co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02380

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072722: response to amitrole	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0051245: negative regulation of cellular defense response	0.00E+00
4	GO:0015690: aluminum cation transport	0.00E+00
5	GO:0042430: indole-containing compound metabolic process	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:0009617: response to bacterium	5.06E-16
8	GO:0010120: camalexin biosynthetic process	7.32E-08
9	GO:0071456: cellular response to hypoxia	8.43E-08
10	GO:0009682: induced systemic resistance	3.83E-07
11	GO:0050832: defense response to fungus	8.04E-07
12	GO:0042742: defense response to bacterium	9.71E-07
13	GO:0010112: regulation of systemic acquired resistance	9.75E-06
14	GO:0051707: response to other organism	9.82E-06
15	GO:0043069: negative regulation of programmed cell death	1.73E-05
16	GO:0055114: oxidation-reduction process	1.88E-05
17	GO:0052544: defense response by callose deposition in cell wall	2.23E-05
18	GO:0006612: protein targeting to membrane	2.31E-05
19	GO:0009627: systemic acquired resistance	4.12E-05
20	GO:0010363: regulation of plant-type hypersensitive response	4.19E-05
21	GO:0006979: response to oxidative stress	4.78E-05
22	GO:0070588: calcium ion transmembrane transport	5.11E-05
23	GO:0000162: tryptophan biosynthetic process	6.08E-05
24	GO:0009697: salicylic acid biosynthetic process	6.67E-05
25	GO:0009407: toxin catabolic process	6.71E-05
26	GO:0009863: salicylic acid mediated signaling pathway	7.15E-05
27	GO:0080167: response to karrikin	8.79E-05
28	GO:0010200: response to chitin	9.54E-05
29	GO:0009759: indole glucosinolate biosynthetic process	9.77E-05
30	GO:0009636: response to toxic substance	1.69E-04
31	GO:0046686: response to cadmium ion	1.93E-04
32	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.25E-04
33	GO:0080120: CAAX-box protein maturation	2.46E-04
34	GO:0071586: CAAX-box protein processing	2.46E-04
35	GO:0009609: response to symbiotic bacterium	2.46E-04
36	GO:0033306: phytol metabolic process	2.46E-04
37	GO:0009700: indole phytoalexin biosynthetic process	2.46E-04
38	GO:0055081: anion homeostasis	2.46E-04
39	GO:0010230: alternative respiration	2.46E-04
40	GO:0009626: plant-type hypersensitive response	3.36E-04
41	GO:0009615: response to virus	4.34E-04
42	GO:0009737: response to abscisic acid	4.69E-04
43	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.44E-04
44	GO:0090057: root radial pattern formation	5.44E-04
45	GO:0044419: interspecies interaction between organisms	5.44E-04
46	GO:0031349: positive regulation of defense response	5.44E-04
47	GO:0019752: carboxylic acid metabolic process	5.44E-04
48	GO:0002213: defense response to insect	6.18E-04
49	GO:0002237: response to molecule of bacterial origin	7.88E-04
50	GO:0006952: defense response	8.19E-04
51	GO:0042343: indole glucosinolate metabolic process	8.79E-04
52	GO:0072661: protein targeting to plasma membrane	8.83E-04
53	GO:0010272: response to silver ion	8.83E-04
54	GO:0048281: inflorescence morphogenesis	8.83E-04
55	GO:0034051: negative regulation of plant-type hypersensitive response	8.83E-04
56	GO:0010150: leaf senescence	9.41E-04
57	GO:0080147: root hair cell development	1.08E-03
58	GO:0001676: long-chain fatty acid metabolic process	1.26E-03
59	GO:0046836: glycolipid transport	1.26E-03
60	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.26E-03
61	GO:0019438: aromatic compound biosynthetic process	1.26E-03
62	GO:0048194: Golgi vesicle budding	1.26E-03
63	GO:0043207: response to external biotic stimulus	1.26E-03
64	GO:0010148: transpiration	1.26E-03
65	GO:0009855: determination of bilateral symmetry	1.26E-03
66	GO:0048278: vesicle docking	1.30E-03
67	GO:0031348: negative regulation of defense response	1.42E-03
68	GO:0009651: response to salt stress	1.53E-03
69	GO:0009625: response to insect	1.55E-03
70	GO:1901141: regulation of lignin biosynthetic process	1.68E-03
71	GO:0046345: abscisic acid catabolic process	1.68E-03
72	GO:0042273: ribosomal large subunit biogenesis	1.68E-03
73	GO:0010508: positive regulation of autophagy	1.68E-03
74	GO:0080142: regulation of salicylic acid biosynthetic process	1.68E-03
75	GO:0010197: polar nucleus fusion	2.12E-03
76	GO:0034052: positive regulation of plant-type hypersensitive response	2.15E-03
77	GO:0000304: response to singlet oxygen	2.15E-03
78	GO:0006564: L-serine biosynthetic process	2.15E-03
79	GO:0006468: protein phosphorylation	2.17E-03
80	GO:0061025: membrane fusion	2.27E-03
81	GO:0009620: response to fungus	2.28E-03
82	GO:0006561: proline biosynthetic process	2.65E-03
83	GO:0060918: auxin transport	2.65E-03
84	GO:0044550: secondary metabolite biosynthetic process	2.87E-03
85	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.18E-03
86	GO:0009094: L-phenylalanine biosynthetic process	3.18E-03
87	GO:1902074: response to salt	3.75E-03
88	GO:0009610: response to symbiotic fungus	3.75E-03
89	GO:0043090: amino acid import	3.75E-03
90	GO:1900056: negative regulation of leaf senescence	3.75E-03
91	GO:0080186: developmental vegetative growth	3.75E-03
92	GO:0070370: cellular heat acclimation	3.75E-03
93	GO:0009816: defense response to bacterium, incompatible interaction	3.98E-03
94	GO:0006906: vesicle fusion	4.20E-03
95	GO:0050821: protein stabilization	4.35E-03
96	GO:0048658: anther wall tapetum development	4.35E-03
97	GO:0031540: regulation of anthocyanin biosynthetic process	4.35E-03
98	GO:0006102: isocitrate metabolic process	4.35E-03
99	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.35E-03
100	GO:0009819: drought recovery	4.35E-03
101	GO:0030091: protein repair	4.35E-03
102	GO:0008219: cell death	4.90E-03
103	GO:0009817: defense response to fungus, incompatible interaction	4.90E-03
104	GO:0043562: cellular response to nitrogen levels	4.98E-03
105	GO:0009699: phenylpropanoid biosynthetic process	4.98E-03
106	GO:0010204: defense response signaling pathway, resistance gene-independent	4.98E-03
107	GO:0019432: triglyceride biosynthetic process	5.65E-03
108	GO:0080144: amino acid homeostasis	5.65E-03
109	GO:0010119: regulation of stomatal movement	5.67E-03
110	GO:0007166: cell surface receptor signaling pathway	6.07E-03
111	GO:0009867: jasmonic acid mediated signaling pathway	6.21E-03
112	GO:0045087: innate immune response	6.21E-03
113	GO:0030042: actin filament depolymerization	6.33E-03
114	GO:0006099: tricarboxylic acid cycle	6.50E-03
115	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.06E-03
116	GO:0006032: chitin catabolic process	7.06E-03
117	GO:0006887: exocytosis	7.39E-03
118	GO:0000272: polysaccharide catabolic process	7.80E-03
119	GO:0015706: nitrate transport	8.58E-03
120	GO:0009718: anthocyanin-containing compound biosynthetic process	9.38E-03
121	GO:0009414: response to water deprivation	9.38E-03
122	GO:0006006: glucose metabolic process	9.38E-03
123	GO:0006970: response to osmotic stress	9.81E-03
124	GO:0034605: cellular response to heat	1.02E-02
125	GO:0006541: glutamine metabolic process	1.02E-02
126	GO:0010053: root epidermal cell differentiation	1.11E-02
127	GO:0010167: response to nitrate	1.11E-02
128	GO:0046688: response to copper ion	1.11E-02
129	GO:0010224: response to UV-B	1.12E-02
130	GO:0006096: glycolytic process	1.28E-02
131	GO:2000377: regulation of reactive oxygen species metabolic process	1.29E-02
132	GO:0005992: trehalose biosynthetic process	1.29E-02
133	GO:0000027: ribosomal large subunit assembly	1.29E-02
134	GO:0006825: copper ion transport	1.38E-02
135	GO:0016998: cell wall macromolecule catabolic process	1.47E-02
136	GO:0098542: defense response to other organism	1.47E-02
137	GO:0006334: nucleosome assembly	1.47E-02
138	GO:0009814: defense response, incompatible interaction	1.57E-02
139	GO:0016226: iron-sulfur cluster assembly	1.57E-02
140	GO:0001944: vasculature development	1.67E-02
141	GO:0009411: response to UV	1.67E-02
142	GO:0009561: megagametogenesis	1.77E-02
143	GO:0032259: methylation	1.82E-02
144	GO:0070417: cellular response to cold	1.88E-02
145	GO:0009751: response to salicylic acid	1.89E-02
146	GO:0009408: response to heat	1.92E-02
147	GO:0042391: regulation of membrane potential	1.99E-02
148	GO:0080022: primary root development	1.99E-02
149	GO:0009960: endosperm development	2.09E-02
150	GO:0009958: positive gravitropism	2.09E-02
151	GO:0006520: cellular amino acid metabolic process	2.09E-02
152	GO:0009646: response to absence of light	2.21E-02
153	GO:0048544: recognition of pollen	2.21E-02
154	GO:0009851: auxin biosynthetic process	2.32E-02
155	GO:0006635: fatty acid beta-oxidation	2.43E-02
156	GO:0000302: response to reactive oxygen species	2.43E-02
157	GO:0010193: response to ozone	2.43E-02
158	GO:0032502: developmental process	2.55E-02
159	GO:0009630: gravitropism	2.55E-02
160	GO:0006508: proteolysis	2.56E-02
161	GO:0019760: glucosinolate metabolic process	2.79E-02
162	GO:0001666: response to hypoxia	3.16E-02
163	GO:0042128: nitrate assimilation	3.42E-02
164	GO:0016049: cell growth	3.69E-02
165	GO:0009611: response to wounding	4.04E-02
166	GO:0010043: response to zinc ion	4.24E-02
167	GO:0007568: aging	4.24E-02
168	GO:0048527: lateral root development	4.24E-02
169	GO:0006865: amino acid transport	4.38E-02
170	GO:0009723: response to ethylene	4.76E-02
171	GO:0009409: response to cold	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
5	GO:0005507: copper ion binding	1.31E-05
6	GO:0005516: calmodulin binding	1.61E-05
7	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.23E-05
8	GO:0005388: calcium-transporting ATPase activity	3.48E-05
9	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.32E-05
10	GO:0050660: flavin adenine dinucleotide binding	7.40E-05
11	GO:0004364: glutathione transferase activity	1.28E-04
12	GO:0004656: procollagen-proline 4-dioxygenase activity	1.34E-04
13	GO:0043295: glutathione binding	1.77E-04
14	GO:0051287: NAD binding	1.92E-04
15	GO:0005506: iron ion binding	2.14E-04
16	GO:2001227: quercitrin binding	2.46E-04
17	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.46E-04
18	GO:0004048: anthranilate phosphoribosyltransferase activity	2.46E-04
19	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.46E-04
20	GO:2001147: camalexin binding	2.46E-04
21	GO:0009055: electron carrier activity	2.55E-04
22	GO:0019825: oxygen binding	3.83E-04
23	GO:0005524: ATP binding	5.41E-04
24	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.44E-04
25	GO:0004634: phosphopyruvate hydratase activity	5.44E-04
26	GO:0004617: phosphoglycerate dehydrogenase activity	5.44E-04
27	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	5.44E-04
28	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	5.44E-04
29	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.44E-04
30	GO:0048531: beta-1,3-galactosyltransferase activity	5.44E-04
31	GO:0050897: cobalt ion binding	7.31E-04
32	GO:0004049: anthranilate synthase activity	8.83E-04
33	GO:0016531: copper chaperone activity	8.83E-04
34	GO:0004148: dihydrolipoyl dehydrogenase activity	8.83E-04
35	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	1.26E-03
36	GO:0017089: glycolipid transporter activity	1.26E-03
37	GO:0035529: NADH pyrophosphatase activity	1.26E-03
38	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.26E-03
39	GO:0004674: protein serine/threonine kinase activity	1.55E-03
40	GO:0047769: arogenate dehydratase activity	1.68E-03
41	GO:0004834: tryptophan synthase activity	1.68E-03
42	GO:0004664: prephenate dehydratase activity	1.68E-03
43	GO:0051861: glycolipid binding	1.68E-03
44	GO:0043495: protein anchor	1.68E-03
45	GO:0047631: ADP-ribose diphosphatase activity	2.15E-03
46	GO:0010294: abscisic acid glucosyltransferase activity	2.15E-03
47	GO:0020037: heme binding	2.28E-03
48	GO:0030976: thiamine pyrophosphate binding	2.65E-03
49	GO:0000210: NAD+ diphosphatase activity	2.65E-03
50	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.65E-03
51	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	2.65E-03
52	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.18E-03
53	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.18E-03
54	GO:0102391: decanoate--CoA ligase activity	3.18E-03
55	GO:0004012: phospholipid-translocating ATPase activity	3.18E-03
56	GO:0004144: diacylglycerol O-acyltransferase activity	3.18E-03
57	GO:0016597: amino acid binding	3.55E-03
58	GO:0004467: long-chain fatty acid-CoA ligase activity	3.75E-03
59	GO:0016831: carboxy-lyase activity	3.75E-03
60	GO:0016301: kinase activity	4.27E-03
61	GO:0004033: aldo-keto reductase (NADP) activity	4.35E-03
62	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.66E-03
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.68E-03
64	GO:0004222: metalloendopeptidase activity	5.41E-03
65	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.21E-03
66	GO:0015112: nitrate transmembrane transporter activity	6.33E-03
67	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.33E-03
68	GO:0000149: SNARE binding	6.78E-03
69	GO:0004568: chitinase activity	7.06E-03
70	GO:0008171: O-methyltransferase activity	7.06E-03
71	GO:0015020: glucuronosyltransferase activity	7.06E-03
72	GO:0004713: protein tyrosine kinase activity	7.06E-03
73	GO:0050661: NADP binding	7.08E-03
74	GO:0008559: xenobiotic-transporting ATPase activity	7.80E-03
75	GO:0004129: cytochrome-c oxidase activity	7.80E-03
76	GO:0005484: SNAP receptor activity	8.02E-03
77	GO:0000287: magnesium ion binding	8.71E-03
78	GO:0005262: calcium channel activity	9.38E-03
79	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.38E-03
80	GO:0004022: alcohol dehydrogenase (NAD) activity	9.38E-03
81	GO:0004175: endopeptidase activity	1.02E-02
82	GO:0004190: aspartic-type endopeptidase activity	1.11E-02
83	GO:0030552: cAMP binding	1.11E-02
84	GO:0004867: serine-type endopeptidase inhibitor activity	1.11E-02
85	GO:0030553: cGMP binding	1.11E-02
86	GO:0008061: chitin binding	1.11E-02
87	GO:0008233: peptidase activity	1.15E-02
88	GO:0004497: monooxygenase activity	1.17E-02
89	GO:0031418: L-ascorbic acid binding	1.29E-02
90	GO:0005528: FK506 binding	1.29E-02
91	GO:0005216: ion channel activity	1.38E-02
92	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.41E-02
93	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.41E-02
94	GO:0004298: threonine-type endopeptidase activity	1.47E-02
95	GO:0016746: transferase activity, transferring acyl groups	1.59E-02
96	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.77E-02
97	GO:0004672: protein kinase activity	1.90E-02
98	GO:0005249: voltage-gated potassium channel activity	1.99E-02
99	GO:0030551: cyclic nucleotide binding	1.99E-02
100	GO:0005509: calcium ion binding	2.77E-02
101	GO:0043565: sequence-specific DNA binding	2.79E-02
102	GO:0008237: metallopeptidase activity	2.91E-02
103	GO:0008194: UDP-glycosyltransferase activity	2.99E-02
104	GO:0004683: calmodulin-dependent protein kinase activity	3.55E-02
105	GO:0030247: polysaccharide binding	3.55E-02
106	GO:0015238: drug transmembrane transporter activity	3.96E-02
107	GO:0008168: methyltransferase activity	3.98E-02
108	GO:0030145: manganese ion binding	4.24E-02
109	GO:0003697: single-stranded DNA binding	4.52E-02
110	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.66E-02
111	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.81E-02
112	GO:0042393: histone binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.51E-10
2	GO:0005740: mitochondrial envelope	4.67E-04
3	GO:0000015: phosphopyruvate hydratase complex	5.44E-04
4	GO:0005901: caveola	5.44E-04
5	GO:0005758: mitochondrial intermembrane space	1.08E-03
6	GO:0005741: mitochondrial outer membrane	1.30E-03
7	GO:0048046: apoplast	1.88E-03
8	GO:0005773: vacuole	1.91E-03
9	GO:0016021: integral component of membrane	1.94E-03
10	GO:0005746: mitochondrial respiratory chain	2.15E-03
11	GO:0016020: membrane	3.70E-03
12	GO:0019773: proteasome core complex, alpha-subunit complex	4.98E-03
13	GO:0043231: intracellular membrane-bounded organelle	5.30E-03
14	GO:0005829: cytosol	5.50E-03
15	GO:0000325: plant-type vacuole	5.67E-03
16	GO:0031225: anchored component of membrane	6.21E-03
17	GO:0005887: integral component of plasma membrane	7.27E-03
18	GO:0031201: SNARE complex	7.39E-03
19	GO:0031012: extracellular matrix	9.38E-03
20	GO:0005783: endoplasmic reticulum	9.85E-03
21	GO:0030176: integral component of endoplasmic reticulum membrane	1.11E-02
22	GO:0005839: proteasome core complex	1.47E-02
23	GO:0005618: cell wall	1.65E-02
24	GO:0015629: actin cytoskeleton	1.67E-02
25	GO:0005802: trans-Golgi network	2.21E-02
26	GO:0009504: cell plate	2.32E-02
27	GO:0009507: chloroplast	2.63E-02
28	GO:0046658: anchored component of plasma membrane	3.54E-02
29	GO:0005643: nuclear pore	3.82E-02
30	GO:0009536: plastid	4.20E-02
31	GO:0009506: plasmodesma	4.51E-02