co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0035278: miRNA mediated inhibition of translation	0.00E+00
2	GO:0030581: symbiont intracellular protein transport in host	0.00E+00
3	GO:0000188: inactivation of MAPK activity	0.00E+00
4	GO:0016236: macroautophagy	0.00E+00
5	GO:0007160: cell-matrix adhesion	0.00E+00
6	GO:0080034: host response to induction by symbiont of tumor, nodule or growth in host	0.00E+00
7	GO:0048227: plasma membrane to endosome transport	0.00E+00
8	GO:0006888: ER to Golgi vesicle-mediated transport	3.40E-05
9	GO:0010265: SCF complex assembly	5.94E-05
10	GO:0030242: pexophagy	5.94E-05
11	GO:1990641: response to iron ion starvation	5.94E-05
12	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.13E-04
13	GO:0009846: pollen germination	1.19E-04
14	GO:0006101: citrate metabolic process	1.44E-04
15	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.44E-04
16	GO:0042325: regulation of phosphorylation	1.44E-04
17	GO:0031648: protein destabilization	1.44E-04
18	GO:0051258: protein polymerization	1.44E-04
19	GO:1900055: regulation of leaf senescence	2.46E-04
20	GO:0061158: 3'-UTR-mediated mRNA destabilization	2.46E-04
21	GO:0080119: ER body organization	3.57E-04
22	GO:2000114: regulation of establishment of cell polarity	3.57E-04
23	GO:0048194: Golgi vesicle budding	3.57E-04
24	GO:1901000: regulation of response to salt stress	3.57E-04
25	GO:0043481: anthocyanin accumulation in tissues in response to UV light	3.57E-04
26	GO:0072583: clathrin-dependent endocytosis	3.57E-04
27	GO:0006623: protein targeting to vacuole	3.73E-04
28	GO:0045324: late endosome to vacuole transport	4.78E-04
29	GO:0045723: positive regulation of fatty acid biosynthetic process	4.78E-04
30	GO:0006097: glyoxylate cycle	6.05E-04
31	GO:0007029: endoplasmic reticulum organization	6.05E-04
32	GO:0000380: alternative mRNA splicing, via spliceosome	6.05E-04
33	GO:0010225: response to UV-C	6.05E-04
34	GO:0032876: negative regulation of DNA endoreduplication	6.05E-04
35	GO:0034052: positive regulation of plant-type hypersensitive response	6.05E-04
36	GO:0046686: response to cadmium ion	6.79E-04
37	GO:0016049: cell growth	7.05E-04
38	GO:0048232: male gamete generation	7.40E-04
39	GO:0070814: hydrogen sulfide biosynthetic process	7.40E-04
40	GO:0048280: vesicle fusion with Golgi apparatus	8.82E-04
41	GO:0006099: tricarboxylic acid cycle	9.67E-04
42	GO:0006368: transcription elongation from RNA polymerase II promoter	1.03E-03
43	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.03E-03
44	GO:0006605: protein targeting	1.18E-03
45	GO:0006102: isocitrate metabolic process	1.18E-03
46	GO:0009819: drought recovery	1.18E-03
47	GO:0048766: root hair initiation	1.18E-03
48	GO:0000209: protein polyubiquitination	1.22E-03
49	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	1.35E-03
50	GO:0009827: plant-type cell wall modification	1.35E-03
51	GO:0006607: NLS-bearing protein import into nucleus	1.52E-03
52	GO:0048364: root development	1.70E-03
53	GO:0006096: glycolytic process	1.85E-03
54	GO:0000103: sulfate assimilation	1.88E-03
55	GO:0006896: Golgi to vacuole transport	1.88E-03
56	GO:0048367: shoot system development	1.91E-03
57	GO:0048765: root hair cell differentiation	2.07E-03
58	GO:0000266: mitochondrial fission	2.27E-03
59	GO:0008361: regulation of cell size	2.27E-03
60	GO:0015031: protein transport	2.33E-03
61	GO:0055046: microgametogenesis	2.47E-03
62	GO:0005986: sucrose biosynthetic process	2.47E-03
63	GO:0007030: Golgi organization	2.89E-03
64	GO:0034976: response to endoplasmic reticulum stress	3.11E-03
65	GO:0006468: protein phosphorylation	3.31E-03
66	GO:2000377: regulation of reactive oxygen species metabolic process	3.34E-03
67	GO:0031348: negative regulation of defense response	4.05E-03
68	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.25E-03
69	GO:0009306: protein secretion	4.55E-03
70	GO:0010584: pollen exine formation	4.55E-03
71	GO:0009561: megagametogenesis	4.55E-03
72	GO:0042147: retrograde transport, endosome to Golgi	4.81E-03
73	GO:0010087: phloem or xylem histogenesis	5.07E-03
74	GO:0042335: cuticle development	5.07E-03
75	GO:0008360: regulation of cell shape	5.34E-03
76	GO:0042752: regulation of circadian rhythm	5.61E-03
77	GO:0019252: starch biosynthetic process	5.89E-03
78	GO:0006891: intra-Golgi vesicle-mediated transport	6.17E-03
79	GO:0002229: defense response to oomycetes	6.17E-03
80	GO:0010583: response to cyclopentenone	6.46E-03
81	GO:0009630: gravitropism	6.46E-03
82	GO:0007264: small GTPase mediated signal transduction	6.46E-03
83	GO:0007049: cell cycle	6.54E-03
84	GO:0048366: leaf development	6.90E-03
85	GO:0006914: autophagy	7.05E-03
86	GO:0006904: vesicle docking involved in exocytosis	7.35E-03
87	GO:0051607: defense response to virus	7.65E-03
88	GO:0016579: protein deubiquitination	7.65E-03
89	GO:0006886: intracellular protein transport	8.97E-03
90	GO:0008219: cell death	9.59E-03
91	GO:0006397: mRNA processing	1.12E-02
92	GO:0009867: jasmonic acid mediated signaling pathway	1.13E-02
93	GO:0008283: cell proliferation	1.35E-02
94	GO:0009873: ethylene-activated signaling pathway	1.39E-02
95	GO:0009734: auxin-activated signaling pathway	1.52E-02
96	GO:0051603: proteolysis involved in cellular protein catabolic process	1.71E-02
97	GO:0010224: response to UV-B	1.71E-02
98	GO:0009626: plant-type hypersensitive response	1.97E-02
99	GO:0051726: regulation of cell cycle	2.24E-02
100	GO:0009742: brassinosteroid mediated signaling pathway	2.24E-02
101	GO:0000398: mRNA splicing, via spliceosome	2.38E-02
102	GO:0016310: phosphorylation	2.54E-02
103	GO:0010150: leaf senescence	3.17E-02
104	GO:0006470: protein dephosphorylation	3.49E-02
105	GO:0007166: cell surface receptor signaling pathway	3.49E-02
106	GO:0009651: response to salt stress	3.74E-02
107	GO:0006979: response to oxidative stress	3.89E-02
108	GO:0009733: response to auxin	4.33E-02
109	GO:0006970: response to osmotic stress	4.56E-02
110	GO:0009860: pollen tube growth	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
2	GO:0005548: phospholipid transporter activity	0.00E+00
3	GO:0004012: phospholipid-translocating ATPase activity	1.38E-05
4	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.51E-05
5	GO:0030955: potassium ion binding	4.94E-05
6	GO:0004743: pyruvate kinase activity	4.94E-05
7	GO:0019707: protein-cysteine S-acyltransferase activity	5.94E-05
8	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	5.94E-05
9	GO:0030623: U5 snRNA binding	5.94E-05
10	GO:0000287: magnesium ion binding	7.65E-05
11	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.56E-05
12	GO:0003994: aconitate hydratase activity	1.44E-04
13	GO:0004781: sulfate adenylyltransferase (ATP) activity	2.46E-04
14	GO:0016805: dipeptidase activity	2.46E-04
15	GO:0005093: Rab GDP-dissociation inhibitor activity	2.46E-04
16	GO:0005047: signal recognition particle binding	2.46E-04
17	GO:0004674: protein serine/threonine kinase activity	3.47E-04
18	GO:0005496: steroid binding	6.05E-04
19	GO:0017070: U6 snRNA binding	6.05E-04
20	GO:0005524: ATP binding	9.94E-04
21	GO:0008235: metalloexopeptidase activity	1.03E-03
22	GO:0061630: ubiquitin protein ligase activity	1.06E-03
23	GO:0005515: protein binding	1.07E-03
24	GO:0003843: 1,3-beta-D-glucan synthase activity	1.35E-03
25	GO:0031490: chromatin DNA binding	1.69E-03
26	GO:0004177: aminopeptidase activity	2.07E-03
27	GO:0004022: alcohol dehydrogenase (NAD) activity	2.47E-03
28	GO:0008139: nuclear localization sequence binding	2.47E-03
29	GO:0019888: protein phosphatase regulator activity	2.47E-03
30	GO:0004535: poly(A)-specific ribonuclease activity	2.68E-03
31	GO:0004725: protein tyrosine phosphatase activity	3.11E-03
32	GO:0008565: protein transporter activity	3.30E-03
33	GO:0043130: ubiquitin binding	3.34E-03
34	GO:0033612: receptor serine/threonine kinase binding	3.81E-03
35	GO:0019706: protein-cysteine S-palmitoyltransferase activity	3.81E-03
36	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.81E-03
37	GO:0003756: protein disulfide isomerase activity	4.55E-03
38	GO:0003727: single-stranded RNA binding	4.55E-03
39	GO:0016301: kinase activity	5.14E-03
40	GO:0003713: transcription coactivator activity	5.34E-03
41	GO:0030276: clathrin binding	5.34E-03
42	GO:0016853: isomerase activity	5.61E-03
43	GO:0004872: receptor activity	5.89E-03
44	GO:0004843: thiol-dependent ubiquitin-specific protease activity	6.17E-03
45	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	9.25E-03
46	GO:0005215: transporter activity	9.26E-03
47	GO:0005096: GTPase activator activity	9.93E-03
48	GO:0030145: manganese ion binding	1.06E-02
49	GO:0003924: GTPase activity	1.07E-02
50	GO:0000149: SNARE binding	1.20E-02
51	GO:0008270: zinc ion binding	1.24E-02
52	GO:0051539: 4 iron, 4 sulfur cluster binding	1.24E-02
53	GO:0004672: protein kinase activity	1.33E-02
54	GO:0005484: SNAP receptor activity	1.35E-02
55	GO:0005198: structural molecule activity	1.47E-02
56	GO:0016887: ATPase activity	1.67E-02
57	GO:0015171: amino acid transmembrane transporter activity	1.80E-02
58	GO:0031625: ubiquitin protein ligase binding	1.80E-02
59	GO:0016746: transferase activity, transferring acyl groups	2.19E-02
60	GO:0004252: serine-type endopeptidase activity	2.72E-02
61	GO:0015144: carbohydrate transmembrane transporter activity	2.86E-02
62	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.02E-02
63	GO:0005351: sugar:proton symporter activity	3.12E-02
64	GO:0005525: GTP binding	3.14E-02
65	GO:0008017: microtubule binding	3.28E-02
66	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.76E-02
67	GO:0042802: identical protein binding	3.76E-02
68	GO:0008168: methyltransferase activity	4.21E-02
69	GO:0046982: protein heterodimerization activity	4.27E-02
70	GO:0043531: ADP binding	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0070449: elongin complex	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0008305: integrin complex	0.00E+00
4	GO:0071561: nucleus-vacuole junction	0.00E+00
5	GO:0005829: cytosol	5.37E-06
6	GO:0045334: clathrin-coated endocytic vesicle	5.94E-05
7	GO:0045252: oxoglutarate dehydrogenase complex	5.94E-05
8	GO:0000138: Golgi trans cisterna	5.94E-05
9	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	5.94E-05
10	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	5.94E-05
11	GO:0005770: late endosome	3.24E-04
12	GO:0031461: cullin-RING ubiquitin ligase complex	3.57E-04
13	GO:0009504: cell plate	3.73E-04
14	GO:0000932: P-body	5.73E-04
15	GO:0030126: COPI vesicle coat	6.05E-04
16	GO:0005774: vacuolar membrane	6.80E-04
17	GO:0005643: nuclear pore	7.40E-04
18	GO:0030127: COPII vesicle coat	7.40E-04
19	GO:0030140: trans-Golgi network transport vesicle	7.40E-04
20	GO:0005819: spindle	1.01E-03
21	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.03E-03
22	GO:0000794: condensed nuclear chromosome	1.03E-03
23	GO:0031902: late endosome membrane	1.09E-03
24	GO:0005802: trans-Golgi network	1.14E-03
25	GO:0012507: ER to Golgi transport vesicle membrane	1.18E-03
26	GO:0005886: plasma membrane	1.22E-03
27	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.35E-03
28	GO:0000148: 1,3-beta-D-glucan synthase complex	1.35E-03
29	GO:0009524: phragmoplast	2.91E-03
30	GO:0005789: endoplasmic reticulum membrane	3.08E-03
31	GO:0005769: early endosome	3.11E-03
32	GO:0043234: protein complex	3.11E-03
33	GO:0016021: integral component of membrane	5.63E-03
34	GO:0005773: vacuole	5.77E-03
35	GO:0005794: Golgi apparatus	5.92E-03
36	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	6.43E-03
37	GO:0005768: endosome	7.13E-03
38	GO:0005788: endoplasmic reticulum lumen	8.28E-03
39	GO:0000151: ubiquitin ligase complex	9.59E-03
40	GO:0000325: plant-type vacuole	1.06E-02
41	GO:0000139: Golgi membrane	1.20E-02
42	GO:0031201: SNARE complex	1.28E-02
43	GO:0005635: nuclear envelope	1.76E-02
44	GO:0005681: spliceosomal complex	1.88E-02
45	GO:0010008: endosome membrane	1.93E-02
46	GO:0005654: nucleoplasm	2.47E-02
47	GO:0009506: plasmodesma	2.77E-02
48	GO:0005783: endoplasmic reticulum	3.03E-02
49	GO:0005874: microtubule	4.92E-02