GO Enrichment Analysis of Co-expressed Genes with
AT4G02230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0071433: cell wall repair | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.17E-07 |
| 6 | GO:0000470: maturation of LSU-rRNA | 5.63E-06 |
| 7 | GO:0055081: anion homeostasis | 4.31E-05 |
| 8 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 4.31E-05 |
| 9 | GO:0000494: box C/D snoRNA 3'-end processing | 4.31E-05 |
| 10 | GO:2000232: regulation of rRNA processing | 4.31E-05 |
| 11 | GO:1990258: histone glutamine methylation | 4.31E-05 |
| 12 | GO:0006364: rRNA processing | 7.15E-05 |
| 13 | GO:0010220: positive regulation of vernalization response | 1.07E-04 |
| 14 | GO:0006412: translation | 1.37E-04 |
| 15 | GO:0070475: rRNA base methylation | 1.84E-04 |
| 16 | GO:0000460: maturation of 5.8S rRNA | 3.64E-04 |
| 17 | GO:0042274: ribosomal small subunit biogenesis | 3.64E-04 |
| 18 | GO:0031167: rRNA methylation | 4.63E-04 |
| 19 | GO:0042254: ribosome biogenesis | 4.66E-04 |
| 20 | GO:0009407: toxin catabolic process | 5.47E-04 |
| 21 | GO:0009636: response to toxic substance | 8.91E-04 |
| 22 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.08E-04 |
| 23 | GO:0042255: ribosome assembly | 9.08E-04 |
| 24 | GO:0006526: arginine biosynthetic process | 1.03E-03 |
| 25 | GO:0001510: RNA methylation | 1.03E-03 |
| 26 | GO:0043069: negative regulation of programmed cell death | 1.43E-03 |
| 27 | GO:0010162: seed dormancy process | 1.43E-03 |
| 28 | GO:0006541: glutamine metabolic process | 2.03E-03 |
| 29 | GO:0070588: calcium ion transmembrane transport | 2.19E-03 |
| 30 | GO:0000162: tryptophan biosynthetic process | 2.36E-03 |
| 31 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.52E-03 |
| 32 | GO:0080147: root hair cell development | 2.52E-03 |
| 33 | GO:0000027: ribosomal large subunit assembly | 2.52E-03 |
| 34 | GO:0030150: protein import into mitochondrial matrix | 2.52E-03 |
| 35 | GO:0006334: nucleosome assembly | 2.88E-03 |
| 36 | GO:0009294: DNA mediated transformation | 3.24E-03 |
| 37 | GO:0040007: growth | 3.24E-03 |
| 38 | GO:0008033: tRNA processing | 3.82E-03 |
| 39 | GO:0000413: protein peptidyl-prolyl isomerization | 3.82E-03 |
| 40 | GO:0010286: heat acclimation | 5.52E-03 |
| 41 | GO:0032259: methylation | 6.78E-03 |
| 42 | GO:0010043: response to zinc ion | 7.95E-03 |
| 43 | GO:0046686: response to cadmium ion | 8.41E-03 |
| 44 | GO:0006099: tricarboxylic acid cycle | 8.74E-03 |
| 45 | GO:0000154: rRNA modification | 1.10E-02 |
| 46 | GO:0009909: regulation of flower development | 1.34E-02 |
| 47 | GO:0016569: covalent chromatin modification | 1.54E-02 |
| 48 | GO:0006457: protein folding | 1.63E-02 |
| 49 | GO:0006396: RNA processing | 1.64E-02 |
| 50 | GO:0006414: translational elongation | 1.88E-02 |
| 51 | GO:0006413: translational initiation | 2.25E-02 |
| 52 | GO:0042742: defense response to bacterium | 2.56E-02 |
| 53 | GO:0006470: protein dephosphorylation | 2.60E-02 |
| 54 | GO:0009617: response to bacterium | 2.68E-02 |
| 55 | GO:0080167: response to karrikin | 3.76E-02 |
| 56 | GO:0009408: response to heat | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0003735: structural constituent of ribosome | 8.47E-06 |
| 3 | GO:0030515: snoRNA binding | 1.13E-05 |
| 4 | GO:0009383: rRNA (cytosine-C5-)-methyltransferase activity | 4.31E-05 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 4.31E-05 |
| 6 | GO:0004042: acetyl-CoA:L-glutamate N-acetyltransferase activity | 1.07E-04 |
| 7 | GO:0043021: ribonucleoprotein complex binding | 1.07E-04 |
| 8 | GO:0000774: adenyl-nucleotide exchange factor activity | 1.07E-04 |
| 9 | GO:0008649: rRNA methyltransferase activity | 1.84E-04 |
| 10 | GO:0004049: anthranilate synthase activity | 1.84E-04 |
| 11 | GO:0008469: histone-arginine N-methyltransferase activity | 1.84E-04 |
| 12 | GO:0004527: exonuclease activity | 2.12E-04 |
| 13 | GO:0008276: protein methyltransferase activity | 2.70E-04 |
| 14 | GO:0003746: translation elongation factor activity | 6.25E-04 |
| 15 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.76E-04 |
| 16 | GO:0004364: glutathione transferase activity | 7.67E-04 |
| 17 | GO:0043295: glutathione binding | 7.90E-04 |
| 18 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.22E-04 |
| 19 | GO:0003723: RNA binding | 1.44E-03 |
| 20 | GO:0004129: cytochrome-c oxidase activity | 1.57E-03 |
| 21 | GO:0005388: calcium-transporting ATPase activity | 1.87E-03 |
| 22 | GO:0000175: 3'-5'-exoribonuclease activity | 1.87E-03 |
| 23 | GO:0000166: nucleotide binding | 1.97E-03 |
| 24 | GO:0004407: histone deacetylase activity | 2.52E-03 |
| 25 | GO:0005528: FK506 binding | 2.52E-03 |
| 26 | GO:0051087: chaperone binding | 2.70E-03 |
| 27 | GO:0008168: methyltransferase activity | 3.74E-03 |
| 28 | GO:0003713: transcription coactivator activity | 4.02E-03 |
| 29 | GO:0010181: FMN binding | 4.23E-03 |
| 30 | GO:0003729: mRNA binding | 7.94E-03 |
| 31 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.47E-03 |
| 32 | GO:0042393: histone binding | 9.28E-03 |
| 33 | GO:0051082: unfolded protein binding | 1.60E-02 |
| 34 | GO:0005507: copper ion binding | 1.80E-02 |
| 35 | GO:0003743: translation initiation factor activity | 2.64E-02 |
| 36 | GO:0016491: oxidoreductase activity | 3.36E-02 |
| 37 | GO:0042803: protein homodimerization activity | 4.41E-02 |
| 38 | GO:0004722: protein serine/threonine phosphatase activity | 4.56E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005730: nucleolus | 1.79E-12 |
| 2 | GO:0070545: PeBoW complex | 1.17E-07 |
| 3 | GO:0005840: ribosome | 1.02E-06 |
| 4 | GO:0031428: box C/D snoRNP complex | 5.63E-06 |
| 5 | GO:0032783: ELL-EAF complex | 4.31E-05 |
| 6 | GO:0001405: presequence translocase-associated import motor | 4.31E-05 |
| 7 | GO:0005829: cytosol | 4.75E-05 |
| 8 | GO:0032040: small-subunit processome | 5.14E-05 |
| 9 | GO:0005901: caveola | 1.07E-04 |
| 10 | GO:0022626: cytosolic ribosome | 2.72E-04 |
| 11 | GO:0022627: cytosolic small ribosomal subunit | 3.73E-04 |
| 12 | GO:0005746: mitochondrial respiratory chain | 4.63E-04 |
| 13 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.11E-04 |
| 14 | GO:0015934: large ribosomal subunit | 5.72E-04 |
| 15 | GO:0030687: preribosome, large subunit precursor | 7.90E-04 |
| 16 | GO:0045273: respiratory chain complex II | 9.08E-04 |
| 17 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 9.08E-04 |
| 18 | GO:0015030: Cajal body | 1.29E-03 |
| 19 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.57E-03 |
| 20 | GO:0005654: nucleoplasm | 1.79E-03 |
| 21 | GO:0016592: mediator complex | 4.86E-03 |
| 22 | GO:0022625: cytosolic large ribosomal subunit | 5.05E-03 |
| 23 | GO:0005737: cytoplasm | 5.78E-03 |
| 24 | GO:0005773: vacuole | 1.07E-02 |
| 25 | GO:0009506: plasmodesma | 1.35E-02 |
| 26 | GO:0005834: heterotrimeric G-protein complex | 1.47E-02 |
| 27 | GO:0005759: mitochondrial matrix | 2.21E-02 |
| 28 | GO:0005622: intracellular | 2.24E-02 |
| 29 | GO:0009705: plant-type vacuole membrane | 2.36E-02 |