Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G11410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000024: maltose biosynthetic process0.00E+00
2GO:0018316: peptide cross-linking via L-cystine0.00E+00
3GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
4GO:0051555: flavonol biosynthetic process2.22E-07
5GO:0009698: phenylpropanoid metabolic process2.93E-07
6GO:0009813: flavonoid biosynthetic process3.15E-07
7GO:0009765: photosynthesis, light harvesting1.81E-06
8GO:0006559: L-phenylalanine catabolic process4.77E-06
9GO:0019605: butyrate metabolic process3.90E-05
10GO:0071454: cellular response to anoxia3.90E-05
11GO:0006083: acetate metabolic process3.90E-05
12GO:0043903: regulation of symbiosis, encompassing mutualism through parasitism3.90E-05
13GO:0080167: response to karrikin4.24E-05
14GO:0009225: nucleotide-sugar metabolic process6.80E-05
15GO:0019388: galactose catabolic process9.72E-05
16GO:0080183: response to photooxidative stress9.72E-05
17GO:0080153: negative regulation of reductive pentose-phosphate cycle9.72E-05
18GO:0009411: response to UV1.32E-04
19GO:1901562: response to paraquat1.68E-04
20GO:0010253: UDP-rhamnose biosynthetic process1.68E-04
21GO:0046417: chorismate metabolic process1.68E-04
22GO:0071492: cellular response to UV-A1.68E-04
23GO:0040009: regulation of growth rate1.68E-04
24GO:0006651: diacylglycerol biosynthetic process1.68E-04
25GO:0006520: cellular amino acid metabolic process1.86E-04
26GO:0009650: UV protection2.48E-04
27GO:0010731: protein glutathionylation2.48E-04
28GO:0009590: detection of gravity2.48E-04
29GO:0006572: tyrosine catabolic process2.48E-04
30GO:0042823: pyridoxal phosphate biosynthetic process2.48E-04
31GO:0034613: cellular protein localization3.33E-04
32GO:0071486: cellular response to high light intensity3.33E-04
33GO:0048442: sepal development3.33E-04
34GO:0048573: photoperiodism, flowering3.97E-04
35GO:0006097: glyoxylate cycle4.25E-04
36GO:0016094: polyprenol biosynthetic process4.25E-04
37GO:0071493: cellular response to UV-B4.25E-04
38GO:0019408: dolichol biosynthetic process4.25E-04
39GO:0016120: carotene biosynthetic process4.25E-04
40GO:0006811: ion transport4.83E-04
41GO:0010119: regulation of stomatal movement5.06E-04
42GO:0006796: phosphate-containing compound metabolic process5.22E-04
43GO:0010304: PSII associated light-harvesting complex II catabolic process5.22E-04
44GO:0010315: auxin efflux5.22E-04
45GO:0010076: maintenance of floral meristem identity6.22E-04
46GO:0009610: response to symbiotic fungus7.28E-04
47GO:0098869: cellular oxidant detoxification7.28E-04
48GO:0000028: ribosomal small subunit assembly8.37E-04
49GO:0005978: glycogen biosynthetic process8.37E-04
50GO:0015996: chlorophyll catabolic process9.50E-04
51GO:0010224: response to UV-B9.67E-04
52GO:0034765: regulation of ion transmembrane transport1.07E-03
53GO:0048441: petal development1.31E-03
54GO:0009073: aromatic amino acid family biosynthetic process1.44E-03
55GO:0000272: polysaccharide catabolic process1.44E-03
56GO:0048229: gametophyte development1.44E-03
57GO:0005983: starch catabolic process1.58E-03
58GO:0006006: glucose metabolic process1.72E-03
59GO:0009718: anthocyanin-containing compound biosynthetic process1.72E-03
60GO:0034605: cellular response to heat1.86E-03
61GO:0048440: carpel development1.86E-03
62GO:0019253: reductive pentose-phosphate cycle1.86E-03
63GO:0019853: L-ascorbic acid biosynthetic process2.01E-03
64GO:0006487: protein N-linked glycosylation2.32E-03
65GO:0009768: photosynthesis, light harvesting in photosystem I2.48E-03
66GO:0006366: transcription from RNA polymerase II promoter2.64E-03
67GO:0019915: lipid storage2.64E-03
68GO:0042127: regulation of cell proliferation3.15E-03
69GO:0010584: pollen exine formation3.15E-03
70GO:0048443: stamen development3.15E-03
71GO:0070417: cellular response to cold3.32E-03
72GO:0016117: carotenoid biosynthetic process3.32E-03
73GO:0042335: cuticle development3.50E-03
74GO:0019252: starch biosynthetic process4.06E-03
75GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.26E-03
76GO:0010193: response to ozone4.26E-03
77GO:0030154: cell differentiation4.53E-03
78GO:0010252: auxin homeostasis4.85E-03
79GO:0009911: positive regulation of flower development5.47E-03
80GO:0006629: lipid metabolic process6.23E-03
81GO:0018298: protein-chromophore linkage6.58E-03
82GO:0010311: lateral root formation6.80E-03
83GO:0008152: metabolic process6.86E-03
84GO:0010218: response to far red light7.04E-03
85GO:0010043: response to zinc ion7.27E-03
86GO:0009637: response to blue light7.75E-03
87GO:0010114: response to red light9.25E-03
88GO:0009926: auxin polar transport9.25E-03
89GO:0009744: response to sucrose9.25E-03
90GO:0000165: MAPK cascade1.06E-02
91GO:0031347: regulation of defense response1.06E-02
92GO:0009611: response to wounding1.13E-02
93GO:0009809: lignin biosynthetic process1.14E-02
94GO:0006486: protein glycosylation1.14E-02
95GO:0009909: regulation of flower development1.23E-02
96GO:0042545: cell wall modification1.43E-02
97GO:0009058: biosynthetic process1.78E-02
98GO:0045490: pectin catabolic process2.16E-02
99GO:0009733: response to auxin2.52E-02
100GO:0045944: positive regulation of transcription from RNA polymerase II promoter2.79E-02
101GO:0009409: response to cold3.04E-02
102GO:0009860: pollen tube growth3.10E-02
103GO:0009723: response to ethylene3.27E-02
104GO:0015979: photosynthesis3.77E-02
105GO:0055114: oxidation-reduction process4.41E-02
106GO:0016042: lipid catabolic process4.43E-02
107GO:0009408: response to heat4.53E-02
108GO:0009753: response to jasmonic acid4.76E-02
RankGO TermAdjusted P value
1GO:0047213: anthocyanidin 3-O-glucosyltransferase activity0.00E+00
2GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
3GO:1990055: phenylacetaldehyde synthase activity0.00E+00
4GO:0080018: anthocyanin 5-O-glucosyltransferase activity0.00E+00
5GO:0016719: carotene 7,8-desaturase activity0.00E+00
6GO:0047918: GDP-mannose 3,5-epimerase activity0.00E+00
7GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
8GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
9GO:0008194: UDP-glycosyltransferase activity4.59E-07
10GO:0045430: chalcone isomerase activity1.81E-06
11GO:0102229: amylopectin maltohydrolase activity4.77E-06
12GO:0016161: beta-amylase activity6.94E-06
13GO:0047760: butyrate-CoA ligase activity3.90E-05
14GO:0005244: voltage-gated ion channel activity3.90E-05
15GO:0004837: tyrosine decarboxylase activity3.90E-05
16GO:0045486: naringenin 3-dioxygenase activity3.90E-05
17GO:0003987: acetate-CoA ligase activity3.90E-05
18GO:0080043: quercetin 3-O-glucosyltransferase activity8.73E-05
19GO:0080044: quercetin 7-O-glucosyltransferase activity8.73E-05
20GO:0004106: chorismate mutase activity9.72E-05
21GO:0004614: phosphoglucomutase activity9.72E-05
22GO:0016868: intramolecular transferase activity, phosphotransferases9.72E-05
23GO:0008460: dTDP-glucose 4,6-dehydratase activity9.72E-05
24GO:0010280: UDP-L-rhamnose synthase activity9.72E-05
25GO:0050377: UDP-glucose 4,6-dehydratase activity9.72E-05
26GO:0035251: UDP-glucosyltransferase activity1.08E-04
27GO:0045174: glutathione dehydrogenase (ascorbate) activity1.68E-04
28GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.68E-04
29GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.48E-04
30GO:0016168: chlorophyll binding3.57E-04
31GO:0002094: polyprenyltransferase activity4.25E-04
32GO:0045547: dehydrodolichyl diphosphate synthase activity4.25E-04
33GO:0016208: AMP binding5.22E-04
34GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity5.22E-04
35GO:0016688: L-ascorbate peroxidase activity5.22E-04
36GO:0008429: phosphatidylethanolamine binding5.22E-04
37GO:0008195: phosphatidate phosphatase activity6.22E-04
38GO:0102425: myricetin 3-O-glucosyltransferase activity7.28E-04
39GO:0102360: daphnetin 3-O-glucosyltransferase activity7.28E-04
40GO:0004427: inorganic diphosphatase activity7.28E-04
41GO:0016621: cinnamoyl-CoA reductase activity7.28E-04
42GO:0003824: catalytic activity8.16E-04
43GO:0047893: flavonol 3-O-glucosyltransferase activity8.37E-04
44GO:0008970: phosphatidylcholine 1-acylhydrolase activity9.50E-04
45GO:0016757: transferase activity, transferring glycosyl groups1.00E-03
46GO:0016207: 4-coumarate-CoA ligase activity1.07E-03
47GO:0009672: auxin:proton symporter activity1.19E-03
48GO:0047372: acylglycerol lipase activity1.44E-03
49GO:0010329: auxin efflux transmembrane transporter activity1.72E-03
50GO:0030170: pyridoxal phosphate binding1.80E-03
51GO:0031409: pigment binding2.16E-03
52GO:0031418: L-ascorbic acid binding2.32E-03
53GO:0001046: core promoter sequence-specific DNA binding2.32E-03
54GO:0004176: ATP-dependent peptidase activity2.64E-03
55GO:0000287: magnesium ion binding3.36E-03
56GO:0016853: isomerase activity3.87E-03
57GO:0008237: metallopeptidase activity5.05E-03
58GO:0016491: oxidoreductase activity5.77E-03
59GO:0008375: acetylglucosaminyltransferase activity5.91E-03
60GO:0004806: triglyceride lipase activity6.13E-03
61GO:0004222: metalloendopeptidase activity7.04E-03
62GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding7.27E-03
63GO:0004364: glutathione transferase activity8.99E-03
64GO:0051287: NAD binding1.06E-02
65GO:0045330: aspartyl esterase activity1.23E-02
66GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.31E-02
67GO:0016874: ligase activity1.40E-02
68GO:0030599: pectinesterase activity1.40E-02
69GO:0016758: transferase activity, transferring hexosyl groups1.68E-02
70GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding1.88E-02
71GO:0046910: pectinesterase inhibitor activity2.05E-02
72GO:0046982: protein heterodimerization activity2.90E-02
73GO:0046983: protein dimerization activity3.00E-02
74GO:0043531: ADP binding3.14E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.62E-07
2GO:0042406: extrinsic component of endoplasmic reticulum membrane1.68E-04
3GO:0009509: chromoplast1.68E-04
4GO:0009523: photosystem II2.16E-04
5GO:0043231: intracellular membrane-bounded organelle9.27E-04
6GO:0005763: mitochondrial small ribosomal subunit1.07E-03
7GO:0010287: plastoglobule1.54E-03
8GO:0030076: light-harvesting complex2.01E-03
9GO:0043234: protein complex2.16E-03
10GO:0009570: chloroplast stroma3.16E-03
11GO:0009522: photosystem I3.87E-03
12GO:0071944: cell periphery4.65E-03
13GO:0010319: stromule5.05E-03
14GO:0009536: plastid5.27E-03
15GO:0009941: chloroplast envelope7.33E-03
16GO:0005737: cytoplasm7.66E-03
17GO:0005829: cytosol8.49E-03
18GO:0009535: chloroplast thylakoid membrane1.13E-02
19GO:0005777: peroxisome1.27E-02
20GO:0005783: endoplasmic reticulum1.33E-02
21GO:0009705: plant-type vacuole membrane2.16E-02
22GO:0005743: mitochondrial inner membrane4.30E-02
Gene type



Gene DE type