Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G05160

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006593: ornithine catabolic process0.00E+00
2GO:0006482: protein demethylation0.00E+00
3GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
4GO:0042430: indole-containing compound metabolic process0.00E+00
5GO:0002376: immune system process0.00E+00
6GO:0030149: sphingolipid catabolic process0.00E+00
7GO:0006793: phosphorus metabolic process0.00E+00
8GO:0042362: fat-soluble vitamin biosynthetic process0.00E+00
9GO:0001881: receptor recycling0.00E+00
10GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
11GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
12GO:0009626: plant-type hypersensitive response2.90E-05
13GO:0007034: vacuolar transport3.72E-05
14GO:0006631: fatty acid metabolic process1.02E-04
15GO:0050790: regulation of catalytic activity1.62E-04
16GO:0009617: response to bacterium1.83E-04
17GO:0009819: drought recovery2.06E-04
18GO:0080173: male-female gamete recognition during double fertilization2.32E-04
19GO:0010036: response to boron-containing substance2.32E-04
20GO:0033306: phytol metabolic process2.32E-04
21GO:0009962: regulation of flavonoid biosynthetic process2.32E-04
22GO:0080136: priming of cellular response to stress2.32E-04
23GO:0019544: arginine catabolic process to glutamate2.32E-04
24GO:0034214: protein hexamerization2.32E-04
25GO:1900424: regulation of defense response to bacterium2.32E-04
26GO:1903648: positive regulation of chlorophyll catabolic process2.32E-04
27GO:0048508: embryonic meristem development2.32E-04
28GO:0030163: protein catabolic process2.83E-04
29GO:0046685: response to arsenic-containing substance3.09E-04
30GO:0051262: protein tetramerization5.15E-04
31GO:0019521: D-gluconate metabolic process5.15E-04
32GO:0009915: phloem sucrose loading5.15E-04
33GO:0080029: cellular response to boron-containing substance levels5.15E-04
34GO:0019374: galactolipid metabolic process5.15E-04
35GO:0019752: carboxylic acid metabolic process5.15E-04
36GO:1902000: homogentisate catabolic process5.15E-04
37GO:0044419: interspecies interaction between organisms5.15E-04
38GO:0009945: radial axis specification5.15E-04
39GO:0019441: tryptophan catabolic process to kynurenine5.15E-04
40GO:0097054: L-glutamate biosynthetic process5.15E-04
41GO:0051592: response to calcium ion5.15E-04
42GO:0031648: protein destabilization5.15E-04
43GO:0015824: proline transport5.15E-04
44GO:0002237: response to molecule of bacterial origin7.26E-04
45GO:0009266: response to temperature stimulus7.26E-04
46GO:0010447: response to acidic pH8.37E-04
47GO:0009072: aromatic amino acid family metabolic process8.37E-04
48GO:0048281: inflorescence morphogenesis8.37E-04
49GO:0034051: negative regulation of plant-type hypersensitive response8.37E-04
50GO:0010359: regulation of anion channel activity8.37E-04
51GO:0061158: 3'-UTR-mediated mRNA destabilization8.37E-04
52GO:0008333: endosome to lysosome transport8.37E-04
53GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway8.37E-04
54GO:0051646: mitochondrion localization8.37E-04
55GO:0002230: positive regulation of defense response to virus by host8.37E-04
56GO:0071836: nectar secretion8.37E-04
57GO:0010351: lithium ion transport8.37E-04
58GO:0072661: protein targeting to plasma membrane8.37E-04
59GO:0009410: response to xenobiotic stimulus8.37E-04
60GO:0006537: glutamate biosynthetic process1.19E-03
61GO:0015700: arsenite transport1.19E-03
62GO:0080024: indolebutyric acid metabolic process1.19E-03
63GO:0006882: cellular zinc ion homeostasis1.19E-03
64GO:0001676: long-chain fatty acid metabolic process1.19E-03
65GO:0046713: borate transport1.19E-03
66GO:0048194: Golgi vesicle budding1.19E-03
67GO:0009651: response to salt stress1.22E-03
68GO:0016226: iron-sulfur cluster assembly1.31E-03
69GO:0010483: pollen tube reception1.59E-03
70GO:0006536: glutamate metabolic process1.59E-03
71GO:2000038: regulation of stomatal complex development1.59E-03
72GO:0015867: ATP transport1.59E-03
73GO:0019676: ammonia assimilation cycle1.59E-03
74GO:0009247: glycolipid biosynthetic process2.03E-03
75GO:0034052: positive regulation of plant-type hypersensitive response2.03E-03
76GO:0097428: protein maturation by iron-sulfur cluster transfer2.03E-03
77GO:0006623: protein targeting to vacuole2.24E-03
78GO:0070814: hydrogen sulfide biosynthetic process2.50E-03
79GO:1902456: regulation of stomatal opening2.50E-03
80GO:0055114: oxidation-reduction process2.50E-03
81GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.50E-03
82GO:0009228: thiamine biosynthetic process2.50E-03
83GO:0006561: proline biosynthetic process2.50E-03
84GO:0015866: ADP transport2.50E-03
85GO:2000067: regulation of root morphogenesis3.00E-03
86GO:0015977: carbon fixation3.00E-03
87GO:0000911: cytokinesis by cell plate formation3.00E-03
88GO:0009612: response to mechanical stimulus3.00E-03
89GO:0009942: longitudinal axis specification3.00E-03
90GO:0010189: vitamin E biosynthetic process3.00E-03
91GO:0010555: response to mannitol3.00E-03
92GO:2000037: regulation of stomatal complex patterning3.00E-03
93GO:0051607: defense response to virus3.26E-03
94GO:0043090: amino acid import3.54E-03
95GO:0070370: cellular heat acclimation3.54E-03
96GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.54E-03
97GO:0030026: cellular manganese ion homeostasis3.54E-03
98GO:1900057: positive regulation of leaf senescence3.54E-03
99GO:0050829: defense response to Gram-negative bacterium3.54E-03
100GO:0010044: response to aluminum ion3.54E-03
101GO:0009816: defense response to bacterium, incompatible interaction3.65E-03
102GO:0006605: protein targeting4.10E-03
103GO:0019375: galactolipid biosynthetic process4.10E-03
104GO:0016036: cellular response to phosphate starvation4.20E-03
105GO:0010262: somatic embryogenesis4.70E-03
106GO:0007186: G-protein coupled receptor signaling pathway4.70E-03
107GO:0010120: camalexin biosynthetic process4.70E-03
108GO:0009657: plastid organization4.70E-03
109GO:0030968: endoplasmic reticulum unfolded protein response4.70E-03
110GO:0010208: pollen wall assembly4.70E-03
111GO:0009407: toxin catabolic process4.97E-03
112GO:0010043: response to zinc ion5.21E-03
113GO:0006098: pentose-phosphate shunt5.32E-03
114GO:0019432: triglyceride biosynthetic process5.32E-03
115GO:0010112: regulation of systemic acquired resistance5.32E-03
116GO:0006865: amino acid transport5.45E-03
117GO:0046686: response to cadmium ion5.89E-03
118GO:0030042: actin filament depolymerization5.97E-03
119GO:0048268: clathrin coat assembly5.97E-03
120GO:0055062: phosphate ion homeostasis6.65E-03
121GO:0006896: Golgi to vacuole transport6.65E-03
122GO:0000103: sulfate assimilation6.65E-03
123GO:0006032: chitin catabolic process6.65E-03
124GO:0019538: protein metabolic process6.65E-03
125GO:0043069: negative regulation of programmed cell death6.65E-03
126GO:0009698: phenylpropanoid metabolic process7.35E-03
127GO:0006879: cellular iron ion homeostasis7.35E-03
128GO:0000272: polysaccharide catabolic process7.35E-03
129GO:0009750: response to fructose7.35E-03
130GO:0051707: response to other organism7.36E-03
131GO:0009644: response to high light intensity7.96E-03
132GO:0006508: proteolysis8.01E-03
133GO:0006790: sulfur compound metabolic process8.08E-03
134GO:0006970: response to osmotic stress8.80E-03
135GO:0005986: sucrose biosynthetic process8.84E-03
136GO:0010229: inflorescence development8.84E-03
137GO:0031347: regulation of defense response8.91E-03
138GO:0009738: abscisic acid-activated signaling pathway9.11E-03
139GO:0034605: cellular response to heat9.62E-03
140GO:0051603: proteolysis involved in cellular protein catabolic process1.03E-02
141GO:0042343: indole glucosinolate metabolic process1.04E-02
142GO:0090351: seedling development1.04E-02
143GO:0070588: calcium ion transmembrane transport1.04E-02
144GO:0046854: phosphatidylinositol phosphorylation1.04E-02
145GO:0010053: root epidermal cell differentiation1.04E-02
146GO:0009737: response to abscisic acid1.08E-02
147GO:0010200: response to chitin1.10E-02
148GO:0006636: unsaturated fatty acid biosynthetic process1.13E-02
149GO:0044550: secondary metabolite biosynthetic process1.17E-02
150GO:0009863: salicylic acid mediated signaling pathway1.21E-02
151GO:2000377: regulation of reactive oxygen species metabolic process1.21E-02
152GO:0015031: protein transport1.28E-02
153GO:0006874: cellular calcium ion homeostasis1.30E-02
154GO:0045454: cell redox homeostasis1.32E-02
155GO:0016998: cell wall macromolecule catabolic process1.39E-02
156GO:0098542: defense response to other organism1.39E-02
157GO:0009814: defense response, incompatible interaction1.48E-02
158GO:0031348: negative regulation of defense response1.48E-02
159GO:0006817: phosphate ion transport1.67E-02
160GO:0010091: trichome branching1.67E-02
161GO:0016117: carotenoid biosynthetic process1.77E-02
162GO:0042147: retrograde transport, endosome to Golgi1.77E-02
163GO:0006520: cellular amino acid metabolic process1.97E-02
164GO:0061025: membrane fusion2.07E-02
165GO:0006814: sodium ion transport2.07E-02
166GO:0010183: pollen tube guidance2.18E-02
167GO:0009749: response to glucose2.18E-02
168GO:0008654: phospholipid biosynthetic process2.18E-02
169GO:0006633: fatty acid biosynthetic process2.23E-02
170GO:0006635: fatty acid beta-oxidation2.29E-02
171GO:0010193: response to ozone2.29E-02
172GO:0006468: protein phosphorylation2.40E-02
173GO:0016032: viral process2.40E-02
174GO:0006464: cellular protein modification process2.62E-02
175GO:0042742: defense response to bacterium2.75E-02
176GO:0001666: response to hypoxia2.98E-02
177GO:0009615: response to virus2.98E-02
178GO:0006906: vesicle fusion3.22E-02
179GO:0016311: dephosphorylation3.47E-02
180GO:0048481: plant ovule development3.59E-02
181GO:0009611: response to wounding3.64E-02
182GO:0010119: regulation of stomatal movement3.98E-02
183GO:0006099: tricarboxylic acid cycle4.39E-02
184GO:0006839: mitochondrial transport4.67E-02
185GO:0080167: response to karrikin4.69E-02
186GO:0006887: exocytosis4.81E-02
187GO:0006897: endocytosis4.81E-02
188GO:0016192: vesicle-mediated transport4.93E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0015930: glutamate synthase activity0.00E+00
3GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
4GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
5GO:0010176: homogentisate phytyltransferase activity0.00E+00
6GO:0051723: protein methylesterase activity0.00E+00
7GO:0016034: maleylacetoacetate isomerase activity0.00E+00
8GO:0004168: dolichol kinase activity0.00E+00
9GO:0080138: borate uptake transmembrane transporter activity0.00E+00
10GO:0004587: ornithine-oxo-acid transaminase activity0.00E+00
11GO:0102391: decanoate--CoA ligase activity1.68E-06
12GO:0004467: long-chain fatty acid-CoA ligase activity2.72E-06
13GO:0004190: aspartic-type endopeptidase activity4.48E-05
14GO:0051920: peroxiredoxin activity1.23E-04
15GO:0016209: antioxidant activity2.06E-04
16GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity2.32E-04
17GO:0010209: vacuolar sorting signal binding2.32E-04
18GO:0016041: glutamate synthase (ferredoxin) activity2.32E-04
19GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity5.15E-04
20GO:0004061: arylformamidase activity5.15E-04
21GO:0019172: glyoxalase III activity5.15E-04
22GO:0004103: choline kinase activity5.15E-04
23GO:0036455: iron-sulfur transferase activity5.15E-04
24GO:0003958: NADPH-hemoprotein reductase activity5.15E-04
25GO:0015105: arsenite transmembrane transporter activity5.15E-04
26GO:0005515: protein binding7.81E-04
27GO:0046524: sucrose-phosphate synthase activity8.37E-04
28GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity8.37E-04
29GO:0000975: regulatory region DNA binding8.37E-04
30GO:0015193: L-proline transmembrane transporter activity8.37E-04
31GO:0031683: G-protein beta/gamma-subunit complex binding8.37E-04
32GO:0004781: sulfate adenylyltransferase (ATP) activity8.37E-04
33GO:0008964: phosphoenolpyruvate carboxylase activity8.37E-04
34GO:0001664: G-protein coupled receptor binding8.37E-04
35GO:0005198: structural molecule activity1.17E-03
36GO:0046715: borate transmembrane transporter activity1.19E-03
37GO:0004351: glutamate decarboxylase activity1.19E-03
38GO:0005516: calmodulin binding1.36E-03
39GO:0015369: calcium:proton antiporter activity1.59E-03
40GO:0009916: alternative oxidase activity1.59E-03
41GO:0004659: prenyltransferase activity1.59E-03
42GO:0015368: calcium:cation antiporter activity1.59E-03
43GO:0008234: cysteine-type peptidase activity1.67E-03
44GO:0008198: ferrous iron binding2.03E-03
45GO:0031386: protein tag2.03E-03
46GO:0051538: 3 iron, 4 sulfur cluster binding2.03E-03
47GO:0031593: polyubiquitin binding2.50E-03
48GO:0008200: ion channel inhibitor activity2.50E-03
49GO:0030976: thiamine pyrophosphate binding2.50E-03
50GO:0004605: phosphatidate cytidylyltransferase activity2.50E-03
51GO:0004197: cysteine-type endopeptidase activity2.56E-03
52GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.00E-03
53GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.00E-03
54GO:0004012: phospholipid-translocating ATPase activity3.00E-03
55GO:0004602: glutathione peroxidase activity3.00E-03
56GO:0004144: diacylglycerol O-acyltransferase activity3.00E-03
57GO:0005347: ATP transmembrane transporter activity3.00E-03
58GO:0016157: sucrose synthase activity3.00E-03
59GO:0015217: ADP transmembrane transporter activity3.00E-03
60GO:0030170: pyridoxal phosphate binding3.48E-03
61GO:0016831: carboxy-lyase activity3.54E-03
62GO:0102425: myricetin 3-O-glucosyltransferase activity3.54E-03
63GO:0102360: daphnetin 3-O-glucosyltransferase activity3.54E-03
64GO:0008121: ubiquinol-cytochrome-c reductase activity3.54E-03
65GO:0043295: glutathione binding3.54E-03
66GO:0047893: flavonol 3-O-glucosyltransferase activity4.10E-03
67GO:0004033: aldo-keto reductase (NADP) activity4.10E-03
68GO:0015491: cation:cation antiporter activity4.10E-03
69GO:0005524: ATP binding4.60E-03
70GO:0047617: acyl-CoA hydrolase activity5.97E-03
71GO:0042802: identical protein binding6.23E-03
72GO:0004713: protein tyrosine kinase activity6.65E-03
73GO:0004568: chitinase activity6.65E-03
74GO:0005545: 1-phosphatidylinositol binding6.65E-03
75GO:0004364: glutathione transferase activity7.07E-03
76GO:0005509: calcium ion binding7.32E-03
77GO:0008794: arsenate reductase (glutaredoxin) activity7.35E-03
78GO:0005484: SNAP receptor activity7.36E-03
79GO:0004601: peroxidase activity8.01E-03
80GO:0015293: symporter activity8.27E-03
81GO:0004674: protein serine/threonine kinase activity8.59E-03
82GO:0015114: phosphate ion transmembrane transporter activity8.84E-03
83GO:0005388: calcium-transporting ATPase activity8.84E-03
84GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.84E-03
85GO:0005315: inorganic phosphate transmembrane transporter activity8.84E-03
86GO:0004175: endopeptidase activity9.62E-03
87GO:0008061: chitin binding1.04E-02
88GO:0004867: serine-type endopeptidase inhibitor activity1.04E-02
89GO:0015171: amino acid transmembrane transporter activity1.10E-02
90GO:0004725: protein tyrosine phosphatase activity1.13E-02
91GO:0051536: iron-sulfur cluster binding1.21E-02
92GO:0043424: protein histidine kinase binding1.30E-02
93GO:0035251: UDP-glucosyltransferase activity1.39E-02
94GO:0004298: threonine-type endopeptidase activity1.39E-02
95GO:0004707: MAP kinase activity1.39E-02
96GO:0004871: signal transducer activity1.40E-02
97GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.46E-02
98GO:0004722: protein serine/threonine phosphatase activity1.49E-02
99GO:0022891: substrate-specific transmembrane transporter activity1.57E-02
100GO:0003727: single-stranded RNA binding1.67E-02
101GO:0003924: GTPase activity1.73E-02
102GO:0008080: N-acetyltransferase activity1.97E-02
103GO:0004252: serine-type endopeptidase activity1.97E-02
104GO:0003713: transcription coactivator activity1.97E-02
105GO:0030276: clathrin binding1.97E-02
106GO:0005525: GTP binding2.02E-02
107GO:0010181: FMN binding2.07E-02
108GO:0005506: iron ion binding2.69E-02
109GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.74E-02
110GO:0051213: dioxygenase activity2.98E-02
111GO:0015250: water channel activity2.98E-02
112GO:0016887: ATPase activity2.99E-02
113GO:0016787: hydrolase activity3.09E-02
114GO:0003824: catalytic activity3.16E-02
115GO:0009931: calcium-dependent protein serine/threonine kinase activity3.22E-02
116GO:0004721: phosphoprotein phosphatase activity3.34E-02
117GO:0004806: triglyceride lipase activity3.34E-02
118GO:0030247: polysaccharide binding3.34E-02
119GO:0004683: calmodulin-dependent protein kinase activity3.34E-02
120GO:0008757: S-adenosylmethionine-dependent methyltransferase activity3.47E-02
121GO:0008168: methyltransferase activity3.65E-02
122GO:0050897: cobalt ion binding3.98E-02
123GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.98E-02
124GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.25E-02
125GO:0003993: acid phosphatase activity4.39E-02
126GO:0000149: SNARE binding4.53E-02
127GO:0004712: protein serine/threonine/tyrosine kinase activity4.53E-02
128GO:0051539: 4 iron, 4 sulfur cluster binding4.67E-02
129GO:0004672: protein kinase activity4.80E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0046862: chromoplast membrane0.00E+00
3GO:0005886: plasma membrane4.62E-08
4GO:0030139: endocytic vesicle9.11E-06
5GO:0005829: cytosol9.65E-05
6GO:0031901: early endosome membrane3.09E-04
7GO:0005783: endoplasmic reticulum4.73E-04
8GO:0005764: lysosome7.26E-04
9GO:0016328: lateral plasma membrane8.37E-04
10GO:0031902: late endosome membrane9.15E-04
11GO:0032585: multivesicular body membrane1.19E-03
12GO:0000502: proteasome complex1.47E-03
13GO:0005773: vacuole1.50E-03
14GO:0009504: cell plate2.24E-03
15GO:0030904: retromer complex2.50E-03
16GO:0005771: multivesicular body2.50E-03
17GO:0005777: peroxisome3.13E-03
18GO:0005623: cell3.15E-03
19GO:0019773: proteasome core complex, alpha-subunit complex4.70E-03
20GO:0005779: integral component of peroxisomal membrane4.70E-03
21GO:0005737: cytoplasm5.45E-03
22GO:0030665: clathrin-coated vesicle membrane5.97E-03
23GO:0005887: integral component of plasma membrane6.38E-03
24GO:0017119: Golgi transport complex6.65E-03
25GO:0008541: proteasome regulatory particle, lid subcomplex7.35E-03
26GO:0016020: membrane9.61E-03
27GO:0005750: mitochondrial respiratory chain complex III9.62E-03
28GO:0030176: integral component of endoplasmic reticulum membrane1.04E-02
29GO:0005769: early endosome1.13E-02
30GO:0005834: heterotrimeric G-protein complex1.25E-02
31GO:0070469: respiratory chain1.30E-02
32GO:0005839: proteasome core complex1.39E-02
33GO:0005905: clathrin-coated pit1.39E-02
34GO:0015629: actin cytoskeleton1.57E-02
35GO:0005789: endoplasmic reticulum membrane1.75E-02
36GO:0030136: clathrin-coated vesicle1.77E-02
37GO:0005794: Golgi apparatus1.83E-02
38GO:0043231: intracellular membrane-bounded organelle1.95E-02
39GO:0005770: late endosome1.97E-02
40GO:0005759: mitochondrial matrix2.23E-02
41GO:0005622: intracellular2.27E-02
42GO:0005768: endosome2.36E-02
43GO:0071944: cell periphery2.51E-02
44GO:0005774: vacuolar membrane2.72E-02
45GO:0005615: extracellular space2.75E-02
46GO:0048046: apoplast2.98E-02
47GO:0009707: chloroplast outer membrane3.59E-02
48GO:0000151: ubiquitin ligase complex3.59E-02
49GO:0009506: plasmodesma3.70E-02
50GO:0005819: spindle4.53E-02
51GO:0031201: SNARE complex4.81E-02
Gene type



Gene DE type