co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02570

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046109: uridine biosynthetic process	0.00E+00
2	GO:0000188: inactivation of MAPK activity	0.00E+00
3	GO:0016236: macroautophagy	0.00E+00
4	GO:0045185: maintenance of protein location	0.00E+00
5	GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly	0.00E+00
6	GO:0006592: ornithine biosynthetic process	0.00E+00
7	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
8	GO:0048227: plasma membrane to endosome transport	0.00E+00
9	GO:0010029: regulation of seed germination	7.95E-06
10	GO:0046686: response to cadmium ion	1.58E-05
11	GO:0098721: uracil import across plasma membrane	3.25E-05
12	GO:0098702: adenine import across plasma membrane	3.25E-05
13	GO:0048455: stamen formation	3.25E-05
14	GO:0098710: guanine import across plasma membrane	3.25E-05
15	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	3.25E-05
16	GO:0030242: pexophagy	3.25E-05
17	GO:0000303: response to superoxide	3.25E-05
18	GO:0035344: hypoxanthine transport	3.25E-05
19	GO:0042325: regulation of phosphorylation	8.18E-05
20	GO:0031648: protein destabilization	8.18E-05
21	GO:0050994: regulation of lipid catabolic process	8.18E-05
22	GO:0051788: response to misfolded protein	8.18E-05
23	GO:0051258: protein polymerization	8.18E-05
24	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.42E-04
25	GO:0006623: protein targeting to vacuole	1.69E-04
26	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.11E-04
27	GO:0048194: Golgi vesicle budding	2.11E-04
28	GO:2001289: lipid X metabolic process	2.11E-04
29	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.11E-04
30	GO:0006809: nitric oxide biosynthetic process	2.11E-04
31	GO:0045324: late endosome to vacuole transport	2.85E-04
32	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	2.85E-04
33	GO:0006542: glutamine biosynthetic process	2.85E-04
34	GO:0033320: UDP-D-xylose biosynthetic process	2.85E-04
35	GO:0010225: response to UV-C	3.65E-04
36	GO:0043248: proteasome assembly	4.48E-04
37	GO:0042732: D-xylose metabolic process	4.48E-04
38	GO:0010358: leaf shaping	4.48E-04
39	GO:0033962: cytoplasmic mRNA processing body assembly	5.36E-04
40	GO:0017148: negative regulation of translation	5.36E-04
41	GO:0048280: vesicle fusion with Golgi apparatus	5.36E-04
42	GO:0046470: phosphatidylcholine metabolic process	6.27E-04
43	GO:0048528: post-embryonic root development	6.27E-04
44	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	6.27E-04
45	GO:0009846: pollen germination	7.02E-04
46	GO:0006605: protein targeting	7.22E-04
47	GO:0009819: drought recovery	7.22E-04
48	GO:0006526: arginine biosynthetic process	8.20E-04
49	GO:0009827: plant-type cell wall modification	8.20E-04
50	GO:0006896: Golgi to vacuole transport	1.13E-03
51	GO:0048765: root hair cell differentiation	1.24E-03
52	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.36E-03
53	GO:0000266: mitochondrial fission	1.36E-03
54	GO:0012501: programmed cell death	1.36E-03
55	GO:0009845: seed germination	1.40E-03
56	GO:0010102: lateral root morphogenesis	1.47E-03
57	GO:0009225: nucleotide-sugar metabolic process	1.72E-03
58	GO:0034976: response to endoplasmic reticulum stress	1.85E-03
59	GO:2000377: regulation of reactive oxygen species metabolic process	1.99E-03
60	GO:0031348: negative regulation of defense response	2.40E-03
61	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.84E-03
62	GO:0042147: retrograde transport, endosome to Golgi	2.84E-03
63	GO:0006970: response to osmotic stress	2.93E-03
64	GO:0042335: cuticle development	3.00E-03
65	GO:0007049: cell cycle	3.03E-03
66	GO:0009651: response to salt stress	3.06E-03
67	GO:0016192: vesicle-mediated transport	3.53E-03
68	GO:0006891: intra-Golgi vesicle-mediated transport	3.63E-03
69	GO:0010193: response to ozone	3.63E-03
70	GO:0016032: viral process	3.80E-03
71	GO:0009630: gravitropism	3.80E-03
72	GO:0007264: small GTPase mediated signal transduction	3.80E-03
73	GO:0030163: protein catabolic process	3.97E-03
74	GO:0015031: protein transport	4.09E-03
75	GO:0006914: autophagy	4.14E-03
76	GO:0051607: defense response to virus	4.49E-03
77	GO:0009816: defense response to bacterium, incompatible interaction	4.85E-03
78	GO:0006974: cellular response to DNA damage stimulus	5.04E-03
79	GO:0042128: nitrate assimilation	5.04E-03
80	GO:0048364: root development	5.15E-03
81	GO:0006888: ER to Golgi vesicle-mediated transport	5.22E-03
82	GO:0030244: cellulose biosynthetic process	5.60E-03
83	GO:0048767: root hair elongation	5.80E-03
84	GO:0006499: N-terminal protein myristoylation	5.99E-03
85	GO:0010119: regulation of stomatal movement	6.19E-03
86	GO:0009873: ethylene-activated signaling pathway	6.37E-03
87	GO:0009867: jasmonic acid mediated signaling pathway	6.60E-03
88	GO:0006631: fatty acid metabolic process	7.43E-03
89	GO:0009744: response to sucrose	7.87E-03
90	GO:0009737: response to abscisic acid	7.88E-03
91	GO:0009555: pollen development	8.75E-03
92	GO:0051301: cell division	9.54E-03
93	GO:0010224: response to UV-B	9.93E-03
94	GO:0006096: glycolytic process	1.09E-02
95	GO:0048367: shoot system development	1.11E-02
96	GO:0006511: ubiquitin-dependent protein catabolic process	1.19E-02
97	GO:0018105: peptidyl-serine phosphorylation	1.27E-02
98	GO:0009790: embryo development	1.62E-02
99	GO:0006979: response to oxidative stress	1.79E-02
100	GO:0010150: leaf senescence	1.83E-02
101	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.98E-02
102	GO:0006470: protein dephosphorylation	2.01E-02
103	GO:0009860: pollen tube growth	2.63E-02
104	GO:0009723: response to ethylene	2.77E-02
105	GO:0048366: leaf development	2.80E-02
106	GO:0080167: response to karrikin	2.91E-02
107	GO:0046777: protein autophosphorylation	3.05E-02
108	GO:0045454: cell redox homeostasis	3.31E-02
109	GO:0016042: lipid catabolic process	3.76E-02
110	GO:0009408: response to heat	3.84E-02
111	GO:0006397: mRNA processing	3.96E-02
112	GO:0006468: protein phosphorylation	3.99E-02
113	GO:0009793: embryo development ending in seed dormancy	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
3	GO:0005548: phospholipid transporter activity	0.00E+00
4	GO:0004012: phospholipid-translocating ATPase activity	5.15E-06
5	GO:0015207: adenine transmembrane transporter activity	3.25E-05
6	GO:0015208: guanine transmembrane transporter activity	3.25E-05
7	GO:0015294: solute:cation symporter activity	3.25E-05
8	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.93E-05
9	GO:0004751: ribose-5-phosphate isomerase activity	1.42E-04
10	GO:0016805: dipeptidase activity	1.42E-04
11	GO:0005093: Rab GDP-dissociation inhibitor activity	1.42E-04
12	GO:0005047: signal recognition particle binding	1.42E-04
13	GO:0001653: peptide receptor activity	2.11E-04
14	GO:0000287: magnesium ion binding	2.77E-04
15	GO:0015210: uracil transmembrane transporter activity	2.85E-04
16	GO:0005496: steroid binding	3.65E-04
17	GO:0004356: glutamate-ammonia ligase activity	3.65E-04
18	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	3.65E-04
19	GO:0005096: GTPase activator activity	3.67E-04
20	GO:0031593: polyubiquitin binding	4.48E-04
21	GO:0048040: UDP-glucuronate decarboxylase activity	4.48E-04
22	GO:0070403: NAD+ binding	5.36E-04
23	GO:0003950: NAD+ ADP-ribosyltransferase activity	5.36E-04
24	GO:0004620: phospholipase activity	6.27E-04
25	GO:0008235: metalloexopeptidase activity	6.27E-04
26	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.22E-04
27	GO:0004630: phospholipase D activity	8.20E-04
28	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	8.20E-04
29	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	9.20E-04
30	GO:0030955: potassium ion binding	1.02E-03
31	GO:0004743: pyruvate kinase activity	1.02E-03
32	GO:0004177: aminopeptidase activity	1.24E-03
33	GO:0019888: protein phosphatase regulator activity	1.47E-03
34	GO:0004725: protein tyrosine phosphatase activity	1.85E-03
35	GO:0043130: ubiquitin binding	1.99E-03
36	GO:0003756: protein disulfide isomerase activity	2.69E-03
37	GO:0003727: single-stranded RNA binding	2.69E-03
38	GO:0016853: isomerase activity	3.31E-03
39	GO:0004872: receptor activity	3.47E-03
40	GO:0008237: metallopeptidase activity	4.32E-03
41	GO:0003924: GTPase activity	4.94E-03
42	GO:0009931: calcium-dependent protein serine/threonine kinase activity	5.04E-03
43	GO:0004683: calmodulin-dependent protein kinase activity	5.22E-03
44	GO:0004674: protein serine/threonine kinase activity	5.48E-03
45	GO:0030145: manganese ion binding	6.19E-03
46	GO:0003746: translation elongation factor activity	6.60E-03
47	GO:0000149: SNARE binding	7.01E-03
48	GO:0005484: SNAP receptor activity	7.87E-03
49	GO:0005515: protein binding	8.37E-03
50	GO:0005524: ATP binding	1.08E-02
51	GO:0022857: transmembrane transporter activity	1.19E-02
52	GO:0005525: GTP binding	1.44E-02
53	GO:0008017: microtubule binding	1.89E-02
54	GO:0042802: identical protein binding	2.17E-02
55	GO:0004842: ubiquitin-protein transferase activity	2.46E-02
56	GO:0004672: protein kinase activity	2.62E-02
57	GO:0003729: mRNA binding	2.65E-02
58	GO:0050660: flavin adenine dinucleotide binding	2.77E-02
59	GO:0061630: ubiquitin protein ligase activity	3.02E-02
60	GO:0042803: protein homodimerization activity	3.42E-02
61	GO:0009055: electron carrier activity	4.04E-02
62	GO:0008289: lipid binding	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0071561: nucleus-vacuole junction	0.00E+00
3	GO:0005829: cytosol	1.38E-07
4	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	3.25E-05
5	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	3.25E-05
6	GO:0005737: cytoplasm	6.04E-05
7	GO:0005770: late endosome	1.45E-04
8	GO:0005773: vacuole	3.14E-04
9	GO:0005802: trans-Golgi network	3.44E-04
10	GO:0030140: trans-Golgi network transport vesicle	4.48E-04
11	GO:0031902: late endosome membrane	5.22E-04
12	GO:0016363: nuclear matrix	5.36E-04
13	GO:0012507: ER to Golgi transport vesicle membrane	7.22E-04
14	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	8.20E-04
15	GO:0008540: proteasome regulatory particle, base subcomplex	1.02E-03
16	GO:0009524: phragmoplast	1.37E-03
17	GO:0005768: endosome	2.65E-03
18	GO:0030136: clathrin-coated vesicle	2.84E-03
19	GO:0005886: plasma membrane	3.14E-03
20	GO:0000932: P-body	4.67E-03
21	GO:0005788: endoplasmic reticulum lumen	4.85E-03
22	GO:0005789: endoplasmic reticulum membrane	5.17E-03
23	GO:0000151: ubiquitin ligase complex	5.60E-03
24	GO:0005643: nuclear pore	5.60E-03
25	GO:0000325: plant-type vacuole	6.19E-03
26	GO:0005819: spindle	7.01E-03
27	GO:0009506: plasmodesma	7.07E-03
28	GO:0031201: SNARE complex	7.43E-03
29	GO:0022626: cytosolic ribosome	8.37E-03
30	GO:0031966: mitochondrial membrane	9.22E-03
31	GO:0005783: endoplasmic reticulum	9.31E-03
32	GO:0000502: proteasome complex	9.69E-03
33	GO:0005635: nuclear envelope	1.02E-02
34	GO:0005794: Golgi apparatus	1.20E-02
35	GO:0005774: vacuolar membrane	1.46E-02
36	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.67E-02
37	GO:0005874: microtubule	2.84E-02