co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G08320

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0015031: protein transport	1.19E-05
3	GO:0006511: ubiquitin-dependent protein catabolic process	3.09E-05
4	GO:0010482: regulation of epidermal cell division	3.50E-05
5	GO:0003400: regulation of COPII vesicle coating	3.50E-05
6	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	3.50E-05
7	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	4.39E-05
8	GO:0046740: transport of virus in host, cell to cell	8.78E-05
9	GO:0015824: proline transport	8.78E-05
10	GO:1904961: quiescent center organization	8.78E-05
11	GO:0009306: protein secretion	1.24E-04
12	GO:0072661: protein targeting to plasma membrane	1.52E-04
13	GO:0006470: protein dephosphorylation	2.15E-04
14	GO:0070676: intralumenal vesicle formation	2.25E-04
15	GO:0010071: root meristem specification	2.25E-04
16	GO:0030163: protein catabolic process	2.30E-04
17	GO:0051567: histone H3-K9 methylation	3.05E-04
18	GO:0006656: phosphatidylcholine biosynthetic process	3.89E-04
19	GO:0006499: N-terminal protein myristoylation	4.23E-04
20	GO:0016192: vesicle-mediated transport	4.54E-04
21	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	4.78E-04
22	GO:0070814: hydrogen sulfide biosynthetic process	4.78E-04
23	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.78E-04
24	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	4.78E-04
25	GO:0009612: response to mechanical stimulus	5.70E-04
26	GO:0000911: cytokinesis by cell plate formation	5.70E-04
27	GO:0000209: protein polyubiquitination	6.43E-04
28	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.44E-04
29	GO:0009850: auxin metabolic process	7.68E-04
30	GO:0010078: maintenance of root meristem identity	7.68E-04
31	GO:0010492: maintenance of shoot apical meristem identity	7.68E-04
32	GO:0010449: root meristem growth	1.09E-03
33	GO:0000103: sulfate assimilation	1.20E-03
34	GO:0048765: root hair cell differentiation	1.32E-03
35	GO:0007034: vacuolar transport	1.70E-03
36	GO:0009266: response to temperature stimulus	1.70E-03
37	GO:0010026: trichome differentiation	2.26E-03
38	GO:0016226: iron-sulfur cluster assembly	2.56E-03
39	GO:0030433: ubiquitin-dependent ERAD pathway	2.56E-03
40	GO:0006730: one-carbon metabolic process	2.56E-03
41	GO:0080022: primary root development	3.20E-03
42	GO:0061025: membrane fusion	3.53E-03
43	GO:0046777: protein autophosphorylation	3.95E-03
44	GO:0006904: vesicle docking involved in exocytosis	4.60E-03
45	GO:0000910: cytokinesis	4.80E-03
46	GO:0016579: protein deubiquitination	4.80E-03
47	GO:0006906: vesicle fusion	5.38E-03
48	GO:0006888: ER to Golgi vesicle-mediated transport	5.58E-03
49	GO:0048767: root hair elongation	6.19E-03
50	GO:0006865: amino acid transport	6.83E-03
51	GO:0006887: exocytosis	7.95E-03
52	GO:0006897: endocytosis	7.95E-03
53	GO:0051707: response to other organism	8.41E-03
54	GO:0009737: response to abscisic acid	8.91E-03
55	GO:0031347: regulation of defense response	9.61E-03
56	GO:0009793: embryo development ending in seed dormancy	9.90E-03
57	GO:0000398: mRNA splicing, via spliceosome	1.47E-02
58	GO:0009058: biosynthetic process	1.62E-02
59	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.12E-02
60	GO:0008380: RNA splicing	2.22E-02
61	GO:0010468: regulation of gene expression	2.22E-02
62	GO:0007049: cell cycle	2.89E-02
63	GO:0045454: cell redox homeostasis	3.54E-02
64	GO:0006886: intracellular protein transport	3.62E-02
65	GO:0006397: mRNA processing	4.24E-02
66	GO:0048364: root development	4.24E-02
67	GO:0008152: metabolic process	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0005090: Sar guanyl-nucleotide exchange factor activity	3.50E-05
3	GO:0004105: choline-phosphate cytidylyltransferase activity	3.50E-05
4	GO:0031624: ubiquitin conjugating enzyme binding	5.08E-05
5	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	8.78E-05
6	GO:0015193: L-proline transmembrane transporter activity	1.52E-04
7	GO:0004781: sulfate adenylyltransferase (ATP) activity	1.52E-04
8	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.25E-04
9	GO:0004416: hydroxyacylglutathione hydrolase activity	2.25E-04
10	GO:0005096: GTPase activator activity	4.03E-04
11	GO:0036402: proteasome-activating ATPase activity	4.78E-04
12	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.70E-04
13	GO:0051020: GTPase binding	5.70E-04
14	GO:0051920: peroxiredoxin activity	5.70E-04
15	GO:0004722: protein serine/threonine phosphatase activity	6.00E-04
16	GO:0005484: SNAP receptor activity	6.19E-04
17	GO:0016209: antioxidant activity	7.68E-04
18	GO:0047617: acyl-CoA hydrolase activity	1.09E-03
19	GO:0005543: phospholipid binding	1.32E-03
20	GO:0017025: TBP-class protein binding	1.84E-03
21	GO:0046872: metal ion binding	1.96E-03
22	GO:0051087: chaperone binding	2.26E-03
23	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	2.41E-03
24	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.88E-03
25	GO:0061630: ubiquitin protein ligase activity	3.88E-03
26	GO:0008237: metallopeptidase activity	4.60E-03
27	GO:0003924: GTPase activity	5.43E-03
28	GO:0004674: protein serine/threonine kinase activity	6.36E-03
29	GO:0000149: SNARE binding	7.49E-03
30	GO:0004712: protein serine/threonine/tyrosine kinase activity	7.49E-03
31	GO:0016887: ATPase activity	8.41E-03
32	GO:0000166: nucleotide binding	9.64E-03
33	GO:0015171: amino acid transmembrane transporter activity	1.11E-02
34	GO:0016874: ligase activity	1.27E-02
35	GO:0005525: GTP binding	1.59E-02
36	GO:0008565: protein transporter activity	1.77E-02
37	GO:0042802: identical protein binding	2.32E-02
38	GO:0046982: protein heterodimerization activity	2.64E-02
39	GO:0004601: peroxidase activity	2.67E-02
40	GO:0016788: hydrolase activity, acting on ester bonds	2.71E-02
41	GO:0004842: ubiquitin-protein transferase activity	2.71E-02
42	GO:0004672: protein kinase activity	2.88E-02
43	GO:0005524: ATP binding	3.38E-02
44	GO:0042803: protein homodimerization activity	3.66E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0000502: proteasome complex	1.99E-08
3	GO:0031901: early endosome membrane	1.78E-05
4	GO:0008540: proteasome regulatory particle, base subcomplex	2.19E-05
5	GO:0008541: proteasome regulatory particle, lid subcomplex	3.20E-05
6	GO:0035061: interchromatin granule	8.78E-05
7	GO:0005838: proteasome regulatory particle	1.52E-04
8	GO:0030139: endocytic vesicle	1.52E-04
9	GO:0009504: cell plate	1.87E-04
10	GO:0032585: multivesicular body membrane	2.25E-04
11	GO:0005886: plasma membrane	2.93E-04
12	GO:0000151: ubiquitin ligase complex	3.84E-04
13	GO:0005771: multivesicular body	4.78E-04
14	GO:0031597: cytosolic proteasome complex	5.70E-04
15	GO:0000815: ESCRT III complex	5.70E-04
16	GO:0031595: nuclear proteasome complex	6.66E-04
17	GO:0030176: integral component of endoplasmic reticulum membrane	1.84E-03
18	GO:0005769: early endosome	1.97E-03
19	GO:0005770: late endosome	3.36E-03
20	GO:0019898: extrinsic component of membrane	3.70E-03
21	GO:0005788: endoplasmic reticulum lumen	5.18E-03
22	GO:0031902: late endosome membrane	7.95E-03
23	GO:0031201: SNARE complex	7.95E-03
24	GO:0005856: cytoskeleton	9.12E-03
25	GO:0005681: spliceosomal complex	1.17E-02
26	GO:0016607: nuclear speck	1.19E-02
27	GO:0010008: endosome membrane	1.19E-02
28	GO:0005834: heterotrimeric G-protein complex	1.22E-02
29	GO:0016020: membrane	1.33E-02
30	GO:0005623: cell	1.59E-02
31	GO:0009524: phragmoplast	1.62E-02
32	GO:0005774: vacuolar membrane	1.65E-02
33	GO:0005768: endosome	1.76E-02
34	GO:0005737: cytoplasm	2.20E-02
35	GO:0005783: endoplasmic reticulum	3.97E-02
36	GO:0005829: cytosol	4.19E-02
37	GO:0005794: Golgi apparatus	4.36E-02
38	GO:0005634: nucleus	4.85E-02