co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G02130

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033494: ferulate metabolic process	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0005996: monosaccharide metabolic process	0.00E+00
4	GO:0007638: mechanosensory behavior	0.00E+00
5	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
6	GO:0042335: cuticle development	1.38E-05
7	GO:0006810: transport	1.71E-05
8	GO:0015976: carbon utilization	5.52E-05
9	GO:0010411: xyloglucan metabolic process	7.13E-05
10	GO:0010190: cytochrome b6f complex assembly	1.27E-04
11	GO:0042546: cell wall biogenesis	2.21E-04
12	GO:0016117: carotenoid biosynthetic process	2.22E-04
13	GO:0009645: response to low light intensity stimulus	2.27E-04
14	GO:0042547: cell wall modification involved in multidimensional cell growth	2.89E-04
15	GO:0042371: vitamin K biosynthetic process	2.89E-04
16	GO:0010442: guard cell morphogenesis	2.89E-04
17	GO:0032544: plastid translation	3.53E-04
18	GO:0010583: response to cyclopentenone	3.96E-04
19	GO:0009658: chloroplast organization	5.47E-04
20	GO:0030388: fructose 1,6-bisphosphate metabolic process	6.34E-04
21	GO:2000123: positive regulation of stomatal complex development	6.34E-04
22	GO:0010270: photosystem II oxygen evolving complex assembly	6.34E-04
23	GO:0052541: plant-type cell wall cellulose metabolic process	6.34E-04
24	GO:0006695: cholesterol biosynthetic process	6.34E-04
25	GO:0006650: glycerophospholipid metabolic process	6.34E-04
26	GO:0000038: very long-chain fatty acid metabolic process	6.77E-04
27	GO:0006816: calcium ion transport	6.77E-04
28	GO:0009773: photosynthetic electron transport in photosystem I	6.77E-04
29	GO:0006415: translational termination	6.77E-04
30	GO:0010020: chloroplast fission	9.86E-04
31	GO:0015979: photosynthesis	1.01E-03
32	GO:0006696: ergosterol biosynthetic process	1.03E-03
33	GO:0006000: fructose metabolic process	1.03E-03
34	GO:0010581: regulation of starch biosynthetic process	1.03E-03
35	GO:0006633: fatty acid biosynthetic process	1.16E-03
36	GO:0006833: water transport	1.22E-03
37	GO:0019344: cysteine biosynthetic process	1.35E-03
38	GO:0071555: cell wall organization	1.42E-03
39	GO:0043572: plastid fission	1.47E-03
40	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.47E-03
41	GO:0007231: osmosensory signaling pathway	1.47E-03
42	GO:0009855: determination of bilateral symmetry	1.47E-03
43	GO:0009768: photosynthesis, light harvesting in photosystem I	1.49E-03
44	GO:0010037: response to carbon dioxide	1.97E-03
45	GO:0009765: photosynthesis, light harvesting	1.97E-03
46	GO:0006085: acetyl-CoA biosynthetic process	1.97E-03
47	GO:0045727: positive regulation of translation	1.97E-03
48	GO:2000122: negative regulation of stomatal complex development	1.97E-03
49	GO:0033500: carbohydrate homeostasis	1.97E-03
50	GO:0031122: cytoplasmic microtubule organization	1.97E-03
51	GO:2000038: regulation of stomatal complex development	1.97E-03
52	GO:0006546: glycine catabolic process	1.97E-03
53	GO:0042991: transcription factor import into nucleus	1.97E-03
54	GO:0034220: ion transmembrane transport	2.48E-03
55	GO:0000413: protein peptidyl-prolyl isomerization	2.48E-03
56	GO:0016123: xanthophyll biosynthetic process	2.52E-03
57	GO:0010375: stomatal complex patterning	2.52E-03
58	GO:0016120: carotene biosynthetic process	2.52E-03
59	GO:0010358: leaf shaping	3.11E-03
60	GO:0016554: cytidine to uridine editing	3.11E-03
61	GO:0006828: manganese ion transport	3.11E-03
62	GO:0071554: cell wall organization or biogenesis	3.30E-03
63	GO:0009854: oxidative photosynthetic carbon pathway	3.74E-03
64	GO:0010555: response to mannitol	3.74E-03
65	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.74E-03
66	GO:0009955: adaxial/abaxial pattern specification	3.74E-03
67	GO:0080060: integument development	3.74E-03
68	GO:0010014: meristem initiation	3.74E-03
69	GO:0042372: phylloquinone biosynthetic process	3.74E-03
70	GO:0009612: response to mechanical stimulus	3.74E-03
71	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.82E-03
72	GO:0007267: cell-cell signaling	4.24E-03
73	GO:0007155: cell adhesion	5.12E-03
74	GO:0009642: response to light intensity	5.12E-03
75	GO:0009690: cytokinin metabolic process	5.12E-03
76	GO:0009932: cell tip growth	5.87E-03
77	GO:0006002: fructose 6-phosphate metabolic process	5.87E-03
78	GO:0019430: removal of superoxide radicals	5.87E-03
79	GO:0009657: plastid organization	5.87E-03
80	GO:0018298: protein-chromophore linkage	6.21E-03
81	GO:0006754: ATP biosynthetic process	6.65E-03
82	GO:0045337: farnesyl diphosphate biosynthetic process	6.65E-03
83	GO:0033384: geranyl diphosphate biosynthetic process	6.65E-03
84	GO:0045490: pectin catabolic process	6.93E-03
85	GO:0007623: circadian rhythm	6.93E-03
86	GO:0016573: histone acetylation	7.48E-03
87	GO:0042761: very long-chain fatty acid biosynthetic process	7.48E-03
88	GO:1900865: chloroplast RNA modification	7.48E-03
89	GO:0010380: regulation of chlorophyll biosynthetic process	7.48E-03
90	GO:0016051: carbohydrate biosynthetic process	7.88E-03
91	GO:0043069: negative regulation of programmed cell death	8.33E-03
92	GO:0019538: protein metabolic process	8.33E-03
93	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.33E-03
94	GO:0006535: cysteine biosynthetic process from serine	8.33E-03
95	GO:0018119: peptidyl-cysteine S-nitrosylation	9.22E-03
96	GO:0019684: photosynthesis, light reaction	9.22E-03
97	GO:0010072: primary shoot apical meristem specification	9.22E-03
98	GO:0009089: lysine biosynthetic process via diaminopimelate	9.22E-03
99	GO:0043085: positive regulation of catalytic activity	9.22E-03
100	GO:0000272: polysaccharide catabolic process	9.22E-03
101	GO:0006631: fatty acid metabolic process	9.37E-03
102	GO:0006790: sulfur compound metabolic process	1.01E-02
103	GO:0050826: response to freezing	1.11E-02
104	GO:0009725: response to hormone	1.11E-02
105	GO:0006094: gluconeogenesis	1.11E-02
106	GO:0009767: photosynthetic electron transport chain	1.11E-02
107	GO:0005986: sucrose biosynthetic process	1.11E-02
108	GO:0010143: cutin biosynthetic process	1.21E-02
109	GO:0019253: reductive pentose-phosphate cycle	1.21E-02
110	GO:0070588: calcium ion transmembrane transport	1.31E-02
111	GO:0046854: phosphatidylinositol phosphorylation	1.31E-02
112	GO:0009969: xyloglucan biosynthetic process	1.31E-02
113	GO:0010167: response to nitrate	1.31E-02
114	GO:0006071: glycerol metabolic process	1.41E-02
115	GO:0010025: wax biosynthetic process	1.41E-02
116	GO:0006636: unsaturated fatty acid biosynthetic process	1.41E-02
117	GO:0042742: defense response to bacterium	1.48E-02
118	GO:0009944: polarity specification of adaxial/abaxial axis	1.52E-02
119	GO:0006338: chromatin remodeling	1.52E-02
120	GO:0006418: tRNA aminoacylation for protein translation	1.63E-02
121	GO:0010026: trichome differentiation	1.63E-02
122	GO:0007017: microtubule-based process	1.63E-02
123	GO:0061077: chaperone-mediated protein folding	1.75E-02
124	GO:0080092: regulation of pollen tube growth	1.86E-02
125	GO:0019748: secondary metabolic process	1.86E-02
126	GO:0009814: defense response, incompatible interaction	1.86E-02
127	GO:0009294: DNA mediated transformation	1.98E-02
128	GO:0045454: cell redox homeostasis	2.00E-02
129	GO:0006284: base-excision repair	2.10E-02
130	GO:0019722: calcium-mediated signaling	2.10E-02
131	GO:0042631: cellular response to water deprivation	2.35E-02
132	GO:0000271: polysaccharide biosynthetic process	2.35E-02
133	GO:0009409: response to cold	2.48E-02
134	GO:0009741: response to brassinosteroid	2.48E-02
135	GO:0010268: brassinosteroid homeostasis	2.48E-02
136	GO:0045489: pectin biosynthetic process	2.48E-02
137	GO:0019252: starch biosynthetic process	2.75E-02
138	GO:0008654: phospholipid biosynthetic process	2.75E-02
139	GO:0048825: cotyledon development	2.75E-02
140	GO:0016132: brassinosteroid biosynthetic process	2.88E-02
141	GO:0005975: carbohydrate metabolic process	3.00E-02
142	GO:0055114: oxidation-reduction process	3.00E-02
143	GO:0032502: developmental process	3.02E-02
144	GO:1901657: glycosyl compound metabolic process	3.16E-02
145	GO:0016125: sterol metabolic process	3.31E-02
146	GO:0016126: sterol biosynthetic process	3.75E-02
147	GO:0010027: thylakoid membrane organization	3.75E-02
148	GO:0007166: cell surface receptor signaling pathway	3.87E-02
149	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.90E-02
150	GO:0009627: systemic acquired resistance	4.05E-02
151	GO:0042128: nitrate assimilation	4.05E-02
152	GO:0009817: defense response to fungus, incompatible interaction	4.53E-02
153	GO:0048481: plant ovule development	4.53E-02
154	GO:0010218: response to far red light	4.85E-02
155	GO:0009407: toxin catabolic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
4	GO:0047889: ferredoxin-nitrate reductase activity	0.00E+00
5	GO:0009974: zeinoxanthin epsilon hydroxylase activity	0.00E+00
6	GO:0008887: glycerate kinase activity	0.00E+00
7	GO:0048307: ferredoxin-nitrite reductase activity	0.00E+00
8	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
9	GO:0050613: delta14-sterol reductase activity	0.00E+00
10	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
11	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
12	GO:0046905: phytoene synthase activity	0.00E+00
13	GO:0050421: nitrite reductase (NO-forming) activity	0.00E+00
14	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.50E-05
15	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.54E-05
16	GO:0016149: translation release factor activity, codon specific	3.07E-05
17	GO:0016798: hydrolase activity, acting on glycosyl bonds	7.13E-05
18	GO:0005528: FK506 binding	1.02E-04
19	GO:0051920: peroxiredoxin activity	1.74E-04
20	GO:0016209: antioxidant activity	2.87E-04
21	GO:0010012: steroid 22-alpha hydroxylase activity	2.89E-04
22	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	2.89E-04
23	GO:0080132: fatty acid alpha-hydroxylase activity	2.89E-04
24	GO:0008568: microtubule-severing ATPase activity	2.89E-04
25	GO:0051996: squalene synthase activity	2.89E-04
26	GO:0003747: translation release factor activity	4.25E-04
27	GO:0016722: oxidoreductase activity, oxidizing metal ions	5.05E-04
28	GO:0050017: L-3-cyanoalanine synthase activity	6.34E-04
29	GO:0042389: omega-3 fatty acid desaturase activity	6.34E-04
30	GO:0010297: heteropolysaccharide binding	6.34E-04
31	GO:0004047: aminomethyltransferase activity	6.34E-04
32	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	6.34E-04
33	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	6.34E-04
34	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	6.34E-04
35	GO:0004089: carbonate dehydratase activity	8.76E-04
36	GO:0030267: glyoxylate reductase (NADP) activity	1.03E-03
37	GO:0070330: aromatase activity	1.03E-03
38	GO:0050734: hydroxycinnamoyltransferase activity	1.03E-03
39	GO:0002161: aminoacyl-tRNA editing activity	1.03E-03
40	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.22E-03
41	GO:0031409: pigment binding	1.22E-03
42	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.22E-03
43	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.22E-03
44	GO:0003878: ATP citrate synthase activity	1.47E-03
45	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.47E-03
46	GO:0030570: pectate lyase activity	1.95E-03
47	GO:0004659: prenyltransferase activity	1.97E-03
48	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.97E-03
49	GO:0004045: aminoacyl-tRNA hydrolase activity	1.97E-03
50	GO:0008725: DNA-3-methyladenine glycosylase activity	2.52E-03
51	GO:0008374: O-acyltransferase activity	2.52E-03
52	GO:0018685: alkane 1-monooxygenase activity	2.52E-03
53	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.84E-03
54	GO:0019901: protein kinase binding	3.08E-03
55	GO:0016208: AMP binding	3.11E-03
56	GO:0042578: phosphoric ester hydrolase activity	3.11E-03
57	GO:0004124: cysteine synthase activity	3.74E-03
58	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	3.74E-03
59	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.74E-03
60	GO:0051753: mannan synthase activity	3.74E-03
61	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	3.74E-03
62	GO:0016413: O-acetyltransferase activity	4.50E-03
63	GO:0015250: water channel activity	4.76E-03
64	GO:0016168: chlorophyll binding	5.03E-03
65	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	5.87E-03
66	GO:0016740: transferase activity	6.14E-03
67	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	6.65E-03
68	GO:0004337: geranyltranstransferase activity	6.65E-03
69	GO:0008889: glycerophosphodiester phosphodiesterase activity	6.65E-03
70	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	7.05E-03
71	GO:0005384: manganese ion transmembrane transporter activity	7.48E-03
72	GO:0008047: enzyme activator activity	8.33E-03
73	GO:0004161: dimethylallyltranstransferase activity	9.22E-03
74	GO:0005089: Rho guanyl-nucleotide exchange factor activity	9.22E-03
75	GO:0008378: galactosyltransferase activity	1.01E-02
76	GO:0000049: tRNA binding	1.01E-02
77	GO:0004185: serine-type carboxypeptidase activity	1.02E-02
78	GO:0015095: magnesium ion transmembrane transporter activity	1.11E-02
79	GO:0031072: heat shock protein binding	1.11E-02
80	GO:0005262: calcium channel activity	1.11E-02
81	GO:0004565: beta-galactosidase activity	1.11E-02
82	GO:0016887: ATPase activity	1.27E-02
83	GO:0004857: enzyme inhibitor activity	1.52E-02
84	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.75E-02
85	GO:0004176: ATP-dependent peptidase activity	1.75E-02
86	GO:0004650: polygalacturonase activity	1.79E-02
87	GO:0030599: pectinesterase activity	1.85E-02
88	GO:0022857: transmembrane transporter activity	1.85E-02
89	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.86E-02
90	GO:0016746: transferase activity, transferring acyl groups	2.02E-02
91	GO:0008514: organic anion transmembrane transporter activity	2.10E-02
92	GO:0003756: protein disulfide isomerase activity	2.10E-02
93	GO:0004812: aminoacyl-tRNA ligase activity	2.23E-02
94	GO:0001085: RNA polymerase II transcription factor binding	2.48E-02
95	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.53E-02
96	GO:0004791: thioredoxin-disulfide reductase activity	2.61E-02
97	GO:0050662: coenzyme binding	2.61E-02
98	GO:0005507: copper ion binding	2.64E-02
99	GO:0016829: lyase activity	2.66E-02
100	GO:0004872: receptor activity	2.75E-02
101	GO:0009055: electron carrier activity	2.83E-02
102	GO:0046872: metal ion binding	2.85E-02
103	GO:0048038: quinone binding	2.88E-02
104	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.16E-02
105	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.16E-02
106	GO:0008483: transaminase activity	3.45E-02
107	GO:0008237: metallopeptidase activity	3.45E-02
108	GO:0005200: structural constituent of cytoskeleton	3.45E-02
109	GO:0008289: lipid binding	3.91E-02
110	GO:0005509: calcium ion binding	3.93E-02
111	GO:0102483: scopolin beta-glucosidase activity	4.21E-02
112	GO:0042802: identical protein binding	4.30E-02
113	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.37E-02
114	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.85E-02
115	GO:0004222: metalloendopeptidase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0031224: intrinsic component of membrane	0.00E+00
2	GO:0009535: chloroplast thylakoid membrane	1.98E-13
3	GO:0009507: chloroplast	1.04E-12
4	GO:0048046: apoplast	2.00E-12
5	GO:0009543: chloroplast thylakoid lumen	8.13E-11
6	GO:0009941: chloroplast envelope	1.69E-10
7	GO:0046658: anchored component of plasma membrane	3.08E-08
8	GO:0031225: anchored component of membrane	9.79E-08
9	GO:0009570: chloroplast stroma	1.06E-07
10	GO:0009654: photosystem II oxygen evolving complex	4.42E-06
11	GO:0031977: thylakoid lumen	1.43E-05
12	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.45E-05
13	GO:0019898: extrinsic component of membrane	2.18E-05
14	GO:0009505: plant-type cell wall	4.73E-05
15	GO:0030095: chloroplast photosystem II	6.11E-05
16	GO:0009579: thylakoid	9.92E-05
17	GO:0009534: chloroplast thylakoid	1.02E-04
18	GO:0010287: plastoglobule	1.13E-04
19	GO:0005618: cell wall	2.12E-04
20	GO:0009344: nitrite reductase complex [NAD(P)H]	2.89E-04
21	GO:0009782: photosystem I antenna complex	2.89E-04
22	GO:0005576: extracellular region	3.65E-04
23	GO:0000427: plastid-encoded plastid RNA polymerase complex	6.34E-04
24	GO:0042170: plastid membrane	6.34E-04
25	GO:0030076: light-harvesting complex	1.10E-03
26	GO:0005886: plasma membrane	1.29E-03
27	GO:0009346: citrate lyase complex	1.47E-03
28	GO:0009706: chloroplast inner membrane	3.45E-03
29	GO:0031969: chloroplast membrane	3.63E-03
30	GO:0010319: stromule	4.24E-03
31	GO:0009533: chloroplast stromal thylakoid	4.41E-03
32	GO:0000123: histone acetyltransferase complex	4.41E-03
33	GO:0016020: membrane	5.39E-03
34	GO:0045298: tubulin complex	6.65E-03
35	GO:0016021: integral component of membrane	6.85E-03
36	GO:0016324: apical plasma membrane	8.33E-03
37	GO:0009508: plastid chromosome	1.11E-02
38	GO:0030659: cytoplasmic vesicle membrane	1.21E-02
39	GO:0030176: integral component of endoplasmic reticulum membrane	1.31E-02
40	GO:0005875: microtubule associated complex	1.41E-02
41	GO:0042651: thylakoid membrane	1.63E-02
42	GO:0009532: plastid stroma	1.75E-02
43	GO:0009506: plasmodesma	1.97E-02
44	GO:0009522: photosystem I	2.61E-02
45	GO:0005778: peroxisomal membrane	3.45E-02
46	GO:0009295: nucleoid	3.45E-02
47	GO:0030529: intracellular ribonucleoprotein complex	3.75E-02
48	GO:0005887: integral component of plasma membrane	3.79E-02
49	GO:0005667: transcription factor complex	4.05E-02
50	GO:0005773: vacuole	4.85E-02