Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G08950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006792: regulation of sulfur utilization0.00E+00
2GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
3GO:0006971: hypotonic response0.00E+00
4GO:0034484: raffinose catabolic process0.00E+00
5GO:0010200: response to chitin4.37E-08
6GO:0010411: xyloglucan metabolic process9.58E-06
7GO:0010438: cellular response to sulfur starvation2.66E-05
8GO:0009751: response to salicylic acid3.11E-05
9GO:2000022: regulation of jasmonic acid mediated signaling pathway3.38E-05
10GO:0030162: regulation of proteolysis9.72E-05
11GO:0010439: regulation of glucosinolate biosynthetic process9.72E-05
12GO:0009962: regulation of flavonoid biosynthetic process1.42E-04
13GO:2000029: regulation of proanthocyanidin biosynthetic process1.42E-04
14GO:0050691: regulation of defense response to virus by host1.42E-04
15GO:0033481: galacturonate biosynthetic process1.42E-04
16GO:0055063: sulfate ion homeostasis1.42E-04
17GO:0046500: S-adenosylmethionine metabolic process1.42E-04
18GO:2000693: positive regulation of seed maturation3.25E-04
19GO:0031542: positive regulation of anthocyanin biosynthetic process3.25E-04
20GO:0071497: cellular response to freezing3.25E-04
21GO:0080185: effector dependent induction by symbiont of host immune response3.25E-04
22GO:0009718: anthocyanin-containing compound biosynthetic process3.27E-04
23GO:0006355: regulation of transcription, DNA-templated3.68E-04
24GO:0042546: cell wall biogenesis4.47E-04
25GO:0019419: sulfate reduction5.33E-04
26GO:0010581: regulation of starch biosynthetic process5.33E-04
27GO:0080168: abscisic acid transport5.33E-04
28GO:0031347: regulation of defense response5.42E-04
29GO:0030154: cell differentiation7.27E-04
30GO:0040007: growth7.35E-04
31GO:1902358: sulfate transmembrane transport7.63E-04
32GO:0019722: calcium-mediated signaling7.98E-04
33GO:0000271: polysaccharide biosynthetic process9.27E-04
34GO:0009741: response to brassinosteroid9.96E-04
35GO:0046345: abscisic acid catabolic process1.01E-03
36GO:0045454: cell redox homeostasis1.01E-03
37GO:0006544: glycine metabolic process1.28E-03
38GO:0009828: plant-type cell wall loosening1.47E-03
39GO:0009753: response to jasmonic acid1.54E-03
40GO:0007267: cell-cell signaling1.56E-03
41GO:0009267: cellular response to starvation1.57E-03
42GO:0060918: auxin transport1.57E-03
43GO:1902456: regulation of stomatal opening1.57E-03
44GO:0006563: L-serine metabolic process1.57E-03
45GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.84E-03
46GO:0009873: ethylene-activated signaling pathway2.04E-03
47GO:0048573: photoperiodism, flowering2.05E-03
48GO:0006357: regulation of transcription from RNA polymerase II promoter2.12E-03
49GO:0050829: defense response to Gram-negative bacterium2.21E-03
50GO:0051510: regulation of unidimensional cell growth2.21E-03
51GO:0009414: response to water deprivation2.37E-03
52GO:0035265: organ growth2.56E-03
53GO:2000070: regulation of response to water deprivation2.56E-03
54GO:0009737: response to abscisic acid2.73E-03
55GO:0044030: regulation of DNA methylation2.93E-03
56GO:2000031: regulation of salicylic acid mediated signaling pathway2.93E-03
57GO:0010099: regulation of photomorphogenesis2.93E-03
58GO:0009826: unidimensional cell growth3.15E-03
59GO:0009738: abscisic acid-activated signaling pathway3.15E-03
60GO:0019432: triglyceride biosynthetic process3.31E-03
61GO:0051865: protein autoubiquitination3.31E-03
62GO:0006351: transcription, DNA-templated3.37E-03
63GO:0035999: tetrahydrofolate interconversion3.71E-03
64GO:0009638: phototropism3.71E-03
65GO:0009723: response to ethylene3.97E-03
66GO:0045893: positive regulation of transcription, DNA-templated4.09E-03
67GO:0051555: flavonol biosynthetic process4.12E-03
68GO:0000103: sulfate assimilation4.12E-03
69GO:0043069: negative regulation of programmed cell death4.12E-03
70GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.45E-03
71GO:1903507: negative regulation of nucleic acid-templated transcription4.55E-03
72GO:0000272: polysaccharide catabolic process4.55E-03
73GO:0010015: root morphogenesis4.55E-03
74GO:0000038: very long-chain fatty acid metabolic process4.55E-03
75GO:0046777: protein autophosphorylation4.72E-03
76GO:0009585: red, far-red light phototransduction4.95E-03
77GO:0016024: CDP-diacylglycerol biosynthetic process4.99E-03
78GO:0016925: protein sumoylation4.99E-03
79GO:0018107: peptidyl-threonine phosphorylation5.45E-03
80GO:0016567: protein ubiquitination5.49E-03
81GO:0034605: cellular response to heat5.92E-03
82GO:0010143: cutin biosynthetic process5.92E-03
83GO:0002237: response to molecule of bacterial origin5.92E-03
84GO:0010540: basipetal auxin transport5.92E-03
85GO:0005985: sucrose metabolic process6.41E-03
86GO:0009969: xyloglucan biosynthetic process6.41E-03
87GO:0009225: nucleotide-sugar metabolic process6.41E-03
88GO:0034976: response to endoplasmic reticulum stress6.91E-03
89GO:0006636: unsaturated fatty acid biosynthetic process6.91E-03
90GO:2000377: regulation of reactive oxygen species metabolic process7.42E-03
91GO:0006487: protein N-linked glycosylation7.42E-03
92GO:0019344: cysteine biosynthetic process7.42E-03
93GO:0009742: brassinosteroid mediated signaling pathway7.46E-03
94GO:0010026: trichome differentiation7.95E-03
95GO:0019953: sexual reproduction7.95E-03
96GO:0016998: cell wall macromolecule catabolic process8.49E-03
97GO:0010017: red or far-red light signaling pathway9.05E-03
98GO:0009831: plant-type cell wall modification involved in multidimensional cell growth9.62E-03
99GO:0010214: seed coat development1.02E-02
100GO:0010118: stomatal movement1.14E-02
101GO:0048653: anther development1.14E-02
102GO:0045489: pectin biosynthetic process1.20E-02
103GO:0009958: positive gravitropism1.20E-02
104GO:0010268: brassinosteroid homeostasis1.20E-02
105GO:0009791: post-embryonic development1.33E-02
106GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.36E-02
107GO:0009739: response to gibberellin1.36E-02
108GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.39E-02
109GO:0002229: defense response to oomycetes1.39E-02
110GO:0016132: brassinosteroid biosynthetic process1.39E-02
111GO:0010583: response to cyclopentenone1.46E-02
112GO:0035556: intracellular signal transduction1.58E-02
113GO:0019760: glucosinolate metabolic process1.60E-02
114GO:0009639: response to red or far red light1.60E-02
115GO:0016125: sterol metabolic process1.60E-02
116GO:0001666: response to hypoxia1.81E-02
117GO:0009816: defense response to bacterium, incompatible interaction1.88E-02
118GO:0009658: chloroplast organization1.89E-02
119GO:0009627: systemic acquired resistance1.96E-02
120GO:0006970: response to osmotic stress2.04E-02
121GO:0009860: pollen tube growth2.04E-02
122GO:0016311: dephosphorylation2.11E-02
123GO:0016049: cell growth2.11E-02
124GO:0009817: defense response to fungus, incompatible interaction2.19E-02
125GO:0048366: leaf development2.23E-02
126GO:0048767: root hair elongation2.26E-02
127GO:0009813: flavonoid biosynthetic process2.26E-02
128GO:0010218: response to far red light2.34E-02
129GO:0048527: lateral root development2.42E-02
130GO:0010119: regulation of stomatal movement2.42E-02
131GO:0009867: jasmonic acid mediated signaling pathway2.59E-02
132GO:0016051: carbohydrate biosynthetic process2.59E-02
133GO:0042542: response to hydrogen peroxide3.01E-02
134GO:0010114: response to red light3.10E-02
135GO:0006629: lipid metabolic process3.46E-02
136GO:0006855: drug transmembrane transport3.46E-02
137GO:0042742: defense response to bacterium3.57E-02
138GO:0071555: cell wall organization3.57E-02
139GO:0006979: response to oxidative stress3.60E-02
140GO:0009664: plant-type cell wall organization3.65E-02
141GO:0006486: protein glycosylation3.83E-02
142GO:0009733: response to auxin4.11E-02
143GO:0048316: seed development4.42E-02
RankGO TermAdjusted P value
1GO:0045552: dihydrokaempferol 4-reductase activity0.00E+00
2GO:0047890: flavanone 4-reductase activity0.00E+00
3GO:0043565: sequence-specific DNA binding3.95E-05
4GO:0016762: xyloglucan:xyloglucosyl transferase activity8.85E-05
5GO:0003700: transcription factor activity, sequence-specific DNA binding1.04E-04
6GO:0080132: fatty acid alpha-hydroxylase activity1.42E-04
7GO:0090440: abscisic acid transporter activity1.42E-04
8GO:1901149: salicylic acid binding1.42E-04
9GO:0016798: hydrolase activity, acting on glycosyl bonds1.92E-04
10GO:0050736: O-malonyltransferase activity3.25E-04
11GO:0009973: adenylyl-sulfate reductase activity3.25E-04
12GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity3.25E-04
13GO:0033741: adenylyl-sulfate reductase (glutathione) activity3.25E-04
14GO:0010295: (+)-abscisic acid 8'-hydroxylase activity5.33E-04
15GO:0052692: raffinose alpha-galactosidase activity5.33E-04
16GO:0044212: transcription regulatory region DNA binding6.13E-04
17GO:0033843: xyloglucan 6-xylosyltransferase activity7.63E-04
18GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity7.63E-04
19GO:0050378: UDP-glucuronate 4-epimerase activity1.01E-03
20GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.01E-03
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.19E-03
22GO:0004372: glycine hydroxymethyltransferase activity1.28E-03
23GO:0031386: protein tag1.28E-03
24GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.57E-03
25GO:0035252: UDP-xylosyltransferase activity1.57E-03
26GO:0010427: abscisic acid binding1.57E-03
27GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity1.57E-03
28GO:0080046: quercetin 4'-O-glucosyltransferase activity1.57E-03
29GO:0016161: beta-amylase activity1.88E-03
30GO:0008271: secondary active sulfate transmembrane transporter activity2.93E-03
31GO:0004864: protein phosphatase inhibitor activity4.12E-03
32GO:0004842: ubiquitin-protein transferase activity4.36E-03
33GO:0000976: transcription regulatory region sequence-specific DNA binding4.99E-03
34GO:0015116: sulfate transmembrane transporter activity4.99E-03
35GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds5.05E-03
36GO:0031625: ubiquitin protein ligase binding5.48E-03
37GO:0003712: transcription cofactor activity6.41E-03
38GO:0016757: transferase activity, transferring glycosyl groups6.83E-03
39GO:0003714: transcription corepressor activity7.42E-03
40GO:0035251: UDP-glucosyltransferase activity8.49E-03
41GO:0016758: transferase activity, transferring hexosyl groups8.58E-03
42GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity9.05E-03
43GO:0003756: protein disulfide isomerase activity1.02E-02
44GO:0003677: DNA binding1.08E-02
45GO:0004402: histone acetyltransferase activity1.14E-02
46GO:0001085: RNA polymerase II transcription factor binding1.20E-02
47GO:0050662: coenzyme binding1.26E-02
48GO:0004872: receptor activity1.33E-02
49GO:0004674: protein serine/threonine kinase activity1.40E-02
50GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.53E-02
51GO:0016791: phosphatase activity1.60E-02
52GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.67E-02
53GO:0004672: protein kinase activity1.72E-02
54GO:0016740: transferase activity1.90E-02
55GO:0008375: acetylglucosaminyltransferase activity1.96E-02
56GO:0009931: calcium-dependent protein serine/threonine kinase activity1.96E-02
57GO:0004806: triglyceride lipase activity2.03E-02
58GO:0015238: drug transmembrane transporter activity2.26E-02
59GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.42E-02
60GO:0004871: signal transducer activity2.94E-02
61GO:0015293: symporter activity3.37E-02
62GO:0016298: lipase activity3.93E-02
63GO:0003824: catalytic activity4.00E-02
64GO:0045735: nutrient reservoir activity4.32E-02
65GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.42E-02
66GO:0080043: quercetin 3-O-glucosyltransferase activity4.62E-02
67GO:0080044: quercetin 7-O-glucosyltransferase activity4.62E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0042406: extrinsic component of endoplasmic reticulum membrane5.33E-04
3GO:0019005: SCF ubiquitin ligase complex2.27E-03
4GO:0048046: apoplast2.50E-03
5GO:0005770: late endosome1.20E-02
6GO:0005615: extracellular space1.36E-02
7GO:0032580: Golgi cisterna membrane1.60E-02
8GO:0005667: transcription factor complex1.96E-02
9GO:0031902: late endosome membrane2.93E-02
10GO:0005794: Golgi apparatus3.19E-02
11GO:0009506: plasmodesma3.82E-02
12GO:0005634: nucleus4.53E-02
13GO:0005887: integral component of plasma membrane4.68E-02
14GO:0009505: plant-type cell wall4.70E-02
Gene type



Gene DE type