co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G04800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
2	GO:0032780: negative regulation of ATPase activity	0.00E+00
3	GO:0010111: glyoxysome organization	0.00E+00
4	GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase	0.00E+00
5	GO:0006014: D-ribose metabolic process	8.76E-06
6	GO:0051315: attachment of mitotic spindle microtubules to kinetochore	5.64E-05
7	GO:0007093: mitotic cell cycle checkpoint	5.64E-05
8	GO:0010213: non-photoreactive DNA repair	5.64E-05
9	GO:0019544: arginine catabolic process to glutamate	5.64E-05
10	GO:0019395: fatty acid oxidation	1.37E-04
11	GO:0007584: response to nutrient	1.37E-04
12	GO:0019252: starch biosynthetic process	3.49E-04
13	GO:0010222: stem vascular tissue pattern formation	4.56E-04
14	GO:0070534: protein K63-linked ubiquitination	4.56E-04
15	GO:0033320: UDP-D-xylose biosynthetic process	4.56E-04
16	GO:0010107: potassium ion import	4.56E-04
17	GO:0007094: mitotic spindle assembly checkpoint	5.78E-04
18	GO:0006301: postreplication repair	7.07E-04
19	GO:0042732: D-xylose metabolic process	7.07E-04
20	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	7.07E-04
21	GO:0006574: valine catabolic process	7.07E-04
22	GO:0019509: L-methionine salvage from methylthioadenosine	8.44E-04
23	GO:0006401: RNA catabolic process	9.85E-04
24	GO:0006506: GPI anchor biosynthetic process	1.13E-03
25	GO:0019375: galactolipid biosynthetic process	1.13E-03
26	GO:0006972: hyperosmotic response	1.29E-03
27	GO:0048193: Golgi vesicle transport	1.29E-03
28	GO:0006098: pentose-phosphate shunt	1.45E-03
29	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.45E-03
30	GO:0016485: protein processing	1.97E-03
31	GO:0010053: root epidermal cell differentiation	2.76E-03
32	GO:0009225: nucleotide-sugar metabolic process	2.76E-03
33	GO:0010039: response to iron ion	2.76E-03
34	GO:0071732: cellular response to nitric oxide	2.76E-03
35	GO:0046686: response to cadmium ion	2.85E-03
36	GO:0006406: mRNA export from nucleus	3.18E-03
37	GO:0006289: nucleotide-excision repair	3.18E-03
38	GO:0006633: fatty acid biosynthetic process	3.23E-03
39	GO:0009695: jasmonic acid biosynthetic process	3.40E-03
40	GO:0031408: oxylipin biosynthetic process	3.63E-03
41	GO:0080092: regulation of pollen tube growth	3.86E-03
42	GO:0071369: cellular response to ethylene stimulus	4.10E-03
43	GO:0009306: protein secretion	4.34E-03
44	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.58E-03
45	GO:0010118: stomatal movement	4.83E-03
46	GO:0008654: phospholipid biosynthetic process	5.61E-03
47	GO:0010183: pollen tube guidance	5.61E-03
48	GO:0006891: intra-Golgi vesicle-mediated transport	5.88E-03
49	GO:0006635: fatty acid beta-oxidation	5.88E-03
50	GO:0010583: response to cyclopentenone	6.15E-03
51	GO:0071281: cellular response to iron ion	6.43E-03
52	GO:0006904: vesicle docking involved in exocytosis	7.00E-03
53	GO:0016579: protein deubiquitination	7.29E-03
54	GO:0009853: photorespiration	1.08E-02
55	GO:0045087: innate immune response	1.08E-02
56	GO:0016051: carbohydrate biosynthetic process	1.08E-02
57	GO:0006897: endocytosis	1.22E-02
58	GO:0031347: regulation of defense response	1.48E-02
59	GO:0010224: response to UV-B	1.63E-02
60	GO:0009611: response to wounding	1.82E-02
61	GO:0000398: mRNA splicing, via spliceosome	2.26E-02
62	GO:0006511: ubiquitin-dependent protein catabolic process	2.42E-02
63	GO:0006413: translational initiation	2.87E-02
64	GO:0016036: cellular response to phosphate starvation	2.87E-02
65	GO:0006468: protein phosphorylation	3.17E-02
66	GO:0009414: response to water deprivation	3.52E-02
67	GO:0006970: response to osmotic stress	4.34E-02
68	GO:0009860: pollen tube growth	4.34E-02
69	GO:0015031: protein transport	4.57E-02
70	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0016603: glutaminyl-peptide cyclotransferase activity	0.00E+00
3	GO:0046522: S-methyl-5-thioribose kinase activity	0.00E+00
4	GO:0000384: first spliceosomal transesterification activity	0.00E+00
5	GO:0004180: carboxypeptidase activity	7.23E-07
6	GO:0004747: ribokinase activity	1.27E-05
7	GO:0008865: fructokinase activity	2.31E-05
8	GO:0004594: pantothenate kinase activity	1.37E-04
9	GO:0003988: acetyl-CoA C-acyltransferase activity	1.37E-04
10	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	2.34E-04
11	GO:0004383: guanylate cyclase activity	2.34E-04
12	GO:0001653: peptide receptor activity	3.41E-04
13	GO:0004416: hydroxyacylglutathione hydrolase activity	3.41E-04
14	GO:0004518: nuclease activity	3.99E-04
15	GO:0008453: alanine-glyoxylate transaminase activity	4.56E-04
16	GO:0008236: serine-type peptidase activity	6.60E-04
17	GO:0048040: UDP-glucuronate decarboxylase activity	7.07E-04
18	GO:0070403: NAD+ binding	8.44E-04
19	GO:0008195: phosphatidate phosphatase activity	8.44E-04
20	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	8.44E-04
21	GO:0003730: mRNA 3'-UTR binding	8.44E-04
22	GO:0008235: metalloexopeptidase activity	9.85E-04
23	GO:0004869: cysteine-type endopeptidase inhibitor activity	1.13E-03
24	GO:0005267: potassium channel activity	1.29E-03
25	GO:0004177: aminopeptidase activity	1.97E-03
26	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	3.63E-03
27	GO:0042802: identical protein binding	4.50E-03
28	GO:0047134: protein-disulfide reductase activity	4.58E-03
29	GO:0004527: exonuclease activity	5.09E-03
30	GO:0004791: thioredoxin-disulfide reductase activity	5.35E-03
31	GO:0004197: cysteine-type endopeptidase activity	6.15E-03
32	GO:0003924: GTPase activity	1.00E-02
33	GO:0050897: cobalt ion binding	1.01E-02
34	GO:0003746: translation elongation factor activity	1.08E-02
35	GO:0003697: single-stranded DNA binding	1.08E-02
36	GO:0035091: phosphatidylinositol binding	1.36E-02
37	GO:0051287: NAD binding	1.48E-02
38	GO:0004674: protein serine/threonine kinase activity	1.63E-02
39	GO:0031625: ubiquitin protein ligase binding	1.71E-02
40	GO:0000166: nucleotide binding	1.78E-02
41	GO:0005507: copper ion binding	2.54E-02
42	GO:0030170: pyridoxal phosphate binding	2.58E-02
43	GO:0005524: ATP binding	2.60E-02
44	GO:0008565: protein transporter activity	2.73E-02
45	GO:0005525: GTP binding	2.93E-02
46	GO:0003743: translation initiation factor activity	3.37E-02
47	GO:0003824: catalytic activity	3.95E-02
48	GO:0003676: nucleic acid binding	4.41E-02
49	GO:0050660: flavin adenine dinucleotide binding	4.57E-02
50	GO:0016491: oxidoreductase activity	4.73E-02
51	GO:0061630: ubiquitin protein ligase activity	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0070274: RES complex	0.00E+00
2	GO:0031372: UBC13-MMS2 complex	4.56E-04
3	GO:0072686: mitotic spindle	5.78E-04
4	GO:0000776: kinetochore	5.78E-04
5	GO:0030173: integral component of Golgi membrane	8.44E-04
6	GO:0009514: glyoxysome	1.29E-03
7	GO:0071011: precatalytic spliceosome	1.62E-03
8	GO:0030125: clathrin vesicle coat	1.79E-03
9	GO:0005686: U2 snRNP	1.79E-03
10	GO:0071013: catalytic step 2 spliceosome	1.97E-03
11	GO:0005774: vacuolar membrane	2.41E-03
12	GO:0005905: clathrin-coated pit	3.63E-03
13	GO:0005773: vacuole	5.10E-03
14	GO:0005802: trans-Golgi network	5.54E-03
15	GO:0005768: endosome	6.52E-03
16	GO:0032580: Golgi cisterna membrane	6.71E-03
17	GO:0005778: peroxisomal membrane	7.00E-03
18	GO:0031902: late endosome membrane	1.22E-02
19	GO:0005794: Golgi apparatus	1.48E-02
20	GO:0000502: proteasome complex	1.59E-02
21	GO:0005635: nuclear envelope	1.67E-02
22	GO:0016607: nuclear speck	1.83E-02
23	GO:0005759: mitochondrial matrix	2.82E-02
24	GO:0005886: plasma membrane	3.56E-02
25	GO:0000139: Golgi membrane	4.86E-02