co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G11220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009448: gamma-aminobutyric acid metabolic process	0.00E+00
2	GO:0006592: ornithine biosynthetic process	0.00E+00
3	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
4	GO:0006105: succinate metabolic process	0.00E+00
5	GO:0019484: beta-alanine catabolic process	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:1900425: negative regulation of defense response to bacterium	3.36E-05
8	GO:0016559: peroxisome fission	8.26E-05
9	GO:0006540: glutamate decarboxylation to succinate	1.27E-04
10	GO:0098721: uracil import across plasma membrane	1.27E-04
11	GO:0098702: adenine import across plasma membrane	1.27E-04
12	GO:0035266: meristem growth	1.27E-04
13	GO:0098710: guanine import across plasma membrane	1.27E-04
14	GO:0009450: gamma-aminobutyric acid catabolic process	1.27E-04
15	GO:0007292: female gamete generation	1.27E-04
16	GO:0010184: cytokinin transport	1.27E-04
17	GO:0035344: hypoxanthine transport	1.27E-04
18	GO:0046520: sphingoid biosynthetic process	1.27E-04
19	GO:0009865: pollen tube adhesion	1.27E-04
20	GO:0000266: mitochondrial fission	2.48E-04
21	GO:0007154: cell communication	2.94E-04
22	GO:0010033: response to organic substance	2.94E-04
23	GO:0006672: ceramide metabolic process	2.94E-04
24	GO:0051788: response to misfolded protein	2.94E-04
25	GO:0052542: defense response by callose deposition	2.94E-04
26	GO:0043066: negative regulation of apoptotic process	2.94E-04
27	GO:0015865: purine nucleotide transport	2.94E-04
28	GO:0060968: regulation of gene silencing	4.86E-04
29	GO:0009062: fatty acid catabolic process	4.86E-04
30	GO:0010359: regulation of anion channel activity	4.86E-04
31	GO:0061158: 3'-UTR-mediated mRNA destabilization	4.86E-04
32	GO:0006020: inositol metabolic process	6.95E-04
33	GO:2001289: lipid X metabolic process	6.95E-04
34	GO:0046902: regulation of mitochondrial membrane permeability	6.95E-04
35	GO:0072583: clathrin-dependent endocytosis	6.95E-04
36	GO:0045454: cell redox homeostasis	8.16E-04
37	GO:0006536: glutamate metabolic process	9.21E-04
38	GO:0006635: fatty acid beta-oxidation	1.06E-03
39	GO:0046686: response to cadmium ion	1.10E-03
40	GO:0030308: negative regulation of cell growth	1.16E-03
41	GO:0000290: deadenylation-dependent decapping of nuclear-transcribed mRNA	1.16E-03
42	GO:0009845: seed germination	1.17E-03
43	GO:0048364: root development	1.19E-03
44	GO:0006508: proteolysis	1.25E-03
45	GO:0006904: vesicle docking involved in exocytosis	1.35E-03
46	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.43E-03
47	GO:0048827: phyllome development	1.43E-03
48	GO:0016070: RNA metabolic process	1.43E-03
49	GO:0048232: male gamete generation	1.43E-03
50	GO:0043248: proteasome assembly	1.43E-03
51	GO:0010358: leaf shaping	1.43E-03
52	GO:0009267: cellular response to starvation	1.43E-03
53	GO:0035435: phosphate ion transmembrane transport	1.43E-03
54	GO:1902456: regulation of stomatal opening	1.43E-03
55	GO:0010337: regulation of salicylic acid metabolic process	1.43E-03
56	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	1.71E-03
57	GO:0048280: vesicle fusion with Golgi apparatus	1.71E-03
58	GO:0050790: regulation of catalytic activity	2.01E-03
59	GO:0010161: red light signaling pathway	2.01E-03
60	GO:0006955: immune response	2.01E-03
61	GO:0046470: phosphatidylcholine metabolic process	2.01E-03
62	GO:0010119: regulation of stomatal movement	2.27E-03
63	GO:0010078: maintenance of root meristem identity	2.32E-03
64	GO:0009819: drought recovery	2.32E-03
65	GO:1900150: regulation of defense response to fungus	2.32E-03
66	GO:0006526: arginine biosynthetic process	2.65E-03
67	GO:0006972: hyperosmotic response	2.65E-03
68	GO:0006887: exocytosis	2.94E-03
69	GO:0009821: alkaloid biosynthetic process	3.00E-03
70	GO:0090333: regulation of stomatal closure	3.00E-03
71	GO:0008202: steroid metabolic process	3.36E-03
72	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.36E-03
73	GO:0043069: negative regulation of programmed cell death	3.73E-03
74	GO:0048829: root cap development	3.73E-03
75	GO:0006896: Golgi to vacuole transport	3.73E-03
76	GO:0016192: vesicle-mediated transport	3.85E-03
77	GO:0046777: protein autophosphorylation	3.93E-03
78	GO:0010015: root morphogenesis	4.12E-03
79	GO:0000038: very long-chain fatty acid metabolic process	4.12E-03
80	GO:0043085: positive regulation of catalytic activity	4.12E-03
81	GO:0018107: peptidyl-threonine phosphorylation	4.93E-03
82	GO:0009651: response to salt stress	4.99E-03
83	GO:0048367: shoot system development	5.22E-03
84	GO:0006541: glutamine metabolic process	5.36E-03
85	GO:0009933: meristem structural organization	5.36E-03
86	GO:0009626: plant-type hypersensitive response	5.39E-03
87	GO:0090351: seedling development	5.80E-03
88	GO:0010053: root epidermal cell differentiation	5.80E-03
89	GO:0007031: peroxisome organization	5.80E-03
90	GO:0010167: response to nitrate	5.80E-03
91	GO:0005985: sucrose metabolic process	5.80E-03
92	GO:0006863: purine nucleobase transport	6.25E-03
93	GO:0018105: peptidyl-serine phosphorylation	6.27E-03
94	GO:0007010: cytoskeleton organization	6.71E-03
95	GO:0009414: response to water deprivation	7.47E-03
96	GO:0007005: mitochondrion organization	8.18E-03
97	GO:0035428: hexose transmembrane transport	8.18E-03
98	GO:0030433: ubiquitin-dependent ERAD pathway	8.18E-03
99	GO:0006012: galactose metabolic process	8.69E-03
100	GO:0006468: protein phosphorylation	9.27E-03
101	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.75E-03
102	GO:0042147: retrograde transport, endosome to Golgi	9.75E-03
103	GO:0006662: glycerol ether metabolic process	1.09E-02
104	GO:0046323: glucose import	1.09E-02
105	GO:0010154: fruit development	1.09E-02
106	GO:0048544: recognition of pollen	1.14E-02
107	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.18E-02
108	GO:0009738: abscisic acid-activated signaling pathway	1.18E-02
109	GO:0006623: protein targeting to vacuole	1.20E-02
110	GO:0010183: pollen tube guidance	1.20E-02
111	GO:0009749: response to glucose	1.20E-02
112	GO:0006891: intra-Golgi vesicle-mediated transport	1.26E-02
113	GO:0002229: defense response to oomycetes	1.26E-02
114	GO:0000302: response to reactive oxygen species	1.26E-02
115	GO:0035556: intracellular signal transduction	1.31E-02
116	GO:0009630: gravitropism	1.32E-02
117	GO:0030163: protein catabolic process	1.38E-02
118	GO:0071805: potassium ion transmembrane transport	1.50E-02
119	GO:0051607: defense response to virus	1.57E-02
120	GO:0009615: response to virus	1.63E-02
121	GO:0010029: regulation of seed germination	1.70E-02
122	GO:0006950: response to stress	1.83E-02
123	GO:0006888: ER to Golgi vesicle-mediated transport	1.83E-02
124	GO:0008219: cell death	1.97E-02
125	GO:0048767: root hair elongation	2.04E-02
126	GO:0010311: lateral root formation	2.04E-02
127	GO:0010200: response to chitin	2.10E-02
128	GO:0006499: N-terminal protein myristoylation	2.11E-02
129	GO:0007568: aging	2.19E-02
130	GO:0009631: cold acclimation	2.19E-02
131	GO:0016051: carbohydrate biosynthetic process	2.33E-02
132	GO:0007165: signal transduction	2.33E-02
133	GO:0045087: innate immune response	2.33E-02
134	GO:0034599: cellular response to oxidative stress	2.41E-02
135	GO:0006886: intracellular protein transport	2.51E-02
136	GO:0006839: mitochondrial transport	2.56E-02
137	GO:0006631: fatty acid metabolic process	2.64E-02
138	GO:0009640: photomorphogenesis	2.80E-02
139	GO:0016042: lipid catabolic process	2.91E-02
140	GO:0042742: defense response to bacterium	2.98E-02
141	GO:0006629: lipid metabolic process	2.99E-02
142	GO:0009965: leaf morphogenesis	3.04E-02
143	GO:0042538: hyperosmotic salinity response	3.29E-02
144	GO:0009809: lignin biosynthetic process	3.46E-02
145	GO:0006813: potassium ion transport	3.46E-02
146	GO:0051603: proteolysis involved in cellular protein catabolic process	3.54E-02
147	GO:0006096: glycolytic process	3.89E-02
148	GO:0009620: response to fungus	4.16E-02
149	GO:0006396: RNA processing	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0034387: 4-aminobutyrate:pyruvate transaminase activity	0.00E+00
2	GO:0008777: acetylornithine deacetylase activity	0.00E+00
3	GO:0015211: purine nucleoside transmembrane transporter activity	0.00E+00
4	GO:0019211: phosphatase activator activity	0.00E+00
5	GO:0005496: steroid binding	2.24E-05
6	GO:0032050: clathrin heavy chain binding	1.27E-04
7	GO:0000170: sphingosine hydroxylase activity	1.27E-04
8	GO:0008809: carnitine racemase activity	1.27E-04
9	GO:0015208: guanine transmembrane transporter activity	1.27E-04
10	GO:0015294: solute:cation symporter activity	1.27E-04
11	GO:0003867: 4-aminobutyrate transaminase activity	1.27E-04
12	GO:0015207: adenine transmembrane transporter activity	1.27E-04
13	GO:0047216: inositol 3-alpha-galactosyltransferase activity	2.94E-04
14	GO:0042284: sphingolipid delta-4 desaturase activity	2.94E-04
15	GO:0016805: dipeptidase activity	4.86E-04
16	GO:0008430: selenium binding	4.86E-04
17	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	6.95E-04
18	GO:0000339: RNA cap binding	6.95E-04
19	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.95E-04
20	GO:0004300: enoyl-CoA hydratase activity	6.95E-04
21	GO:0015035: protein disulfide oxidoreductase activity	8.35E-04
22	GO:0015210: uracil transmembrane transporter activity	9.21E-04
23	GO:0004674: protein serine/threonine kinase activity	1.13E-03
24	GO:0005471: ATP:ADP antiporter activity	1.16E-03
25	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.16E-03
26	GO:0036402: proteasome-activating ATPase activity	1.43E-03
27	GO:0004620: phospholipase activity	2.01E-03
28	GO:0008235: metalloexopeptidase activity	2.01E-03
29	GO:0052747: sinapyl alcohol dehydrogenase activity	2.32E-03
30	GO:0008142: oxysterol binding	2.65E-03
31	GO:0004630: phospholipase D activity	2.65E-03
32	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.65E-03
33	GO:0005515: protein binding	2.76E-03
34	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	3.00E-03
35	GO:0030955: potassium ion binding	3.36E-03
36	GO:0016844: strictosidine synthase activity	3.36E-03
37	GO:0004743: pyruvate kinase activity	3.36E-03
38	GO:0045309: protein phosphorylated amino acid binding	3.36E-03
39	GO:0005524: ATP binding	3.87E-03
40	GO:0004177: aminopeptidase activity	4.12E-03
41	GO:0008794: arsenate reductase (glutaredoxin) activity	4.12E-03
42	GO:0019904: protein domain specific binding	4.12E-03
43	GO:0030246: carbohydrate binding	4.17E-03
44	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.52E-03
45	GO:0008234: cysteine-type peptidase activity	4.74E-03
46	GO:0005315: inorganic phosphate transmembrane transporter activity	4.93E-03
47	GO:0004175: endopeptidase activity	5.36E-03
48	GO:0004190: aspartic-type endopeptidase activity	5.80E-03
49	GO:0017025: TBP-class protein binding	5.80E-03
50	GO:0005345: purine nucleobase transmembrane transporter activity	7.19E-03
51	GO:0015079: potassium ion transmembrane transporter activity	7.19E-03
52	GO:0016779: nucleotidyltransferase activity	8.18E-03
53	GO:0016301: kinase activity	8.25E-03
54	GO:0003727: single-stranded RNA binding	9.21E-03
55	GO:0047134: protein-disulfide reductase activity	9.75E-03
56	GO:0016887: ATPase activity	1.03E-02
57	GO:0004791: thioredoxin-disulfide reductase activity	1.14E-02
58	GO:0005355: glucose transmembrane transporter activity	1.14E-02
59	GO:0004872: receptor activity	1.20E-02
60	GO:0048038: quinone binding	1.26E-02
61	GO:0008137: NADH dehydrogenase (ubiquinone) activity	1.26E-02
62	GO:0004197: cysteine-type endopeptidase activity	1.32E-02
63	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.38E-02
64	GO:0005200: structural constituent of cytoskeleton	1.50E-02
65	GO:0008237: metallopeptidase activity	1.50E-02
66	GO:0016597: amino acid binding	1.57E-02
67	GO:0051213: dioxygenase activity	1.63E-02
68	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.77E-02
69	GO:0004683: calmodulin-dependent protein kinase activity	1.83E-02
70	GO:0005096: GTPase activator activity	2.04E-02
71	GO:0005516: calmodulin binding	2.06E-02
72	GO:0004222: metalloendopeptidase activity	2.11E-02
73	GO:0030145: manganese ion binding	2.19E-02
74	GO:0050897: cobalt ion binding	2.19E-02
75	GO:0000149: SNARE binding	2.48E-02
76	GO:0051539: 4 iron, 4 sulfur cluster binding	2.56E-02
77	GO:0005484: SNAP receptor activity	2.80E-02
78	GO:0051537: 2 iron, 2 sulfur cluster binding	2.96E-02
79	GO:0005198: structural molecule activity	3.04E-02
80	GO:0043565: sequence-specific DNA binding	3.20E-02
81	GO:0009055: electron carrier activity	3.21E-02
82	GO:0003824: catalytic activity	3.34E-02
83	GO:0016298: lipase activity	3.54E-02
84	GO:0022857: transmembrane transporter activity	4.26E-02
85	GO:0004672: protein kinase activity	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0005783: endoplasmic reticulum	7.39E-05
2	GO:0005773: vacuole	4.27E-04
3	GO:0005737: cytoplasm	4.42E-04
4	GO:0005829: cytosol	4.64E-04
5	GO:0016021: integral component of membrane	6.81E-04
6	GO:0070062: extracellular exosome	6.95E-04
7	GO:0000323: lytic vacuole	6.95E-04
8	GO:0005777: peroxisome	7.11E-04
9	GO:0000145: exocyst	1.13E-03
10	GO:0000164: protein phosphatase type 1 complex	1.16E-03
11	GO:0005778: peroxisomal membrane	1.35E-03
12	GO:0030140: trans-Golgi network transport vesicle	1.43E-03
13	GO:0005886: plasma membrane	1.50E-03
14	GO:0031597: cytosolic proteasome complex	1.71E-03
15	GO:0031595: nuclear proteasome complex	2.01E-03
16	GO:0012507: ER to Golgi transport vesicle membrane	2.32E-03
17	GO:0005779: integral component of peroxisomal membrane	2.65E-03
18	GO:0008540: proteasome regulatory particle, base subcomplex	3.36E-03
19	GO:0030125: clathrin vesicle coat	3.73E-03
20	GO:0005635: nuclear envelope	4.59E-03
21	GO:0005764: lysosome	5.36E-03
22	GO:0005741: mitochondrial outer membrane	7.68E-03
23	GO:0030136: clathrin-coated vesicle	9.75E-03
24	GO:0005770: late endosome	1.09E-02
25	GO:0005789: endoplasmic reticulum membrane	1.47E-02
26	GO:0000932: P-body	1.63E-02
27	GO:0030529: intracellular ribonucleoprotein complex	1.63E-02
28	GO:0005774: vacuolar membrane	1.66E-02
29	GO:0000325: plant-type vacuole	2.19E-02
30	GO:0031201: SNARE complex	2.64E-02
31	GO:0031902: late endosome membrane	2.64E-02
32	GO:0005856: cytoskeleton	3.04E-02
33	GO:0031966: mitochondrial membrane	3.29E-02
34	GO:0000502: proteasome complex	3.46E-02
35	GO:0010008: endosome membrane	3.98E-02
36	GO:0005747: mitochondrial respiratory chain complex I	3.98E-02
37	GO:0005834: heterotrimeric G-protein complex	4.07E-02
38	GO:0005732: small nucleolar ribonucleoprotein complex	4.72E-02