Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048867: stem cell fate determination0.00E+00
2GO:0007160: cell-matrix adhesion0.00E+00
3GO:0032012: regulation of ARF protein signal transduction8.19E-08
4GO:0006875: cellular metal ion homeostasis3.00E-06
5GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.11E-05
6GO:0031338: regulation of vesicle fusion1.57E-05
7GO:0051604: protein maturation7.34E-05
8GO:0090630: activation of GTPase activity7.34E-05
9GO:0001927: exocyst assembly7.34E-05
10GO:0016579: protein deubiquitination9.62E-05
11GO:0006624: vacuolar protein processing1.11E-04
12GO:0080119: ER body organization1.11E-04
13GO:0006893: Golgi to plasma membrane transport1.11E-04
14GO:0031936: negative regulation of chromatin silencing1.11E-04
15GO:0010188: response to microbial phytotoxin1.53E-04
16GO:1990937: xylan acetylation1.53E-04
17GO:0034052: positive regulation of plant-type hypersensitive response1.98E-04
18GO:0009697: salicylic acid biosynthetic process1.98E-04
19GO:0006751: glutathione catabolic process2.47E-04
20GO:0045491: xylan metabolic process2.47E-04
21GO:0009846: pollen germination2.91E-04
22GO:0010310: regulation of hydrogen peroxide metabolic process2.97E-04
23GO:0006417: regulation of translation3.47E-04
24GO:0080111: DNA demethylation3.49E-04
25GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.49E-04
26GO:0009642: response to light intensity4.04E-04
27GO:0060321: acceptance of pollen4.60E-04
28GO:0010152: pollen maturation7.65E-04
29GO:0010073: meristem maintenance1.18E-03
30GO:0006874: cellular calcium ion homeostasis1.18E-03
31GO:0006366: transcription from RNA polymerase II promoter1.25E-03
32GO:0015031: protein transport1.29E-03
33GO:0045492: xylan biosynthetic process1.48E-03
34GO:0009561: megagametogenesis1.48E-03
35GO:0006886: intracellular protein transport1.71E-03
36GO:0009816: defense response to bacterium, incompatible interaction2.65E-03
37GO:0008219: cell death3.05E-03
38GO:0009834: plant-type secondary cell wall biogenesis3.25E-03
39GO:0006897: endocytosis4.02E-03
40GO:0000209: protein polyubiquitination4.37E-03
41GO:0006511: ubiquitin-dependent protein catabolic process4.83E-03
42GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.84E-03
43GO:0009626: plant-type hypersensitive response6.11E-03
44GO:0000398: mRNA splicing, via spliceosome7.34E-03
45GO:0016036: cellular response to phosphate starvation9.26E-03
46GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.05E-02
47GO:0008380: RNA splicing1.10E-02
48GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.25E-02
49GO:0009860: pollen tube growth1.39E-02
50GO:0016192: vesicle-mediated transport1.60E-02
51GO:0046777: protein autophosphorylation1.62E-02
52GO:0006869: lipid transport1.87E-02
53GO:0006397: mRNA processing2.09E-02
RankGO TermAdjusted P value
1GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
2GO:0005086: ARF guanyl-nucleotide exchange factor activity3.96E-07
3GO:0003729: mRNA binding8.73E-07
4GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.93E-05
5GO:0001078: transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding4.12E-05
6GO:0004843: thiol-dependent ubiquitin-specific protease activity6.75E-05
7GO:0019829: cation-transporting ATPase activity7.34E-05
8GO:0017137: Rab GTPase binding1.98E-04
9GO:0003730: mRNA 3'-UTR binding2.97E-04
10GO:0005085: guanyl-nucleotide exchange factor activity3.49E-04
11GO:0005388: calcium-transporting ATPase activity8.30E-04
12GO:0030276: clathrin binding1.73E-03
13GO:0016887: ATPase activity3.12E-03
14GO:0005096: GTPase activator activity3.15E-03
15GO:0042393: histone binding3.91E-03
16GO:0005198: structural molecule activity4.60E-03
17GO:0015171: amino acid transmembrane transporter activity5.59E-03
18GO:0016874: ligase activity6.38E-03
19GO:0008026: ATP-dependent helicase activity6.92E-03
20GO:0004386: helicase activity7.06E-03
21GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding8.50E-03
22GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.15E-02
23GO:0003723: RNA binding1.29E-02
24GO:0003682: chromatin binding1.38E-02
25GO:0061630: ubiquitin protein ligase activity1.60E-02
26GO:0005524: ATP binding3.33E-02
27GO:0016740: transferase activity3.53E-02
28GO:0005509: calcium ion binding4.77E-02
RankGO TermAdjusted P value
1GO:0008305: integrin complex0.00E+00
2GO:0032588: trans-Golgi network membrane2.47E-04
3GO:0005681: spliceosomal complex3.70E-04
4GO:0005829: cytosol4.51E-04
5GO:0019013: viral nucleocapsid8.30E-04
6GO:0000139: Golgi membrane1.40E-03
7GO:0000145: exocyst2.08E-03
8GO:0030529: intracellular ribonucleoprotein complex2.55E-03
9GO:0012505: endomembrane system6.51E-03
10GO:0005634: nucleus9.26E-03
11GO:0005794: Golgi apparatus9.55E-03
12GO:0005789: endoplasmic reticulum membrane1.10E-02
13GO:0009506: plasmodesma2.50E-02
14GO:0005774: vacuolar membrane2.50E-02
15GO:0005887: integral component of plasma membrane2.53E-02
16GO:0005802: trans-Golgi network4.28E-02
17GO:0005886: plasma membrane4.56E-02
18GO:0005622: intracellular4.61E-02
Gene type



Gene DE type