Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G03070

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061635: regulation of protein complex stability0.00E+00
2GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
3GO:2001294: malonyl-CoA catabolic process0.00E+00
4GO:0015994: chlorophyll metabolic process1.16E-06
5GO:0080051: cutin transport3.00E-05
6GO:0009915: phloem sucrose loading7.58E-05
7GO:0015908: fatty acid transport7.58E-05
8GO:0016122: xanthophyll metabolic process7.58E-05
9GO:0006753: nucleoside phosphate metabolic process1.32E-04
10GO:0048544: recognition of pollen1.41E-04
11GO:0009152: purine ribonucleotide biosynthetic process1.97E-04
12GO:0046653: tetrahydrofolate metabolic process1.97E-04
13GO:0072583: clathrin-dependent endocytosis1.97E-04
14GO:0010222: stem vascular tissue pattern formation2.67E-04
15GO:0080110: sporopollenin biosynthetic process3.42E-04
16GO:0006979: response to oxidative stress4.28E-04
17GO:0010189: vitamin E biosynthetic process5.02E-04
18GO:0015937: coenzyme A biosynthetic process5.88E-04
19GO:0006400: tRNA modification5.88E-04
20GO:0009704: de-etiolation6.76E-04
21GO:0090305: nucleic acid phosphodiester bond hydrolysis8.63E-04
22GO:0000373: Group II intron splicing8.63E-04
23GO:0009773: photosynthetic electron transport in photosystem I1.16E-03
24GO:0005983: starch catabolic process1.27E-03
25GO:0010588: cotyledon vascular tissue pattern formation1.38E-03
26GO:0009266: response to temperature stimulus1.50E-03
27GO:0009625: response to insect2.38E-03
28GO:0009658: chloroplast organization2.46E-03
29GO:0010584: pollen exine formation2.52E-03
30GO:0006810: transport4.32E-03
31GO:0006397: mRNA processing4.66E-03
32GO:0009853: photorespiration6.16E-03
33GO:0006631: fatty acid metabolic process6.94E-03
34GO:0009644: response to high light intensity7.75E-03
35GO:0009611: response to wounding8.09E-03
36GO:0031347: regulation of defense response8.38E-03
37GO:0006417: regulation of translation9.70E-03
38GO:0009058: biosynthetic process1.41E-02
39GO:0042744: hydrogen peroxide catabolic process1.49E-02
40GO:0006470: protein dephosphorylation1.87E-02
41GO:0008380: RNA splicing1.93E-02
42GO:0015979: photosynthesis2.98E-02
43GO:0006886: intracellular protein transport3.15E-02
44GO:0032259: methylation3.47E-02
45GO:0008152: metabolic process3.83E-02
RankGO TermAdjusted P value
1GO:0009976: tocopherol cyclase activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0043394: proteoglycan binding0.00E+00
4GO:0050308: sugar-phosphatase activity3.00E-05
5GO:0010945: CoA pyrophosphatase activity3.00E-05
6GO:0019203: carbohydrate phosphatase activity3.00E-05
7GO:0015245: fatty acid transporter activity3.00E-05
8GO:0032050: clathrin heavy chain binding3.00E-05
9GO:0047746: chlorophyllase activity7.58E-05
10GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.32E-04
11GO:0008864: formyltetrahydrofolate deformylase activity1.32E-04
12GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity1.97E-04
13GO:0004045: aminoacyl-tRNA hydrolase activity2.67E-04
14GO:0000210: NAD+ diphosphatase activity4.20E-04
15GO:2001070: starch binding4.20E-04
16GO:0008138: protein tyrosine/serine/threonine phosphatase activity8.63E-04
17GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.63E-04
18GO:0016787: hydrolase activity1.33E-03
19GO:0030246: carbohydrate binding1.59E-03
20GO:0005528: FK506 binding1.86E-03
21GO:0004176: ATP-dependent peptidase activity2.11E-03
22GO:0050662: coenzyme binding3.09E-03
23GO:0016853: isomerase activity3.09E-03
24GO:0004518: nuclease activity3.55E-03
25GO:0005198: structural molecule activity7.96E-03
26GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.17E-03
27GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.02E-02
28GO:0016491: oxidoreductase activity2.12E-02
29GO:0008168: methyltransferase activity2.26E-02
30GO:0004601: peroxidase activity2.32E-02
31GO:0020037: heme binding2.54E-02
32GO:0008233: peptidase activity2.68E-02
33GO:0016301: kinase activity2.96E-02
34GO:0042803: protein homodimerization activity3.18E-02
35GO:0046872: metal ion binding3.36E-02
36GO:0009055: electron carrier activity3.76E-02
RankGO TermAdjusted P value
1GO:0009575: chromoplast stroma0.00E+00
2GO:0009507: chloroplast4.09E-13
3GO:0009534: chloroplast thylakoid2.62E-08
4GO:0009535: chloroplast thylakoid membrane1.56E-07
5GO:0009941: chloroplast envelope2.59E-06
6GO:0009570: chloroplast stroma6.92E-05
7GO:0030130: clathrin coat of trans-Golgi network vesicle1.32E-04
8GO:0030132: clathrin coat of coated pit1.32E-04
9GO:0009897: external side of plasma membrane1.32E-04
10GO:0009579: thylakoid1.80E-04
11GO:0030529: intracellular ribonucleoprotein complex2.41E-04
12GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)8.63E-04
13GO:0009706: chloroplast inner membrane9.54E-04
14GO:0030125: clathrin vesicle coat1.06E-03
15GO:0009543: chloroplast thylakoid lumen1.18E-03
16GO:0009504: cell plate3.24E-03
17GO:0005778: peroxisomal membrane4.03E-03
18GO:0031977: thylakoid lumen6.94E-03
19GO:0005856: cytoskeleton7.96E-03
20GO:0010287: plastoglobule1.31E-02
21GO:0009524: phragmoplast1.41E-02
22GO:0031969: chloroplast membrane2.71E-02
Gene type



Gene DE type