Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G11160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1904281: positive regulation of transcription from RNA polymerase V promoter0.00E+00
2GO:1990280: RNA localization to chromatin0.00E+00
3GO:0006127: glycerophosphate shuttle0.00E+00
4GO:0080178: 5-carbamoylmethyl uridine residue modification1.77E-05
5GO:1902466: positive regulation of histone H3-K27 trimethylation1.77E-05
6GO:1903705: positive regulation of production of siRNA involved in RNA interference1.77E-05
7GO:0043687: post-translational protein modification1.77E-05
8GO:0031538: negative regulation of anthocyanin metabolic process4.61E-05
9GO:0031204: posttranslational protein targeting to membrane, translocation4.61E-05
10GO:0043631: RNA polyadenylation4.61E-05
11GO:0051028: mRNA transport5.23E-05
12GO:0019563: glycerol catabolic process8.18E-05
13GO:0032784: regulation of DNA-templated transcription, elongation8.18E-05
14GO:0051601: exocyst localization1.23E-04
15GO:0048530: fruit morphogenesis1.23E-04
16GO:0019048: modulation by virus of host morphology or physiology1.23E-04
17GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.69E-04
18GO:0006346: methylation-dependent chromatin silencing1.69E-04
19GO:0002098: tRNA wobble uridine modification1.69E-04
20GO:0018279: protein N-linked glycosylation via asparagine2.19E-04
21GO:0006751: glutathione catabolic process2.72E-04
22GO:0033962: cytoplasmic mRNA processing body assembly3.27E-04
23GO:0006400: tRNA modification3.84E-04
24GO:0010928: regulation of auxin mediated signaling pathway4.43E-04
25GO:0035265: organ growth4.43E-04
26GO:0009787: regulation of abscisic acid-activated signaling pathway4.43E-04
27GO:0044030: regulation of DNA methylation5.05E-04
28GO:0060321: acceptance of pollen5.05E-04
29GO:2000024: regulation of leaf development5.68E-04
30GO:0006378: mRNA polyadenylation7.68E-04
31GO:0006913: nucleocytoplasmic transport7.68E-04
32GO:0080188: RNA-directed DNA methylation1.06E-03
33GO:0006071: glycerol metabolic process1.13E-03
34GO:0071215: cellular response to abscisic acid stimulus1.54E-03
35GO:0010089: xylem development1.63E-03
36GO:0008284: positive regulation of cell proliferation1.72E-03
37GO:0010501: RNA secondary structure unwinding1.81E-03
38GO:0010051: xylem and phloem pattern formation1.81E-03
39GO:0006886: intracellular protein transport1.97E-03
40GO:0006891: intra-Golgi vesicle-mediated transport2.19E-03
41GO:0016032: viral process2.29E-03
42GO:0006397: mRNA processing2.44E-03
43GO:0016579: protein deubiquitination2.70E-03
44GO:0016126: sterol biosynthetic process2.80E-03
45GO:0006887: exocytosis4.43E-03
46GO:0008283: cell proliferation4.68E-03
47GO:0009965: leaf morphogenesis5.07E-03
48GO:0009846: pollen germination5.48E-03
49GO:0006417: regulation of translation6.17E-03
50GO:0006413: translational initiation1.02E-02
51GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.16E-02
52GO:0006470: protein dephosphorylation1.18E-02
53GO:0009860: pollen tube growth1.54E-02
54GO:0016192: vesicle-mediated transport1.77E-02
55GO:0016310: phosphorylation2.05E-02
56GO:0009734: auxin-activated signaling pathway2.87E-02
57GO:0009738: abscisic acid-activated signaling pathway3.31E-02
58GO:0006457: protein folding4.07E-02
59GO:0006511: ubiquitin-dependent protein catabolic process4.21E-02
RankGO TermAdjusted P value
1GO:0004631: phosphomevalonate kinase activity0.00E+00
2GO:0052591: sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity0.00E+00
3GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
4GO:0004368: glycerol-3-phosphate dehydrogenase activity0.00E+00
5GO:0008026: ATP-dependent helicase activity2.35E-05
6GO:0003729: mRNA binding2.51E-05
7GO:0004652: polynucleotide adenylyltransferase activity1.23E-04
8GO:0004576: oligosaccharyl transferase activity1.69E-04
9GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity2.19E-04
10GO:0004714: transmembrane receptor protein tyrosine kinase activity4.43E-04
11GO:0008135: translation factor activity, RNA binding5.05E-04
12GO:0008565: protein transporter activity7.51E-04
13GO:0000175: 3'-5'-exoribonuclease activity9.08E-04
14GO:0008408: 3'-5' exonuclease activity1.37E-03
15GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.37E-03
16GO:0016779: nucleotidyltransferase activity1.46E-03
17GO:0003727: single-stranded RNA binding1.63E-03
18GO:0004843: thiol-dependent ubiquitin-specific protease activity2.19E-03
19GO:0004004: ATP-dependent RNA helicase activity3.13E-03
20GO:0005096: GTPase activator activity3.47E-03
21GO:0000166: nucleotide binding4.11E-03
22GO:0000149: SNARE binding4.19E-03
23GO:0043621: protein self-association4.94E-03
24GO:0005524: ATP binding4.96E-03
25GO:0016746: transferase activity, transferring acyl groups7.49E-03
26GO:0003743: translation initiation factor activity1.20E-02
27GO:0003723: RNA binding1.55E-02
28GO:0004722: protein serine/threonine phosphatase activity2.07E-02
29GO:0030246: carbohydrate binding4.18E-02
30GO:0005525: GTP binding4.83E-02
RankGO TermAdjusted P value
1GO:0009331: glycerol-3-phosphate dehydrogenase complex1.23E-04
2GO:0033588: Elongator holoenzyme complex1.23E-04
3GO:0008250: oligosaccharyltransferase complex2.19E-04
4GO:0005851: eukaryotic translation initiation factor 2B complex2.72E-04
5GO:0030131: clathrin adaptor complex4.43E-04
6GO:0010494: cytoplasmic stress granule5.68E-04
7GO:0009524: phragmoplast6.66E-04
8GO:0030659: cytoplasmic vesicle membrane9.82E-04
9GO:0030176: integral component of endoplasmic reticulum membrane1.06E-03
10GO:0005795: Golgi stack1.06E-03
11GO:0031965: nuclear membrane2.09E-03
12GO:0000145: exocyst2.29E-03
13GO:0000932: P-body2.80E-03
14GO:0005783: endoplasmic reticulum2.87E-03
15GO:0005819: spindle4.19E-03
16GO:0031902: late endosome membrane4.43E-03
17GO:0005856: cytoskeleton5.07E-03
18GO:0005635: nuclear envelope6.03E-03
19GO:0005622: intracellular7.28E-03
20GO:0005829: cytosol7.64E-03
21GO:0005737: cytoplasm8.04E-03
22GO:0005654: nucleoplasm8.42E-03
23GO:0005743: mitochondrial inner membrane2.14E-02
24GO:0009506: plasmodesma3.01E-02
25GO:0005777: peroxisome3.74E-02
Gene type



Gene DE type