Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G09900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
2GO:0006857: oligopeptide transport8.59E-05
3GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway9.99E-05
4GO:0055075: potassium ion homeostasis1.70E-04
5GO:0046856: phosphatidylinositol dephosphorylation3.06E-04
6GO:0015706: nitrate transport3.35E-04
7GO:0010207: photosystem II assembly3.96E-04
8GO:0010167: response to nitrate4.26E-04
9GO:2000377: regulation of reactive oxygen species metabolic process4.90E-04
10GO:0008299: isoprenoid biosynthetic process5.23E-04
11GO:0071472: cellular response to salt stress7.65E-04
12GO:0010305: leaf vascular tissue pattern formation7.65E-04
13GO:0010150: leaf senescence4.06E-03
14GO:0007166: cell surface receptor signaling pathway4.45E-03
15GO:0032259: methylation8.08E-03
16GO:0055085: transmembrane transport1.48E-02
17GO:0015031: protein transport2.44E-02
18GO:0006810: transport2.71E-02
19GO:0005975: carbohydrate metabolic process2.77E-02
20GO:0046686: response to cadmium ion2.83E-02
RankGO TermAdjusted P value
1GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
2GO:0030794: (S)-coclaurine-N-methyltransferase activity5.43E-06
3GO:0070402: NADPH binding2.75E-05
4GO:0035673: oligopeptide transmembrane transporter activity9.99E-05
5GO:0042578: phosphoric ester hydrolase activity9.99E-05
6GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity9.99E-05
7GO:0015112: nitrate transmembrane transporter activity2.49E-04
8GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity3.35E-04
9GO:0015198: oligopeptide transporter activity3.35E-04
10GO:0016853: isomerase activity8.01E-04
11GO:0030145: manganese ion binding1.44E-03
12GO:0015293: symporter activity1.96E-03
13GO:0005215: transporter activity2.22E-03
14GO:0022857: transmembrane transporter activity2.70E-03
15GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.87E-03
16GO:0016787: hydrolase activity4.26E-03
17GO:0003743: translation initiation factor activity4.52E-03
18GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.79E-03
19GO:0008168: methyltransferase activity5.34E-03
20GO:0016491: oxidoreductase activity2.51E-02
21GO:0004672: protein kinase activity2.71E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.84E-05
2GO:0009534: chloroplast thylakoid8.48E-05
3GO:0009570: chloroplast stroma2.64E-04
4GO:0009941: chloroplast envelope1.28E-03
5GO:0009543: chloroplast thylakoid lumen3.26E-03
6GO:0031969: chloroplast membrane6.35E-03
7GO:0005887: integral component of plasma membrane1.03E-02
8GO:0009579: thylakoid1.42E-02
9GO:0005886: plasma membrane2.53E-02
10GO:0009535: chloroplast thylakoid membrane3.66E-02
11GO:0005774: vacuolar membrane5.00E-02
Gene type



Gene DE type