Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044249: cellular biosynthetic process0.00E+00
2GO:1903648: positive regulation of chlorophyll catabolic process4.83E-06
3GO:0080173: male-female gamete recognition during double fertilization4.83E-06
4GO:0016050: vesicle organization2.46E-05
5GO:0008333: endosome to lysosome transport2.46E-05
6GO:0006552: leucine catabolic process5.40E-05
7GO:0019509: L-methionine salvage from methylthioadenosine1.11E-04
8GO:1900057: positive regulation of leaf senescence1.32E-04
9GO:0070413: trehalose metabolism in response to stress1.54E-04
10GO:0008202: steroid metabolic process2.27E-04
11GO:0006896: Golgi to vacuole transport2.53E-04
12GO:0071732: cellular response to nitric oxide3.90E-04
13GO:0005992: trehalose biosynthetic process4.48E-04
14GO:0071369: cellular response to ethylene stimulus5.71E-04
15GO:0051028: mRNA transport6.34E-04
16GO:0010051: xylem and phloem pattern formation6.67E-04
17GO:0009958: positive gravitropism7.00E-04
18GO:0006623: protein targeting to vacuole7.68E-04
19GO:0071281: cellular response to iron ion8.71E-04
20GO:0009567: double fertilization forming a zygote and endosperm9.07E-04
21GO:0019760: glucosinolate metabolic process9.07E-04
22GO:0010252: auxin homeostasis9.07E-04
23GO:0009817: defense response to fungus, incompatible interaction1.20E-03
24GO:0006897: endocytosis1.57E-03
25GO:0009553: embryo sac development2.51E-03
26GO:0006413: translational initiation3.53E-03
27GO:0006869: lipid transport6.98E-03
28GO:0006397: mRNA processing7.80E-03
29GO:0048364: root development7.80E-03
30GO:0009738: abscisic acid-activated signaling pathway1.11E-02
31GO:0009611: response to wounding1.15E-02
32GO:0035556: intracellular signal transduction1.18E-02
33GO:0045893: positive regulation of transcription, DNA-templated1.25E-02
34GO:0009414: response to water deprivation1.84E-02
35GO:0006810: transport2.46E-02
36GO:0046686: response to cadmium ion2.57E-02
37GO:0009737: response to abscisic acid3.21E-02
38GO:0009651: response to salt stress4.44E-02
RankGO TermAdjusted P value
1GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
2GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
3GO:0030275: LRR domain binding4.83E-06
4GO:0004485: methylcrotonoyl-CoA carboxylase activity4.83E-06
5GO:0035671: enone reductase activity4.83E-06
6GO:0004075: biotin carboxylase activity2.46E-05
7GO:0004029: aldehyde dehydrogenase (NAD) activity9.04E-05
8GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity2.27E-04
9GO:0004805: trehalose-phosphatase activity2.53E-04
10GO:0000976: transcription regulatory region sequence-specific DNA binding3.06E-04
11GO:0016853: isomerase activity7.34E-04
12GO:0016791: phosphatase activity9.07E-04
13GO:0050897: cobalt ion binding1.32E-03
14GO:0035091: phosphatidylinositol binding1.75E-03
15GO:0031625: ubiquitin protein ligase binding2.17E-03
16GO:0003743: translation initiation factor activity4.12E-03
17GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.36E-03
18GO:0005525: GTP binding1.61E-02
19GO:0044212: transcription regulatory region DNA binding1.87E-02
20GO:0005215: transporter activity2.01E-02
21GO:0004842: ubiquitin-protein transferase activity2.35E-02
22GO:0003729: mRNA binding2.48E-02
23GO:0005524: ATP binding4.05E-02
24GO:0016757: transferase activity, transferring glycosyl groups4.48E-02
RankGO TermAdjusted P value
1GO:0005851: eukaryotic translation initiation factor 2B complex9.04E-05
2GO:0005771: multivesicular body9.04E-05
3GO:0030904: retromer complex9.04E-05
4GO:0005759: mitochondrial matrix1.65E-04
5GO:0043231: intracellular membrane-bounded organelle5.68E-04
6GO:0019898: extrinsic component of membrane7.68E-04
7GO:0000151: ubiquitin ligase complex1.20E-03
8GO:0031902: late endosome membrane1.57E-03
9GO:0005654: nucleoplasm2.93E-03
10GO:0022626: cytosolic ribosome1.10E-02
11GO:0005768: endosome1.73E-02
Gene type



Gene DE type