GO Enrichment Analysis of Co-expressed Genes with
AT4G03020
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0019303: D-ribose catabolic process | 0.00E+00 |
| 3 | GO:0000266: mitochondrial fission | 2.80E-05 |
| 4 | GO:0006422: aspartyl-tRNA aminoacylation | 2.88E-05 |
| 5 | GO:0080178: 5-carbamoylmethyl uridine residue modification | 2.88E-05 |
| 6 | GO:0031538: negative regulation of anthocyanin metabolic process | 7.28E-05 |
| 7 | GO:0006421: asparaginyl-tRNA aminoacylation | 1.27E-04 |
| 8 | GO:0032784: regulation of DNA-templated transcription, elongation | 1.27E-04 |
| 9 | GO:0071494: cellular response to UV-C | 1.27E-04 |
| 10 | GO:0006893: Golgi to plasma membrane transport | 1.89E-04 |
| 11 | GO:0051601: exocyst localization | 1.89E-04 |
| 12 | GO:0048530: fruit morphogenesis | 1.89E-04 |
| 13 | GO:1903830: magnesium ion transmembrane transport | 2.57E-04 |
| 14 | GO:0002098: tRNA wobble uridine modification | 2.57E-04 |
| 15 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.57E-04 |
| 16 | GO:0045116: protein neddylation | 3.30E-04 |
| 17 | GO:0018279: protein N-linked glycosylation via asparagine | 3.30E-04 |
| 18 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 4.06E-04 |
| 19 | GO:0046835: carbohydrate phosphorylation | 4.86E-04 |
| 20 | GO:0042026: protein refolding | 4.86E-04 |
| 21 | GO:0006458: 'de novo' protein folding | 4.86E-04 |
| 22 | GO:0009965: leaf morphogenesis | 5.46E-04 |
| 23 | GO:0015937: coenzyme A biosynthetic process | 5.68E-04 |
| 24 | GO:0006400: tRNA modification | 5.68E-04 |
| 25 | GO:0015693: magnesium ion transport | 5.68E-04 |
| 26 | GO:0010928: regulation of auxin mediated signaling pathway | 6.55E-04 |
| 27 | GO:0035265: organ growth | 6.55E-04 |
| 28 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 6.55E-04 |
| 29 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 6.55E-04 |
| 30 | GO:0016559: peroxisome fission | 6.55E-04 |
| 31 | GO:0060321: acceptance of pollen | 7.44E-04 |
| 32 | GO:0007389: pattern specification process | 7.44E-04 |
| 33 | GO:0009734: auxin-activated signaling pathway | 7.77E-04 |
| 34 | GO:2000024: regulation of leaf development | 8.35E-04 |
| 35 | GO:0006896: Golgi to vacuole transport | 1.03E-03 |
| 36 | GO:0048829: root cap development | 1.03E-03 |
| 37 | GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process | 1.34E-03 |
| 38 | GO:0006446: regulation of translational initiation | 1.45E-03 |
| 39 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.50E-03 |
| 40 | GO:0007031: peroxisome organization | 1.56E-03 |
| 41 | GO:0009116: nucleoside metabolic process | 1.79E-03 |
| 42 | GO:0061077: chaperone-mediated protein folding | 2.04E-03 |
| 43 | GO:0007131: reciprocal meiotic recombination | 2.17E-03 |
| 44 | GO:0007005: mitochondrion organization | 2.17E-03 |
| 45 | GO:0071215: cellular response to abscisic acid stimulus | 2.30E-03 |
| 46 | GO:0009414: response to water deprivation | 2.41E-03 |
| 47 | GO:0008284: positive regulation of cell proliferation | 2.57E-03 |
| 48 | GO:0008033: tRNA processing | 2.70E-03 |
| 49 | GO:0010501: RNA secondary structure unwinding | 2.70E-03 |
| 50 | GO:0048868: pollen tube development | 2.84E-03 |
| 51 | GO:0009791: post-embryonic development | 3.13E-03 |
| 52 | GO:0080156: mitochondrial mRNA modification | 3.28E-03 |
| 53 | GO:0007264: small GTPase mediated signal transduction | 3.43E-03 |
| 54 | GO:0031047: gene silencing by RNA | 3.43E-03 |
| 55 | GO:0030163: protein catabolic process | 3.58E-03 |
| 56 | GO:0010252: auxin homeostasis | 3.73E-03 |
| 57 | GO:0016579: protein deubiquitination | 4.05E-03 |
| 58 | GO:0016126: sterol biosynthetic process | 4.21E-03 |
| 59 | GO:0009911: positive regulation of flower development | 4.21E-03 |
| 60 | GO:0006281: DNA repair | 4.25E-03 |
| 61 | GO:0006974: cellular response to DNA damage stimulus | 4.54E-03 |
| 62 | GO:0048767: root hair elongation | 5.22E-03 |
| 63 | GO:0030001: metal ion transport | 6.50E-03 |
| 64 | GO:0006631: fatty acid metabolic process | 6.69E-03 |
| 65 | GO:0006887: exocytosis | 6.69E-03 |
| 66 | GO:0008283: cell proliferation | 7.08E-03 |
| 67 | GO:0000209: protein polyubiquitination | 7.28E-03 |
| 68 | GO:0055114: oxidation-reduction process | 7.42E-03 |
| 69 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 8.09E-03 |
| 70 | GO:0051301: cell division | 8.18E-03 |
| 71 | GO:0009664: plant-type cell wall organization | 8.29E-03 |
| 72 | GO:0006096: glycolytic process | 9.79E-03 |
| 73 | GO:0016569: covalent chromatin modification | 1.07E-02 |
| 74 | GO:0006413: translational initiation | 1.56E-02 |
| 75 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.78E-02 |
| 76 | GO:0009826: unidimensional cell growth | 2.18E-02 |
| 77 | GO:0007049: cell cycle | 2.42E-02 |
| 78 | GO:0009737: response to abscisic acid | 3.25E-02 |
| 79 | GO:0032259: methylation | 3.34E-02 |
| 80 | GO:0016310: phosphorylation | 3.74E-02 |
| 81 | GO:0009735: response to cytokinin | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0005524: ATP binding | 1.62E-05 |
| 3 | GO:0004815: aspartate-tRNA ligase activity | 2.88E-05 |
| 4 | GO:0008802: betaine-aldehyde dehydrogenase activity | 2.88E-05 |
| 5 | GO:0017049: GTP-Rho binding | 2.88E-05 |
| 6 | GO:0004594: pantothenate kinase activity | 7.28E-05 |
| 7 | GO:0019781: NEDD8 activating enzyme activity | 7.28E-05 |
| 8 | GO:0008253: 5'-nucleotidase activity | 1.27E-04 |
| 9 | GO:0004816: asparagine-tRNA ligase activity | 1.27E-04 |
| 10 | GO:0005093: Rab GDP-dissociation inhibitor activity | 1.27E-04 |
| 11 | GO:0035198: miRNA binding | 1.89E-04 |
| 12 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.57E-04 |
| 13 | GO:0003995: acyl-CoA dehydrogenase activity | 2.57E-04 |
| 14 | GO:0008641: small protein activating enzyme activity | 3.30E-04 |
| 15 | GO:0005546: phosphatidylinositol-4,5-bisphosphate binding | 3.30E-04 |
| 16 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.30E-04 |
| 17 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 4.06E-04 |
| 18 | GO:0004747: ribokinase activity | 4.86E-04 |
| 19 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.86E-04 |
| 20 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 9.29E-04 |
| 21 | GO:0004386: helicase activity | 9.86E-04 |
| 22 | GO:0044183: protein binding involved in protein folding | 1.13E-03 |
| 23 | GO:0015095: magnesium ion transmembrane transporter activity | 1.34E-03 |
| 24 | GO:0031624: ubiquitin conjugating enzyme binding | 1.45E-03 |
| 25 | GO:0008017: microtubule binding | 1.60E-03 |
| 26 | GO:0031418: L-ascorbic acid binding | 1.79E-03 |
| 27 | GO:0005525: GTP binding | 1.91E-03 |
| 28 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 2.04E-03 |
| 29 | GO:0046873: metal ion transmembrane transporter activity | 2.84E-03 |
| 30 | GO:0010181: FMN binding | 2.99E-03 |
| 31 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 3.28E-03 |
| 32 | GO:0016491: oxidoreductase activity | 3.52E-03 |
| 33 | GO:0003924: GTPase activity | 4.25E-03 |
| 34 | GO:0004004: ATP-dependent RNA helicase activity | 4.71E-03 |
| 35 | GO:0005096: GTPase activator activity | 5.22E-03 |
| 36 | GO:0050897: cobalt ion binding | 5.58E-03 |
| 37 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 5.94E-03 |
| 38 | GO:0003697: single-stranded DNA binding | 5.94E-03 |
| 39 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.50E-03 |
| 40 | GO:0043621: protein self-association | 7.48E-03 |
| 41 | GO:0003723: RNA binding | 8.70E-03 |
| 42 | GO:0051082: unfolded protein binding | 1.12E-02 |
| 43 | GO:0016746: transferase activity, transferring acyl groups | 1.14E-02 |
| 44 | GO:0008026: ATP-dependent helicase activity | 1.16E-02 |
| 45 | GO:0016829: lyase activity | 1.38E-02 |
| 46 | GO:0005515: protein binding | 1.44E-02 |
| 47 | GO:0003743: translation initiation factor activity | 1.83E-02 |
| 48 | GO:0008168: methyltransferase activity | 2.18E-02 |
| 49 | GO:0050660: flavin adenine dinucleotide binding | 2.48E-02 |
| 50 | GO:0061630: ubiquitin protein ligase activity | 2.71E-02 |
| 51 | GO:0008289: lipid binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 2.96E-12 |
| 3 | GO:0008541: proteasome regulatory particle, lid subcomplex | 2.37E-05 |
| 4 | GO:0005777: peroxisome | 1.53E-04 |
| 5 | GO:0042646: plastid nucleoid | 1.89E-04 |
| 6 | GO:0033588: Elongator holoenzyme complex | 1.89E-04 |
| 7 | GO:0005737: cytoplasm | 2.50E-04 |
| 8 | GO:0008250: oligosaccharyltransferase complex | 3.30E-04 |
| 9 | GO:0031595: nuclear proteasome complex | 5.68E-04 |
| 10 | GO:0000502: proteasome complex | 6.49E-04 |
| 11 | GO:0090404: pollen tube tip | 1.13E-03 |
| 12 | GO:0009524: phragmoplast | 1.18E-03 |
| 13 | GO:0009506: plasmodesma | 1.42E-03 |
| 14 | GO:0043234: protein complex | 1.67E-03 |
| 15 | GO:0030136: clathrin-coated vesicle | 2.57E-03 |
| 16 | GO:0000145: exocyst | 3.43E-03 |
| 17 | GO:0000151: ubiquitin ligase complex | 5.05E-03 |
| 18 | GO:0005856: cytoskeleton | 7.68E-03 |
| 19 | GO:0005774: vacuolar membrane | 1.20E-02 |
| 20 | GO:0005759: mitochondrial matrix | 1.54E-02 |
| 21 | GO:0009505: plant-type cell wall | 1.91E-02 |
| 22 | GO:0046658: anchored component of plasma membrane | 2.00E-02 |
| 23 | GO:0005789: endoplasmic reticulum membrane | 2.33E-02 |
| 24 | GO:0005874: microtubule | 2.55E-02 |
| 25 | GO:0005783: endoplasmic reticulum | 2.91E-02 |
| 26 | GO:0005794: Golgi apparatus | 3.02E-02 |