of mitochondrial inner membrane	2.57E-04
13	GO:0031314: extrinsic component of mitochondrial inner membrane	2.57E-04
14	GO:0005764: lysosome	2.61E-04
15	GO:0030139: endocytic vesicle	4.25E-04
16	GO:0005886: plasma membrane	4.78E-04
17	GO:0005777: peroxisome	4.95E-04
18	GO:0005783: endoplasmic reticulum	5.11E-04
19	GO:0000323: lytic vacuole	6.10E-04
20	GO:0032585: multivesicular body membrane	6.10E-04
21	GO:0005778: peroxisomal membrane	1.12E-03
22	GO:0005615: extracellular space	1.41E-03
23	GO:0009840: chloroplastic endopeptidase Clp complex	1.49E-03
24	GO:0030173: integral component of Golgi membrane	1.49E-03
25	GO:0031902: late endosome membrane	2.41E-03
26	GO:0031901: early endosome membrane	2.62E-03
27	GO:0030665: clathrin-coated vesicle membrane	2.93E-03
28	GO:0090404: pollen tube tip	3.59E-03
29	GO:0005743: mitochondrial inner membrane	4.17E-03
30	GO:0005622: intracellular	4.67E-03
31	GO:0030176: integral component of endoplasmic reticulum membrane	5.04E-03
32	GO:0005769: early endosome	5.44E-03
33	GO:0005794: Golgi apparatus	5.76E-03
34	GO:0070469: respiratory chain	6.25E-03
35	GO:0005623: cell	6.40E-03
36	GO:0005741: mitochondrial outer membrane	6.67E-03
37	GO:0009532: plastid stroma	6.67E-03
38	GO:0005744: mitochondrial inner membrane presequence translocase complex	8.00E-03
39	GO:0005770: late endosome	9.41E-03
40	GO:0009504: cell plate	1.04E-02
41	GO:0005802: trans-Golgi network	1.72E-02
42	GO:0005768: endosome	2.03E-02
43	GO:0043231: intracellular membrane-bounded organelle	2.70E-02
44	GO:0005887: integral component of plasma membrane	3.32E-02
45	GO:0000139: Golgi membrane	3.37E-02
46	GO:0010008: endosome membrane	3.45E-02
47	GO:0005834: heterotrimeric G-protein complex	3.53E-02
48	GO:0005789: endoplasmic reticulum membrane	3.91E-02