GO Enrichment Analysis of Co-expressed Genes with
AT4G02880
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032889: regulation of vacuole fusion, non-autophagic | 0.00E+00 |
| 2 | GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity | 0.00E+00 |
| 3 | GO:0000188: inactivation of MAPK activity | 0.00E+00 |
| 4 | GO:0016236: macroautophagy | 0.00E+00 |
| 5 | GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly | 0.00E+00 |
| 6 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 7 | GO:0008202: steroid metabolic process | 2.07E-05 |
| 8 | GO:1903648: positive regulation of chlorophyll catabolic process | 3.37E-05 |
| 9 | GO:0034063: stress granule assembly | 3.37E-05 |
| 10 | GO:0010603: regulation of cytoplasmic mRNA processing body assembly | 3.37E-05 |
| 11 | GO:0030242: pexophagy | 3.37E-05 |
| 12 | GO:0006397: mRNA processing | 6.71E-05 |
| 13 | GO:0009695: jasmonic acid biosynthetic process | 7.90E-05 |
| 14 | GO:0035542: regulation of SNARE complex assembly | 8.48E-05 |
| 15 | GO:0016197: endosomal transport | 8.48E-05 |
| 16 | GO:0019395: fatty acid oxidation | 8.48E-05 |
| 17 | GO:0006635: fatty acid beta-oxidation | 1.91E-04 |
| 18 | GO:0045324: late endosome to vacuole transport | 2.95E-04 |
| 19 | GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA | 2.95E-04 |
| 20 | GO:0006646: phosphatidylethanolamine biosynthetic process | 2.95E-04 |
| 21 | GO:0010225: response to UV-C | 3.77E-04 |
| 22 | GO:0033962: cytoplasmic mRNA processing body assembly | 5.53E-04 |
| 23 | GO:0017148: negative regulation of translation | 5.53E-04 |
| 24 | GO:1900057: positive regulation of leaf senescence | 6.47E-04 |
| 25 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 6.47E-04 |
| 26 | GO:0006605: protein targeting | 7.44E-04 |
| 27 | GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | 9.49E-04 |
| 28 | GO:0010345: suberin biosynthetic process | 9.49E-04 |
| 29 | GO:0006298: mismatch repair | 1.17E-03 |
| 30 | GO:0009738: abscisic acid-activated signaling pathway | 1.27E-03 |
| 31 | GO:0010143: cutin biosynthetic process | 1.65E-03 |
| 32 | GO:0007033: vacuole organization | 1.78E-03 |
| 33 | GO:0034976: response to endoplasmic reticulum stress | 1.91E-03 |
| 34 | GO:0010025: wax biosynthetic process | 1.91E-03 |
| 35 | GO:0006289: nucleotide-excision repair | 2.05E-03 |
| 36 | GO:0008299: isoprenoid biosynthetic process | 2.19E-03 |
| 37 | GO:0008380: RNA splicing | 2.21E-03 |
| 38 | GO:0031408: oxylipin biosynthetic process | 2.33E-03 |
| 39 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.48E-03 |
| 40 | GO:0009306: protein secretion | 2.78E-03 |
| 41 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.94E-03 |
| 42 | GO:0042335: cuticle development | 3.09E-03 |
| 43 | GO:0000413: protein peptidyl-prolyl isomerization | 3.09E-03 |
| 44 | GO:0010051: xylem and phloem pattern formation | 3.09E-03 |
| 45 | GO:0008654: phospholipid biosynthetic process | 3.59E-03 |
| 46 | GO:0006623: protein targeting to vacuole | 3.59E-03 |
| 47 | GO:0019760: glucosinolate metabolic process | 4.28E-03 |
| 48 | GO:0006886: intracellular protein transport | 4.35E-03 |
| 49 | GO:0006904: vesicle docking involved in exocytosis | 4.46E-03 |
| 50 | GO:0006869: lipid transport | 4.61E-03 |
| 51 | GO:0009816: defense response to bacterium, incompatible interaction | 5.02E-03 |
| 52 | GO:0008219: cell death | 5.79E-03 |
| 53 | GO:0006499: N-terminal protein myristoylation | 6.20E-03 |
| 54 | GO:0009910: negative regulation of flower development | 6.40E-03 |
| 55 | GO:0006897: endocytosis | 7.69E-03 |
| 56 | GO:0009611: response to wounding | 9.39E-03 |
| 57 | GO:0009846: pollen germination | 9.54E-03 |
| 58 | GO:0010224: response to UV-B | 1.03E-02 |
| 59 | GO:0006457: protein folding | 1.19E-02 |
| 60 | GO:0018105: peptidyl-serine phosphorylation | 1.31E-02 |
| 61 | GO:0000398: mRNA splicing, via spliceosome | 1.42E-02 |
| 62 | GO:0009845: seed germination | 1.59E-02 |
| 63 | GO:0006633: fatty acid biosynthetic process | 1.77E-02 |
| 64 | GO:0009414: response to water deprivation | 1.82E-02 |
| 65 | GO:0006470: protein dephosphorylation | 2.08E-02 |
| 66 | GO:0006970: response to osmotic stress | 2.72E-02 |
| 67 | GO:0046777: protein autophosphorylation | 3.16E-02 |
| 68 | GO:0045454: cell redox homeostasis | 3.42E-02 |
| 69 | GO:0007165: signal transduction | 3.89E-02 |
| 70 | GO:0006468: protein phosphorylation | 4.24E-02 |
| 71 | GO:0009873: ethylene-activated signaling pathway | 4.76E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity | 0.00E+00 |
| 2 | GO:0047787: delta4-3-oxosteroid 5beta-reductase activity | 0.00E+00 |
| 3 | GO:0035671: enone reductase activity | 3.37E-05 |
| 4 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 3.37E-05 |
| 5 | GO:0003988: acetyl-CoA C-acyltransferase activity | 8.48E-05 |
| 6 | GO:0004609: phosphatidylserine decarboxylase activity | 8.48E-05 |
| 7 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 8.48E-05 |
| 8 | GO:0004180: carboxypeptidase activity | 1.47E-04 |
| 9 | GO:0005047: signal recognition particle binding | 1.47E-04 |
| 10 | GO:0003729: mRNA binding | 1.55E-04 |
| 11 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 2.18E-04 |
| 12 | GO:0004300: enoyl-CoA hydratase activity | 2.18E-04 |
| 13 | GO:0016004: phospholipase activator activity | 2.95E-04 |
| 14 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 2.95E-04 |
| 15 | GO:0003730: mRNA 3'-UTR binding | 5.53E-04 |
| 16 | GO:0008142: oxysterol binding | 8.45E-04 |
| 17 | GO:0003724: RNA helicase activity | 8.45E-04 |
| 18 | GO:0004386: helicase activity | 1.19E-03 |
| 19 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.40E-03 |
| 20 | GO:0004725: protein tyrosine phosphatase activity | 1.91E-03 |
| 21 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.33E-03 |
| 22 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.35E-03 |
| 23 | GO:0005525: GTP binding | 2.47E-03 |
| 24 | GO:0003756: protein disulfide isomerase activity | 2.78E-03 |
| 25 | GO:0005509: calcium ion binding | 2.90E-03 |
| 26 | GO:0016853: isomerase activity | 3.42E-03 |
| 27 | GO:0003684: damaged DNA binding | 4.28E-03 |
| 28 | GO:0003924: GTPase activity | 5.18E-03 |
| 29 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.21E-03 |
| 30 | GO:0004683: calmodulin-dependent protein kinase activity | 5.40E-03 |
| 31 | GO:0008236: serine-type peptidase activity | 5.60E-03 |
| 32 | GO:0003697: single-stranded DNA binding | 6.82E-03 |
| 33 | GO:0008289: lipid binding | 7.20E-03 |
| 34 | GO:0035091: phosphatidylinositol binding | 8.60E-03 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.06E-03 |
| 36 | GO:0000166: nucleotide binding | 9.19E-03 |
| 37 | GO:0005524: ATP binding | 1.22E-02 |
| 38 | GO:0003779: actin binding | 1.26E-02 |
| 39 | GO:0008026: ATP-dependent helicase activity | 1.34E-02 |
| 40 | GO:0005516: calmodulin binding | 1.39E-02 |
| 41 | GO:0003676: nucleic acid binding | 1.93E-02 |
| 42 | GO:0004842: ubiquitin-protein transferase activity | 2.58E-02 |
| 43 | GO:0003682: chromatin binding | 2.69E-02 |
| 44 | GO:0004672: protein kinase activity | 2.75E-02 |
| 45 | GO:0042803: protein homodimerization activity | 3.54E-02 |
| 46 | GO:0003723: RNA binding | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071942: XPC complex | 0.00E+00 |
| 2 | GO:0000111: nucleotide-excision repair factor 2 complex | 0.00E+00 |
| 3 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 4 | GO:0005684: U2-type spliceosomal complex | 0.00E+00 |
| 5 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 6 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 3.37E-05 |
| 7 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 3.37E-05 |
| 8 | GO:0030897: HOPS complex | 8.48E-05 |
| 9 | GO:0030131: clathrin adaptor complex | 7.44E-04 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 8.45E-04 |
| 11 | GO:0009514: glyoxysome | 8.45E-04 |
| 12 | GO:0005681: spliceosomal complex | 9.21E-04 |
| 13 | GO:0010494: cytoplasmic stress granule | 9.49E-04 |
| 14 | GO:0030125: clathrin vesicle coat | 1.17E-03 |
| 15 | GO:0005686: U2 snRNP | 1.17E-03 |
| 16 | GO:0005765: lysosomal membrane | 1.28E-03 |
| 17 | GO:0019013: viral nucleocapsid | 1.52E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.78E-03 |
| 19 | GO:0043234: protein complex | 1.91E-03 |
| 20 | GO:0005905: clathrin-coated pit | 2.33E-03 |
| 21 | GO:0005770: late endosome | 3.25E-03 |
| 22 | GO:0005794: Golgi apparatus | 3.92E-03 |
| 23 | GO:0000139: Golgi membrane | 4.72E-03 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 4.83E-03 |
| 25 | GO:0000932: P-body | 4.83E-03 |
| 26 | GO:0005788: endoplasmic reticulum lumen | 5.02E-03 |
| 27 | GO:0005634: nucleus | 5.47E-03 |
| 28 | GO:0005643: nuclear pore | 5.79E-03 |
| 29 | GO:0015934: large ribosomal subunit | 6.40E-03 |
| 30 | GO:0031902: late endosome membrane | 7.69E-03 |
| 31 | GO:0005783: endoplasmic reticulum | 1.00E-02 |
| 32 | GO:0005777: peroxisome | 1.06E-02 |
| 33 | GO:0005774: vacuolar membrane | 1.55E-02 |
| 34 | GO:0005768: endosome | 1.68E-02 |
| 35 | GO:0009705: plant-type vacuole membrane | 1.89E-02 |
| 36 | GO:0005886: plasma membrane | 1.96E-02 |
| 37 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.76E-02 |
| 38 | GO:0005730: nucleolus | 3.16E-02 |
| 39 | GO:0005829: cytosol | 3.83E-02 |
| 40 | GO:0043231: intracellular membrane-bounded organelle | 4.26E-02 |