Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G02440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
2GO:0006971: hypotonic response0.00E+00
3GO:0006792: regulation of sulfur utilization0.00E+00
4GO:0010200: response to chitin7.53E-07
5GO:2000022: regulation of jasmonic acid mediated signaling pathway7.24E-06
6GO:0009751: response to salicylic acid3.33E-05
7GO:0050691: regulation of defense response to virus by host7.07E-05
8GO:0033481: galacturonate biosynthetic process7.07E-05
9GO:0016119: carotene metabolic process7.07E-05
10GO:1903507: negative regulation of nucleic acid-templated transcription9.12E-05
11GO:0031347: regulation of defense response1.56E-04
12GO:2000693: positive regulation of seed maturation1.70E-04
13GO:0071497: cellular response to freezing1.70E-04
14GO:0080168: abscisic acid transport2.86E-04
15GO:0019419: sulfate reduction2.86E-04
16GO:0009753: response to jasmonic acid3.69E-04
17GO:0006882: cellular zinc ion homeostasis4.15E-04
18GO:0030154: cell differentiation5.45E-04
19GO:0061088: regulation of sequestering of zinc ion5.53E-04
20GO:0009733: response to auxin5.75E-04
21GO:2000762: regulation of phenylpropanoid metabolic process7.00E-04
22GO:0016123: xanthophyll biosynthetic process7.00E-04
23GO:0010438: cellular response to sulfur starvation7.00E-04
24GO:0060918: auxin transport8.57E-04
25GO:0009267: cellular response to starvation8.57E-04
26GO:0006355: regulation of transcription, DNA-templated9.65E-04
27GO:0010038: response to metal ion1.19E-03
28GO:0050829: defense response to Gram-negative bacterium1.19E-03
29GO:0010439: regulation of glucosinolate biosynthetic process1.37E-03
30GO:2000070: regulation of response to water deprivation1.37E-03
31GO:0030162: regulation of proteolysis1.37E-03
32GO:2000031: regulation of salicylic acid mediated signaling pathway1.56E-03
33GO:0000103: sulfate assimilation2.19E-03
34GO:0043069: negative regulation of programmed cell death2.19E-03
35GO:0000272: polysaccharide catabolic process2.41E-03
36GO:0010015: root morphogenesis2.41E-03
37GO:0000038: very long-chain fatty acid metabolic process2.41E-03
38GO:0018107: peptidyl-threonine phosphorylation2.88E-03
39GO:0006829: zinc II ion transport2.88E-03
40GO:0006357: regulation of transcription from RNA polymerase II promoter3.08E-03
41GO:0010540: basipetal auxin transport3.12E-03
42GO:0034605: cellular response to heat3.12E-03
43GO:0002237: response to molecule of bacterial origin3.12E-03
44GO:0009225: nucleotide-sugar metabolic process3.37E-03
45GO:0006351: transcription, DNA-templated3.78E-03
46GO:0019344: cysteine biosynthetic process3.89E-03
47GO:0009738: abscisic acid-activated signaling pathway4.27E-03
48GO:0035556: intracellular signal transduction4.77E-03
49GO:0040007: growth5.02E-03
50GO:0045893: positive regulation of transcription, DNA-templated5.31E-03
51GO:0019722: calcium-mediated signaling5.32E-03
52GO:0000271: polysaccharide biosynthetic process5.93E-03
53GO:0010087: phloem or xylem histogenesis5.93E-03
54GO:0009741: response to brassinosteroid6.24E-03
55GO:0045489: pectin biosynthetic process6.24E-03
56GO:0006970: response to osmotic stress7.93E-03
57GO:0009828: plant-type cell wall loosening8.25E-03
58GO:0009723: response to ethylene8.51E-03
59GO:0007267: cell-cell signaling8.61E-03
60GO:0001666: response to hypoxia9.34E-03
61GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.71E-03
62GO:0010411: xyloglucan metabolic process1.05E-02
63GO:0009414: response to water deprivation1.06E-02
64GO:0045454: cell redox homeostasis1.09E-02
65GO:0048527: lateral root development1.25E-02
66GO:0010043: response to zinc ion1.25E-02
67GO:0016051: carbohydrate biosynthetic process1.33E-02
68GO:0042542: response to hydrogen peroxide1.55E-02
69GO:0042546: cell wall biogenesis1.64E-02
70GO:0009873: ethylene-activated signaling pathway1.75E-02
71GO:0006855: drug transmembrane transport1.77E-02
72GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.82E-02
73GO:0009734: auxin-activated signaling pathway1.91E-02
74GO:0009809: lignin biosynthetic process1.97E-02
75GO:0009611: response to wounding2.46E-02
76GO:0018105: peptidyl-serine phosphorylation2.58E-02
77GO:0009737: response to abscisic acid2.83E-02
78GO:0006952: defense response3.03E-02
79GO:0009845: seed germination3.14E-02
80GO:0006633: fatty acid biosynthetic process3.49E-02
81GO:0007623: circadian rhythm3.73E-02
82GO:0009739: response to gibberellin4.04E-02
83GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.04E-02
84GO:0050832: defense response to fungus4.27E-02
85GO:0071555: cell wall organization4.84E-02
86GO:0042742: defense response to bacterium4.84E-02
87GO:0009826: unidimensional cell growth4.95E-02
RankGO TermAdjusted P value
1GO:0043565: sequence-specific DNA binding2.90E-05
2GO:0090440: abscisic acid transporter activity7.07E-05
3GO:0004328: formamidase activity7.07E-05
4GO:0080132: fatty acid alpha-hydroxylase activity7.07E-05
5GO:0009973: adenylyl-sulfate reductase activity1.70E-04
6GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.70E-04
7GO:0010291: carotene beta-ring hydroxylase activity1.70E-04
8GO:0001047: core promoter binding1.70E-04
9GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.70E-04
10GO:0003714: transcription corepressor activity2.00E-04
11GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides4.15E-04
12GO:0044212: transcription regulatory region DNA binding4.67E-04
13GO:0050378: UDP-glucuronate 4-epimerase activity5.53E-04
14GO:0010427: abscisic acid binding8.57E-04
15GO:0016161: beta-amylase activity1.02E-03
16GO:0016621: cinnamoyl-CoA reductase activity1.19E-03
17GO:0015103: inorganic anion transmembrane transporter activity1.19E-03
18GO:0003700: transcription factor activity, sequence-specific DNA binding1.40E-03
19GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.66E-03
20GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.90E-03
21GO:0004864: protein phosphatase inhibitor activity2.19E-03
22GO:0003712: transcription cofactor activity3.37E-03
23GO:0005385: zinc ion transmembrane transporter activity3.89E-03
24GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity4.73E-03
25GO:0004402: histone acetyltransferase activity5.93E-03
26GO:0046873: metal ion transmembrane transporter activity6.24E-03
27GO:0001085: RNA polymerase II transcription factor binding6.24E-03
28GO:0004872: receptor activity6.89E-03
29GO:0016762: xyloglucan:xyloglucosyl transferase activity7.22E-03
30GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.90E-03
31GO:0016798: hydrolase activity, acting on glycosyl bonds1.05E-02
32GO:0015238: drug transmembrane transporter activity1.17E-02
33GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.25E-02
34GO:0031625: ubiquitin protein ligase binding2.11E-02
35GO:0045735: nutrient reservoir activity2.21E-02
36GO:0015035: protein disulfide oxidoreductase activity2.58E-02
37GO:0005515: protein binding2.61E-02
38GO:0016758: transferase activity, transferring hexosyl groups2.91E-02
39GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.25E-02
40GO:0015297: antiporter activity3.61E-02
41GO:0042802: identical protein binding4.42E-02
42GO:0005506: iron ion binding4.76E-02
43GO:0008270: zinc ion binding4.94E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0009505: plant-type cell wall3.24E-03
3GO:0005615: extracellular space5.33E-03
4GO:0005770: late endosome6.24E-03
5GO:0032580: Golgi cisterna membrane8.25E-03
6GO:0005794: Golgi apparatus9.80E-03
7GO:0005667: transcription factor complex1.01E-02
8GO:0019005: SCF ubiquitin ligase complex1.13E-02
9GO:0031902: late endosome membrane1.50E-02
10GO:0048046: apoplast1.62E-02
11GO:0005634: nucleus1.63E-02
Gene type



Gene DE type