GO Enrichment Analysis of Co-expressed Genes with
AT4G11330
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015833: peptide transport | 0.00E+00 |
| 2 | GO:0009877: nodulation | 0.00E+00 |
| 3 | GO:0043171: peptide catabolic process | 0.00E+00 |
| 4 | GO:0042906: xanthine transport | 0.00E+00 |
| 5 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 6 | GO:0045022: early endosome to late endosome transport | 0.00E+00 |
| 7 | GO:0030644: cellular chloride ion homeostasis | 0.00E+00 |
| 8 | GO:0051928: positive regulation of calcium ion transport | 0.00E+00 |
| 9 | GO:1990641: response to iron ion starvation | 2.57E-04 |
| 10 | GO:0046520: sphingoid biosynthetic process | 2.57E-04 |
| 11 | GO:0035494: SNARE complex disassembly | 2.57E-04 |
| 12 | GO:1900060: negative regulation of ceramide biosynthetic process | 2.57E-04 |
| 13 | GO:0010286: heat acclimation | 4.07E-04 |
| 14 | GO:0009970: cellular response to sulfate starvation | 4.99E-04 |
| 15 | GO:0048255: mRNA stabilization | 5.68E-04 |
| 16 | GO:0015857: uracil transport | 5.68E-04 |
| 17 | GO:1902884: positive regulation of response to oxidative stress | 5.68E-04 |
| 18 | GO:0006101: citrate metabolic process | 5.68E-04 |
| 19 | GO:0030003: cellular cation homeostasis | 5.68E-04 |
| 20 | GO:0042939: tripeptide transport | 5.68E-04 |
| 21 | GO:1902000: homogentisate catabolic process | 5.68E-04 |
| 22 | GO:0009308: amine metabolic process | 5.68E-04 |
| 23 | GO:0090156: cellular sphingolipid homeostasis | 5.68E-04 |
| 24 | GO:0015720: allantoin transport | 5.68E-04 |
| 25 | GO:0032509: endosome transport via multivesicular body sorting pathway | 5.68E-04 |
| 26 | GO:0006883: cellular sodium ion homeostasis | 5.68E-04 |
| 27 | GO:0009409: response to cold | 5.81E-04 |
| 28 | GO:0044550: secondary metabolite biosynthetic process | 6.90E-04 |
| 29 | GO:1902448: positive regulation of shade avoidance | 9.22E-04 |
| 30 | GO:0042344: indole glucosinolate catabolic process | 9.22E-04 |
| 31 | GO:0006954: inflammatory response | 9.22E-04 |
| 32 | GO:0071705: nitrogen compound transport | 9.22E-04 |
| 33 | GO:1901562: response to paraquat | 9.22E-04 |
| 34 | GO:0090630: activation of GTPase activity | 9.22E-04 |
| 35 | GO:0030029: actin filament-based process | 9.22E-04 |
| 36 | GO:0009072: aromatic amino acid family metabolic process | 9.22E-04 |
| 37 | GO:0034976: response to endoplasmic reticulum stress | 1.04E-03 |
| 38 | GO:0009640: photomorphogenesis | 1.22E-03 |
| 39 | GO:0015749: monosaccharide transport | 1.32E-03 |
| 40 | GO:0006809: nitric oxide biosynthetic process | 1.32E-03 |
| 41 | GO:0009963: positive regulation of flavonoid biosynthetic process | 1.32E-03 |
| 42 | GO:1901332: negative regulation of lateral root development | 1.32E-03 |
| 43 | GO:0006882: cellular zinc ion homeostasis | 1.32E-03 |
| 44 | GO:0000578: embryonic axis specification | 1.32E-03 |
| 45 | GO:0006572: tyrosine catabolic process | 1.32E-03 |
| 46 | GO:0006624: vacuolar protein processing | 1.32E-03 |
| 47 | GO:0010601: positive regulation of auxin biosynthetic process | 1.32E-03 |
| 48 | GO:0009269: response to desiccation | 1.39E-03 |
| 49 | GO:0010600: regulation of auxin biosynthetic process | 1.76E-03 |
| 50 | GO:1901002: positive regulation of response to salt stress | 1.76E-03 |
| 51 | GO:0042594: response to starvation | 1.76E-03 |
| 52 | GO:0006878: cellular copper ion homeostasis | 1.76E-03 |
| 53 | GO:0042938: dipeptide transport | 1.76E-03 |
| 54 | GO:0010222: stem vascular tissue pattern formation | 1.76E-03 |
| 55 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.86E-03 |
| 56 | GO:0043097: pyrimidine nucleoside salvage | 2.25E-03 |
| 57 | GO:0042732: D-xylose metabolic process | 2.77E-03 |
| 58 | GO:0006206: pyrimidine nucleobase metabolic process | 2.77E-03 |
| 59 | GO:0000741: karyogamy | 2.77E-03 |
| 60 | GO:0002238: response to molecule of fungal origin | 2.77E-03 |
| 61 | GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation | 2.77E-03 |
| 62 | GO:0006635: fatty acid beta-oxidation | 2.79E-03 |
| 63 | GO:0016192: vesicle-mediated transport | 3.03E-03 |
| 64 | GO:0009416: response to light stimulus | 3.22E-03 |
| 65 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 3.33E-03 |
| 66 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 3.33E-03 |
| 67 | GO:0031930: mitochondria-nucleus signaling pathway | 3.33E-03 |
| 68 | GO:0006694: steroid biosynthetic process | 3.33E-03 |
| 69 | GO:0006914: autophagy | 3.38E-03 |
| 70 | GO:0048437: floral organ development | 3.93E-03 |
| 71 | GO:0006333: chromatin assembly or disassembly | 3.93E-03 |
| 72 | GO:0010044: response to aluminum ion | 3.93E-03 |
| 73 | GO:0009610: response to symbiotic fungus | 3.93E-03 |
| 74 | GO:0009395: phospholipid catabolic process | 3.93E-03 |
| 75 | GO:0055114: oxidation-reduction process | 4.49E-03 |
| 76 | GO:0009061: anaerobic respiration | 4.56E-03 |
| 77 | GO:0010928: regulation of auxin mediated signaling pathway | 4.56E-03 |
| 78 | GO:0006491: N-glycan processing | 4.56E-03 |
| 79 | GO:0009415: response to water | 4.56E-03 |
| 80 | GO:0006102: isocitrate metabolic process | 4.56E-03 |
| 81 | GO:0048573: photoperiodism, flowering | 4.74E-03 |
| 82 | GO:0006972: hyperosmotic response | 5.22E-03 |
| 83 | GO:0009817: defense response to fungus, incompatible interaction | 5.25E-03 |
| 84 | GO:0006811: ion transport | 5.79E-03 |
| 85 | GO:0006098: pentose-phosphate shunt | 5.92E-03 |
| 86 | GO:0034765: regulation of ion transmembrane transport | 5.92E-03 |
| 87 | GO:0046916: cellular transition metal ion homeostasis | 5.92E-03 |
| 88 | GO:0016051: carbohydrate biosynthetic process | 6.65E-03 |
| 89 | GO:0006099: tricarboxylic acid cycle | 6.96E-03 |
| 90 | GO:0010162: seed dormancy process | 7.40E-03 |
| 91 | GO:0006995: cellular response to nitrogen starvation | 7.40E-03 |
| 92 | GO:0055062: phosphate ion homeostasis | 7.40E-03 |
| 93 | GO:0007064: mitotic sister chromatid cohesion | 7.40E-03 |
| 94 | GO:0006535: cysteine biosynthetic process from serine | 7.40E-03 |
| 95 | GO:0009641: shade avoidance | 7.40E-03 |
| 96 | GO:0006816: calcium ion transport | 8.19E-03 |
| 97 | GO:0009682: induced systemic resistance | 8.19E-03 |
| 98 | GO:0052544: defense response by callose deposition in cell wall | 8.19E-03 |
| 99 | GO:0030148: sphingolipid biosynthetic process | 8.19E-03 |
| 100 | GO:0042542: response to hydrogen peroxide | 8.25E-03 |
| 101 | GO:0016925: protein sumoylation | 9.00E-03 |
| 102 | GO:0050826: response to freezing | 9.85E-03 |
| 103 | GO:0007034: vacuolar transport | 1.07E-02 |
| 104 | GO:0006813: potassium ion transport | 1.16E-02 |
| 105 | GO:0090351: seedling development | 1.16E-02 |
| 106 | GO:0080167: response to karrikin | 1.28E-02 |
| 107 | GO:0045333: cellular respiration | 1.35E-02 |
| 108 | GO:0019344: cysteine biosynthetic process | 1.35E-02 |
| 109 | GO:0016575: histone deacetylation | 1.45E-02 |
| 110 | GO:0006874: cellular calcium ion homeostasis | 1.45E-02 |
| 111 | GO:0009695: jasmonic acid biosynthetic process | 1.45E-02 |
| 112 | GO:0048511: rhythmic process | 1.55E-02 |
| 113 | GO:0010431: seed maturation | 1.55E-02 |
| 114 | GO:0015031: protein transport | 1.67E-02 |
| 115 | GO:0006396: RNA processing | 1.70E-02 |
| 116 | GO:0009693: ethylene biosynthetic process | 1.76E-02 |
| 117 | GO:0071215: cellular response to abscisic acid stimulus | 1.76E-02 |
| 118 | GO:0040007: growth | 1.76E-02 |
| 119 | GO:0010227: floral organ abscission | 1.76E-02 |
| 120 | GO:0048443: stamen development | 1.86E-02 |
| 121 | GO:0042631: cellular response to water deprivation | 2.09E-02 |
| 122 | GO:0009408: response to heat | 2.10E-02 |
| 123 | GO:0009960: endosperm development | 2.20E-02 |
| 124 | GO:0010154: fruit development | 2.20E-02 |
| 125 | GO:0008360: regulation of cell shape | 2.20E-02 |
| 126 | GO:0010197: polar nucleus fusion | 2.20E-02 |
| 127 | GO:0046323: glucose import | 2.20E-02 |
| 128 | GO:0048544: recognition of pollen | 2.32E-02 |
| 129 | GO:0061025: membrane fusion | 2.32E-02 |
| 130 | GO:0006814: sodium ion transport | 2.32E-02 |
| 131 | GO:0006623: protein targeting to vacuole | 2.43E-02 |
| 132 | GO:0009556: microsporogenesis | 2.43E-02 |
| 133 | GO:0010150: leaf senescence | 2.87E-02 |
| 134 | GO:0019760: glucosinolate metabolic process | 2.93E-02 |
| 135 | GO:0010252: auxin homeostasis | 2.93E-02 |
| 136 | GO:0016126: sterol biosynthetic process | 3.32E-02 |
| 137 | GO:0009414: response to water deprivation | 3.33E-02 |
| 138 | GO:0010468: regulation of gene expression | 3.42E-02 |
| 139 | GO:0009617: response to bacterium | 3.42E-02 |
| 140 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 3.46E-02 |
| 141 | GO:0006979: response to oxidative stress | 3.49E-02 |
| 142 | GO:0016049: cell growth | 3.87E-02 |
| 143 | GO:0009737: response to abscisic acid | 3.96E-02 |
| 144 | GO:0048481: plant ovule development | 4.01E-02 |
| 145 | GO:0008219: cell death | 4.01E-02 |
| 146 | GO:0009813: flavonoid biosynthetic process | 4.16E-02 |
| 147 | GO:0006499: N-terminal protein myristoylation | 4.30E-02 |
| 148 | GO:0009631: cold acclimation | 4.45E-02 |
| 149 | GO:0010043: response to zinc ion | 4.45E-02 |
| 150 | GO:0035556: intracellular signal transduction | 4.57E-02 |
| 151 | GO:0006865: amino acid transport | 4.60E-02 |
| 152 | GO:0006970: response to osmotic stress | 4.75E-02 |
| 153 | GO:0045087: innate immune response | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047172: shikimate O-hydroxycinnamoyltransferase activity | 0.00E+00 |
| 2 | GO:0009045: xylose isomerase activity | 0.00E+00 |
| 3 | GO:0015197: peptide transporter activity | 0.00E+00 |
| 4 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 5 | GO:0015334: high-affinity oligopeptide transporter activity | 0.00E+00 |
| 6 | GO:0005358: high-affinity hydrogen:glucose symporter activity | 0.00E+00 |
| 7 | GO:0018580: nitronate monooxygenase activity | 0.00E+00 |
| 8 | GO:0005272: sodium channel activity | 0.00E+00 |
| 9 | GO:0047205: quinate O-hydroxycinnamoyltransferase activity | 0.00E+00 |
| 10 | GO:0042907: xanthine transmembrane transporter activity | 0.00E+00 |
| 11 | GO:0004525: ribonuclease III activity | 2.41E-04 |
| 12 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 2.57E-04 |
| 13 | GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity | 2.57E-04 |
| 14 | GO:0046870: cadmium ion binding | 2.57E-04 |
| 15 | GO:0004112: cyclic-nucleotide phosphodiesterase activity | 2.57E-04 |
| 16 | GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity | 2.57E-04 |
| 17 | GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity | 2.57E-04 |
| 18 | GO:0052595: aliphatic-amine oxidase activity | 2.57E-04 |
| 19 | GO:0070006: metalloaminopeptidase activity | 2.57E-04 |
| 20 | GO:0005244: voltage-gated ion channel activity | 2.57E-04 |
| 21 | GO:0009679: hexose:proton symporter activity | 2.57E-04 |
| 22 | GO:0000170: sphingosine hydroxylase activity | 2.57E-04 |
| 23 | GO:0010013: N-1-naphthylphthalamic acid binding | 2.57E-04 |
| 24 | GO:0017091: AU-rich element binding | 2.57E-04 |
| 25 | GO:0005267: potassium channel activity | 2.98E-04 |
| 26 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 5.68E-04 |
| 27 | GO:0042284: sphingolipid delta-4 desaturase activity | 5.68E-04 |
| 28 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 5.68E-04 |
| 29 | GO:0042937: tripeptide transporter activity | 5.68E-04 |
| 30 | GO:0032791: lead ion binding | 5.68E-04 |
| 31 | GO:0005274: allantoin uptake transmembrane transporter activity | 5.68E-04 |
| 32 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 5.68E-04 |
| 33 | GO:0003994: aconitate hydratase activity | 5.68E-04 |
| 34 | GO:0004177: aminopeptidase activity | 5.76E-04 |
| 35 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.68E-04 |
| 36 | GO:0017150: tRNA dihydrouridine synthase activity | 9.22E-04 |
| 37 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 9.22E-04 |
| 38 | GO:0004096: catalase activity | 9.22E-04 |
| 39 | GO:0005483: soluble NSF attachment protein activity | 9.22E-04 |
| 40 | GO:0019948: SUMO activating enzyme activity | 9.22E-04 |
| 41 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 9.34E-04 |
| 42 | GO:0005506: iron ion binding | 9.47E-04 |
| 43 | GO:0048027: mRNA 5'-UTR binding | 1.32E-03 |
| 44 | GO:0004108: citrate (Si)-synthase activity | 1.32E-03 |
| 45 | GO:0030527: structural constituent of chromatin | 1.32E-03 |
| 46 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 1.32E-03 |
| 47 | GO:0004300: enoyl-CoA hydratase activity | 1.32E-03 |
| 48 | GO:0009001: serine O-acetyltransferase activity | 1.32E-03 |
| 49 | GO:0015210: uracil transmembrane transporter activity | 1.76E-03 |
| 50 | GO:0042277: peptide binding | 1.76E-03 |
| 51 | GO:0009916: alternative oxidase activity | 1.76E-03 |
| 52 | GO:0042936: dipeptide transporter activity | 1.76E-03 |
| 53 | GO:0019905: syntaxin binding | 1.76E-03 |
| 54 | GO:0015145: monosaccharide transmembrane transporter activity | 2.25E-03 |
| 55 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 2.25E-03 |
| 56 | GO:0002020: protease binding | 2.25E-03 |
| 57 | GO:0020037: heme binding | 2.66E-03 |
| 58 | GO:0004629: phospholipase C activity | 2.77E-03 |
| 59 | GO:0019137: thioglucosidase activity | 2.77E-03 |
| 60 | GO:0004497: monooxygenase activity | 2.80E-03 |
| 61 | GO:0004197: cysteine-type endopeptidase activity | 2.98E-03 |
| 62 | GO:0005261: cation channel activity | 3.33E-03 |
| 63 | GO:0004849: uridine kinase activity | 3.33E-03 |
| 64 | GO:0004435: phosphatidylinositol phospholipase C activity | 3.33E-03 |
| 65 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 4.56E-03 |
| 66 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 5.22E-03 |
| 67 | GO:0005096: GTPase activator activity | 5.52E-03 |
| 68 | GO:0000989: transcription factor activity, transcription factor binding | 5.92E-03 |
| 69 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 5.92E-03 |
| 70 | GO:0019825: oxygen binding | 5.98E-03 |
| 71 | GO:0050897: cobalt ion binding | 6.07E-03 |
| 72 | GO:0015020: glucuronosyltransferase activity | 7.40E-03 |
| 73 | GO:0008081: phosphoric diester hydrolase activity | 9.85E-03 |
| 74 | GO:0005262: calcium channel activity | 9.85E-03 |
| 75 | GO:0004175: endopeptidase activity | 1.07E-02 |
| 76 | GO:0008131: primary amine oxidase activity | 1.07E-02 |
| 77 | GO:0016301: kinase activity | 1.14E-02 |
| 78 | GO:0003712: transcription cofactor activity | 1.16E-02 |
| 79 | GO:0005217: intracellular ligand-gated ion channel activity | 1.16E-02 |
| 80 | GO:0004970: ionotropic glutamate receptor activity | 1.16E-02 |
| 81 | GO:0031625: ubiquitin protein ligase binding | 1.29E-02 |
| 82 | GO:0004407: histone deacetylase activity | 1.35E-02 |
| 83 | GO:0004707: MAP kinase activity | 1.55E-02 |
| 84 | GO:0003756: protein disulfide isomerase activity | 1.86E-02 |
| 85 | GO:0008270: zinc ion binding | 1.90E-02 |
| 86 | GO:0030276: clathrin binding | 2.20E-02 |
| 87 | GO:0048038: quinone binding | 2.56E-02 |
| 88 | GO:0005351: sugar:proton symporter activity | 2.80E-02 |
| 89 | GO:0004674: protein serine/threonine kinase activity | 2.98E-02 |
| 90 | GO:0008237: metallopeptidase activity | 3.06E-02 |
| 91 | GO:0005200: structural constituent of cytoskeleton | 3.06E-02 |
| 92 | GO:0051213: dioxygenase activity | 3.32E-02 |
| 93 | GO:0008375: acetylglucosaminyltransferase activity | 3.59E-02 |
| 94 | GO:0102483: scopolin beta-glucosidase activity | 3.73E-02 |
| 95 | GO:0030247: polysaccharide binding | 3.73E-02 |
| 96 | GO:0003824: catalytic activity | 3.95E-02 |
| 97 | GO:0005215: transporter activity | 3.99E-02 |
| 98 | GO:0046982: protein heterodimerization activity | 4.34E-02 |
| 99 | GO:0003682: chromatin binding | 4.67E-02 |
| 100 | GO:0005515: protein binding | 4.72E-02 |
| 101 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 4.75E-02 |
| 102 | GO:0003993: acid phosphatase activity | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010009: cytoplasmic side of endosome membrane | 0.00E+00 |
| 2 | GO:0016021: integral component of membrane | 4.48E-07 |
| 3 | GO:0000323: lytic vacuole | 2.51E-05 |
| 4 | GO:0005773: vacuole | 2.69E-05 |
| 5 | GO:0035339: SPOTS complex | 2.57E-04 |
| 6 | GO:0005777: peroxisome | 2.71E-04 |
| 7 | GO:0005783: endoplasmic reticulum | 2.94E-04 |
| 8 | GO:0009898: cytoplasmic side of plasma membrane | 1.76E-03 |
| 9 | GO:0032586: protein storage vacuole membrane | 1.76E-03 |
| 10 | GO:0005776: autophagosome | 1.76E-03 |
| 11 | GO:0005886: plasma membrane | 1.93E-03 |
| 12 | GO:0010008: endosome membrane | 2.29E-03 |
| 13 | GO:0034045: pre-autophagosomal structure membrane | 5.22E-03 |
| 14 | GO:0000326: protein storage vacuole | 5.22E-03 |
| 15 | GO:0031901: early endosome membrane | 5.92E-03 |
| 16 | GO:0031090: organelle membrane | 5.92E-03 |
| 17 | GO:0010494: cytoplasmic stress granule | 5.92E-03 |
| 18 | GO:0000786: nucleosome | 6.36E-03 |
| 19 | GO:0005884: actin filament | 8.19E-03 |
| 20 | GO:0005764: lysosome | 1.07E-02 |
| 21 | GO:0009506: plasmodesma | 1.23E-02 |
| 22 | GO:0005769: early endosome | 1.25E-02 |
| 23 | GO:0005794: Golgi apparatus | 1.38E-02 |
| 24 | GO:0005774: vacuolar membrane | 1.44E-02 |
| 25 | GO:0070469: respiratory chain | 1.45E-02 |
| 26 | GO:0031410: cytoplasmic vesicle | 1.65E-02 |
| 27 | GO:0016020: membrane | 1.71E-02 |
| 28 | GO:0030136: clathrin-coated vesicle | 1.97E-02 |
| 29 | GO:0005770: late endosome | 2.20E-02 |
| 30 | GO:0031965: nuclear membrane | 2.43E-02 |
| 31 | GO:0005802: trans-Golgi network | 2.45E-02 |
| 32 | GO:0000785: chromatin | 2.68E-02 |
| 33 | GO:0005768: endosome | 2.96E-02 |
| 34 | GO:0000932: P-body | 3.32E-02 |
| 35 | GO:0000151: ubiquitin ligase complex | 4.01E-02 |
| 36 | GO:0000325: plant-type vacuole | 4.45E-02 |
| 37 | GO:0005737: cytoplasm | 4.89E-02 |