Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G04330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:0071474: cellular hyperosmotic response0.00E+00
3GO:0070584: mitochondrion morphogenesis0.00E+00
4GO:0080065: 4-alpha-methyl-delta7-sterol oxidation2.64E-05
5GO:0000025: maltose catabolic process2.64E-05
6GO:0051262: protein tetramerization6.72E-05
7GO:0051170: nuclear import6.72E-05
8GO:0010600: regulation of auxin biosynthetic process2.39E-04
9GO:0015995: chlorophyll biosynthetic process2.42E-04
10GO:1900425: negative regulation of defense response to bacterium3.78E-04
11GO:0051707: response to other organism4.38E-04
12GO:0010244: response to low fluence blue light stimulus by blue low-fluence system4.53E-04
13GO:0010161: red light signaling pathway5.30E-04
14GO:0009704: de-etiolation6.10E-04
15GO:0010928: regulation of auxin mediated signaling pathway6.10E-04
16GO:0010099: regulation of photomorphogenesis6.94E-04
17GO:0007186: G-protein coupled receptor signaling pathway6.94E-04
18GO:0009641: shade avoidance9.59E-04
19GO:0005983: starch catabolic process1.15E-03
20GO:0006006: glucose metabolic process1.25E-03
21GO:0009718: anthocyanin-containing compound biosynthetic process1.25E-03
22GO:0007623: circadian rhythm1.38E-03
23GO:0006874: cellular calcium ion homeostasis1.78E-03
24GO:0048511: rhythmic process1.90E-03
25GO:0010017: red or far-red light signaling pathway2.02E-03
26GO:0007049: cell cycle2.35E-03
27GO:0008284: positive regulation of cell proliferation2.39E-03
28GO:0080167: response to karrikin2.60E-03
29GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.05E-03
30GO:1901657: glycosyl compound metabolic process3.33E-03
31GO:0016126: sterol biosynthetic process3.91E-03
32GO:0010029: regulation of seed germination4.06E-03
33GO:0000160: phosphorelay signal transduction system4.85E-03
34GO:0010218: response to far red light5.02E-03
35GO:0006811: ion transport5.02E-03
36GO:0009631: cold acclimation5.18E-03
37GO:0016051: carbohydrate biosynthetic process5.52E-03
38GO:0010114: response to red light6.57E-03
39GO:0009640: photomorphogenesis6.57E-03
40GO:0006351: transcription, DNA-templated6.61E-03
41GO:0042538: hyperosmotic salinity response7.69E-03
42GO:0009585: red, far-red light phototransduction8.08E-03
43GO:0043086: negative regulation of catalytic activity9.08E-03
44GO:0009845: seed germination1.28E-02
45GO:0006413: translational initiation1.45E-02
46GO:0006355: regulation of transcription, DNA-templated1.59E-02
47GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.65E-02
48GO:0009409: response to cold1.86E-02
49GO:0006810: transport2.01E-02
50GO:0009658: chloroplast organization2.07E-02
51GO:0005975: carbohydrate metabolic process2.08E-02
52GO:0006970: response to osmotic stress2.19E-02
53GO:0009723: response to ethylene2.30E-02
54GO:0010200: response to chitin2.48E-02
55GO:0015979: photosynthesis2.66E-02
56GO:0045892: negative regulation of transcription, DNA-templated2.78E-02
57GO:0032259: methylation3.10E-02
58GO:0008152: metabolic process3.42E-02
59GO:0009416: response to light stimulus4.80E-02
60GO:0009611: response to wounding4.88E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0090711: FMN hydrolase activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0004134: 4-alpha-glucanotransferase activity2.64E-05
8GO:0005227: calcium activated cation channel activity2.64E-05
9GO:0080079: cellobiose glucosidase activity2.64E-05
10GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.64E-05
11GO:0016630: protochlorophyllide reductase activity6.72E-05
12GO:0000254: C-4 methylsterol oxidase activity1.76E-04
13GO:0004930: G-protein coupled receptor activity2.39E-04
14GO:0004602: glutathione peroxidase activity4.53E-04
15GO:0005261: cation channel activity4.53E-04
16GO:0004564: beta-fructofuranosidase activity6.10E-04
17GO:0000989: transcription factor activity, transcription factor binding7.80E-04
18GO:0004575: sucrose alpha-glucosidase activity8.68E-04
19GO:0004565: beta-galactosidase activity1.25E-03
20GO:0004970: ionotropic glutamate receptor activity1.45E-03
21GO:0005217: intracellular ligand-gated ion channel activity1.45E-03
22GO:0005216: ion channel activity1.78E-03
23GO:0008536: Ran GTPase binding2.65E-03
24GO:0000156: phosphorelay response regulator activity3.33E-03
25GO:0008375: acetylglucosaminyltransferase activity4.22E-03
26GO:0102483: scopolin beta-glucosidase activity4.37E-03
27GO:0008422: beta-glucosidase activity5.86E-03
28GO:0043621: protein self-association6.94E-03
29GO:0046910: pectinesterase inhibitor activity1.45E-02
30GO:0005215: transporter activity1.51E-02
31GO:0003743: translation initiation factor activity1.70E-02
32GO:0003700: transcription factor activity, sequence-specific DNA binding1.82E-02
33GO:0008168: methyltransferase activity2.02E-02
34GO:0003682: chromatin binding2.16E-02
35GO:0003677: DNA binding2.44E-02
36GO:0061630: ubiquitin protein ligase activity2.51E-02
37GO:0016787: hydrolase activity2.94E-02
38GO:0008289: lipid binding4.04E-02
RankGO TermAdjusted P value
1GO:0009501: amyloplast6.10E-04
2GO:0005667: transcription factor complex4.22E-03
3GO:0009707: chloroplast outer membrane4.69E-03
4GO:0009534: chloroplast thylakoid8.14E-03
5GO:0016607: nuclear speck9.29E-03
6GO:0031225: anchored component of membrane1.05E-02
7GO:0005623: cell1.23E-02
8GO:0005618: cell wall1.24E-02
9GO:0009941: chloroplast envelope1.54E-02
10GO:0009505: plant-type cell wall1.72E-02
11GO:0009535: chloroplast thylakoid membrane3.07E-02
12GO:0022626: cytosolic ribosome4.65E-02
Gene type



Gene DE type