co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G05530

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043201: response to leucine	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
4	GO:0080053: response to phenylalanine	0.00E+00
5	GO:0002376: immune system process	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:0019375: galactolipid biosynthetic process	8.68E-05
9	GO:0060627: regulation of vesicle-mediated transport	1.31E-04
10	GO:0015760: glucose-6-phosphate transport	1.31E-04
11	GO:0080173: male-female gamete recognition during double fertilization	1.31E-04
12	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.31E-04
13	GO:0051457: maintenance of protein location in nucleus	3.03E-04
14	GO:0019521: D-gluconate metabolic process	3.03E-04
15	GO:0009915: phloem sucrose loading	3.03E-04
16	GO:0006212: uracil catabolic process	3.03E-04
17	GO:0019374: galactolipid metabolic process	3.03E-04
18	GO:0015712: hexose phosphate transport	3.03E-04
19	GO:0043066: negative regulation of apoptotic process	3.03E-04
20	GO:0019483: beta-alanine biosynthetic process	3.03E-04
21	GO:0042939: tripeptide transport	3.03E-04
22	GO:1902000: homogentisate catabolic process	3.03E-04
23	GO:0009805: coumarin biosynthetic process	3.03E-04
24	GO:0051262: protein tetramerization	3.03E-04
25	GO:0042742: defense response to bacterium	4.98E-04
26	GO:0009072: aromatic amino acid family metabolic process	4.99E-04
27	GO:0015714: phosphoenolpyruvate transport	4.99E-04
28	GO:0010359: regulation of anion channel activity	4.99E-04
29	GO:0035436: triose phosphate transmembrane transport	4.99E-04
30	GO:0010476: gibberellin mediated signaling pathway	4.99E-04
31	GO:0010325: raffinose family oligosaccharide biosynthetic process	4.99E-04
32	GO:0009410: response to xenobiotic stimulus	4.99E-04
33	GO:0010200: response to chitin	6.98E-04
34	GO:0001676: long-chain fatty acid metabolic process	7.14E-04
35	GO:0046355: mannan catabolic process	9.47E-04
36	GO:0015713: phosphoglycerate transport	9.47E-04
37	GO:0042938: dipeptide transport	9.47E-04
38	GO:0010109: regulation of photosynthesis	9.47E-04
39	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	9.47E-04
40	GO:0000302: response to reactive oxygen species	1.11E-03
41	GO:0009247: glycolipid biosynthetic process	1.20E-03
42	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.20E-03
43	GO:0006468: protein phosphorylation	1.28E-03
44	GO:1902456: regulation of stomatal opening	1.47E-03
45	GO:1900425: negative regulation of defense response to bacterium	1.47E-03
46	GO:0002238: response to molecule of fungal origin	1.47E-03
47	GO:0009643: photosynthetic acclimation	1.47E-03
48	GO:0050665: hydrogen peroxide biosynthetic process	1.47E-03
49	GO:0016036: cellular response to phosphate starvation	1.53E-03
50	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.76E-03
51	GO:0098655: cation transmembrane transport	1.76E-03
52	GO:0010189: vitamin E biosynthetic process	1.76E-03
53	GO:0009854: oxidative photosynthetic carbon pathway	1.76E-03
54	GO:0048444: floral organ morphogenesis	1.76E-03
55	GO:0043090: amino acid import	2.06E-03
56	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.06E-03
57	GO:0050790: regulation of catalytic activity	2.06E-03
58	GO:0009395: phospholipid catabolic process	2.06E-03
59	GO:1900150: regulation of defense response to fungus	2.39E-03
60	GO:0043068: positive regulation of programmed cell death	2.39E-03
61	GO:0006002: fructose 6-phosphate metabolic process	2.73E-03
62	GO:0022900: electron transport chain	2.73E-03
63	GO:0006526: arginine biosynthetic process	2.73E-03
64	GO:0010204: defense response signaling pathway, resistance gene-independent	2.73E-03
65	GO:0030968: endoplasmic reticulum unfolded protein response	2.73E-03
66	GO:0043562: cellular response to nitrogen levels	2.73E-03
67	GO:0009699: phenylpropanoid biosynthetic process	2.73E-03
68	GO:0006098: pentose-phosphate shunt	3.08E-03
69	GO:0009821: alkaloid biosynthetic process	3.08E-03
70	GO:0051865: protein autoubiquitination	3.08E-03
71	GO:0009056: catabolic process	3.08E-03
72	GO:0071577: zinc II ion transmembrane transport	3.46E-03
73	GO:0006995: cellular response to nitrogen starvation	3.84E-03
74	GO:0007064: mitotic sister chromatid cohesion	3.84E-03
75	GO:0043069: negative regulation of programmed cell death	3.84E-03
76	GO:0031347: regulation of defense response	4.02E-03
77	GO:0006812: cation transport	4.17E-03
78	GO:0000038: very long-chain fatty acid metabolic process	4.24E-03
79	GO:0006879: cellular iron ion homeostasis	4.24E-03
80	GO:0006790: sulfur compound metabolic process	4.65E-03
81	GO:0012501: programmed cell death	4.65E-03
82	GO:0006807: nitrogen compound metabolic process	5.08E-03
83	GO:0018107: peptidyl-threonine phosphorylation	5.08E-03
84	GO:0009266: response to temperature stimulus	5.52E-03
85	GO:0046854: phosphatidylinositol phosphorylation	5.97E-03
86	GO:0010053: root epidermal cell differentiation	5.97E-03
87	GO:0009751: response to salicylic acid	6.13E-03
88	GO:0006636: unsaturated fatty acid biosynthetic process	6.43E-03
89	GO:0018105: peptidyl-serine phosphorylation	6.54E-03
90	GO:0009863: salicylic acid mediated signaling pathway	6.91E-03
91	GO:0009058: biosynthetic process	8.38E-03
92	GO:0009814: defense response, incompatible interaction	8.42E-03
93	GO:0016226: iron-sulfur cluster assembly	8.42E-03
94	GO:0019748: secondary metabolic process	8.42E-03
95	GO:0006012: galactose metabolic process	8.95E-03
96	GO:0006885: regulation of pH	1.12E-02
97	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.23E-02
98	GO:0006623: protein targeting to vacuole	1.24E-02
99	GO:0009749: response to glucose	1.24E-02
100	GO:0010193: response to ozone	1.30E-02
101	GO:0006635: fatty acid beta-oxidation	1.30E-02
102	GO:0009617: response to bacterium	1.31E-02
103	GO:0016567: protein ubiquitination	1.43E-02
104	GO:0006952: defense response	1.44E-02
105	GO:0006464: cellular protein modification process	1.49E-02
106	GO:0009615: response to virus	1.68E-02
107	GO:0055114: oxidation-reduction process	1.83E-02
108	GO:0016311: dephosphorylation	1.96E-02
109	GO:0080167: response to karrikin	2.12E-02
110	GO:0006499: N-terminal protein myristoylation	2.18E-02
111	GO:0009407: toxin catabolic process	2.18E-02
112	GO:0010218: response to far red light	2.18E-02
113	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.19E-02
114	GO:0010119: regulation of stomatal movement	2.25E-02
115	GO:0010043: response to zinc ion	2.25E-02
116	GO:0006865: amino acid transport	2.33E-02
117	GO:0009637: response to blue light	2.41E-02
118	GO:0007165: signal transduction	2.48E-02
119	GO:0009737: response to abscisic acid	2.57E-02
120	GO:0006631: fatty acid metabolic process	2.72E-02
121	GO:0042542: response to hydrogen peroxide	2.80E-02
122	GO:0010114: response to red light	2.88E-02
123	GO:0009744: response to sucrose	2.88E-02
124	GO:0016042: lipid catabolic process	3.04E-02
125	GO:0006629: lipid metabolic process	3.12E-02
126	GO:0009753: response to jasmonic acid	3.35E-02
127	GO:0042538: hyperosmotic salinity response	3.39E-02
128	GO:0009809: lignin biosynthetic process	3.56E-02
129	GO:0006813: potassium ion transport	3.56E-02
130	GO:0051603: proteolysis involved in cellular protein catabolic process	3.65E-02
131	GO:0010224: response to UV-B	3.65E-02
132	GO:0006857: oligopeptide transport	3.74E-02
133	GO:0006096: glycolytic process	4.01E-02
134	GO:0009620: response to fungus	4.29E-02
135	GO:0006508: proteolysis	4.37E-02
136	GO:0009624: response to nematode	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
4	GO:0008777: acetylornithine deacetylase activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:1990837: sequence-specific double-stranded DNA binding	0.00E+00
7	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.66E-04
8	GO:0015152: glucose-6-phosphate transmembrane transporter activity	3.03E-04
9	GO:0042937: tripeptide transporter activity	3.03E-04
10	GO:0004103: choline kinase activity	3.03E-04
11	GO:0036455: iron-sulfur transferase activity	3.03E-04
12	GO:0010331: gibberellin binding	3.03E-04
13	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	3.03E-04
14	GO:0004674: protein serine/threonine kinase activity	3.92E-04
15	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	4.99E-04
16	GO:0071917: triose-phosphate transmembrane transporter activity	4.99E-04
17	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	7.14E-04
18	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	7.14E-04
19	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	7.14E-04
20	GO:0003995: acyl-CoA dehydrogenase activity	9.47E-04
21	GO:0009916: alternative oxidase activity	9.47E-04
22	GO:0008891: glycolate oxidase activity	9.47E-04
23	GO:0004301: epoxide hydrolase activity	9.47E-04
24	GO:0015120: phosphoglycerate transmembrane transporter activity	9.47E-04
25	GO:0004659: prenyltransferase activity	9.47E-04
26	GO:0042936: dipeptide transporter activity	9.47E-04
27	GO:0016985: mannan endo-1,4-beta-mannosidase activity	9.47E-04
28	GO:0008198: ferrous iron binding	1.20E-03
29	GO:0003997: acyl-CoA oxidase activity	1.20E-03
30	GO:0031386: protein tag	1.20E-03
31	GO:0016301: kinase activity	1.45E-03
32	GO:0004526: ribonuclease P activity	1.47E-03
33	GO:0016462: pyrophosphatase activity	1.47E-03
34	GO:0004866: endopeptidase inhibitor activity	1.47E-03
35	GO:0051213: dioxygenase activity	1.58E-03
36	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	1.76E-03
37	GO:0003978: UDP-glucose 4-epimerase activity	1.76E-03
38	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.76E-03
39	GO:0051920: peroxiredoxin activity	1.76E-03
40	GO:0004427: inorganic diphosphatase activity	2.06E-03
41	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.06E-03
42	GO:0003872: 6-phosphofructokinase activity	2.06E-03
43	GO:0052747: sinapyl alcohol dehydrogenase activity	2.39E-03
44	GO:0016209: antioxidant activity	2.39E-03
45	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.73E-03
46	GO:0004630: phospholipase D activity	2.73E-03
47	GO:0016844: strictosidine synthase activity	3.46E-03
48	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.65E-03
49	GO:0005315: inorganic phosphate transmembrane transporter activity	5.08E-03
50	GO:0005385: zinc ion transmembrane transporter activity	6.91E-03
51	GO:0008324: cation transmembrane transporter activity	7.40E-03
52	GO:0004298: threonine-type endopeptidase activity	7.91E-03
53	GO:0004499: N,N-dimethylaniline monooxygenase activity	9.49E-03
54	GO:0005451: monovalent cation:proton antiporter activity	1.06E-02
55	GO:0046873: metal ion transmembrane transporter activity	1.12E-02
56	GO:0015299: solute:proton antiporter activity	1.18E-02
57	GO:0010181: FMN binding	1.18E-02
58	GO:0004842: ubiquitin-protein transferase activity	1.35E-02
59	GO:0004197: cysteine-type endopeptidase activity	1.36E-02
60	GO:0015385: sodium:proton antiporter activity	1.42E-02
61	GO:0016791: phosphatase activity	1.49E-02
62	GO:0008237: metallopeptidase activity	1.55E-02
63	GO:0004601: peroxidase activity	1.71E-02
64	GO:0005524: ATP binding	1.82E-02
65	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.82E-02
66	GO:0030246: carbohydrate binding	1.88E-02
67	GO:0004806: triglyceride lipase activity	1.89E-02
68	GO:0004683: calmodulin-dependent protein kinase activity	1.89E-02
69	GO:0050660: flavin adenine dinucleotide binding	1.97E-02
70	GO:0008233: peptidase activity	2.08E-02
71	GO:0005516: calmodulin binding	2.17E-02
72	GO:0061630: ubiquitin protein ligase activity	2.23E-02
73	GO:0030145: manganese ion binding	2.25E-02
74	GO:0016787: hydrolase activity	2.59E-02
75	GO:0051539: 4 iron, 4 sulfur cluster binding	2.64E-02
76	GO:0050661: NADP binding	2.64E-02
77	GO:0042803: protein homodimerization activity	2.66E-02
78	GO:0004364: glutathione transferase activity	2.80E-02
79	GO:0035091: phosphatidylinositol binding	3.05E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	3.05E-02
81	GO:0005198: structural molecule activity	3.13E-02
82	GO:0015293: symporter activity	3.13E-02
83	GO:0043565: sequence-specific DNA binding	3.44E-02
84	GO:0016298: lipase activity	3.65E-02
85	GO:0015171: amino acid transmembrane transporter activity	3.83E-02
86	GO:0008234: cysteine-type peptidase activity	3.83E-02
87	GO:0045735: nutrient reservoir activity	4.01E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005782: peroxisomal matrix	4.99E-04
3	GO:0005945: 6-phosphofructokinase complex	1.20E-03
4	GO:0019773: proteasome core complex, alpha-subunit complex	2.73E-03
5	GO:0016021: integral component of membrane	2.95E-03
6	GO:0031090: organelle membrane	3.08E-03
7	GO:0005886: plasma membrane	3.53E-03
8	GO:0005750: mitochondrial respiratory chain complex III	5.52E-03
9	GO:0005764: lysosome	5.52E-03
10	GO:0070469: respiratory chain	7.40E-03
11	GO:0005839: proteasome core complex	7.91E-03
12	GO:0005770: late endosome	1.12E-02
13	GO:0005777: peroxisome	1.54E-02
14	GO:0009707: chloroplast outer membrane	2.03E-02
15	GO:0031969: chloroplast membrane	2.12E-02
16	GO:0005829: cytosol	2.47E-02
17	GO:0005737: cytoplasm	3.33E-02
18	GO:0031966: mitochondrial membrane	3.39E-02
19	GO:0000502: proteasome complex	3.56E-02
20	GO:0005635: nuclear envelope	3.74E-02
21	GO:0005747: mitochondrial respiratory chain complex I	4.11E-02
22	GO:0016607: nuclear speck	4.11E-02