co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G01950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0010423: negative regulation of brassinosteroid biosynthetic process	0.00E+00
3	GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)	0.00E+00
4	GO:0071555: cell wall organization	7.89E-07
5	GO:0080167: response to karrikin	8.76E-06
6	GO:0010200: response to chitin	9.76E-06
7	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.29E-04
8	GO:0000271: polysaccharide biosynthetic process	1.68E-04
9	GO:0045489: pectin biosynthetic process	1.87E-04
10	GO:0009751: response to salicylic acid	1.93E-04
11	GO:0048438: floral whorl development	2.39E-04
12	GO:0000066: mitochondrial ornithine transport	2.39E-04
13	GO:0050691: regulation of defense response to virus by host	2.39E-04
14	GO:0071370: cellular response to gibberellin stimulus	2.39E-04
15	GO:0033481: galacturonate biosynthetic process	2.39E-04
16	GO:0030154: cell differentiation	2.51E-04
17	GO:0010583: response to cyclopentenone	2.75E-04
18	GO:0051555: flavonol biosynthetic process	4.48E-04
19	GO:0010411: xyloglucan metabolic process	5.07E-04
20	GO:1900386: positive regulation of flavonol biosynthetic process	5.29E-04
21	GO:0007154: cell communication	5.29E-04
22	GO:0071497: cellular response to freezing	5.29E-04
23	GO:0010220: positive regulation of vernalization response	5.29E-04
24	GO:0030036: actin cytoskeleton organization	6.71E-04
25	GO:0010167: response to nitrate	8.45E-04
26	GO:0019419: sulfate reduction	8.60E-04
27	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	8.60E-04
28	GO:0042546: cell wall biogenesis	1.12E-03
29	GO:1902358: sulfate transmembrane transport	1.23E-03
30	GO:0051016: barbed-end actin filament capping	1.23E-03
31	GO:0031347: regulation of defense response	1.35E-03
32	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.36E-03
33	GO:0009411: response to UV	1.48E-03
34	GO:0006357: regulation of transcription from RNA polymerase II promoter	1.58E-03
35	GO:0046345: abscisic acid catabolic process	1.64E-03
36	GO:0009765: photosynthesis, light harvesting	1.64E-03
37	GO:0009741: response to brassinosteroid	2.03E-03
38	GO:2000762: regulation of phenylpropanoid metabolic process	2.09E-03
39	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.50E-03
40	GO:0000060: protein import into nucleus, translocation	2.57E-03
41	GO:0009635: response to herbicide	2.57E-03
42	GO:0010555: response to mannitol	3.09E-03
43	GO:0010077: maintenance of inflorescence meristem identity	3.09E-03
44	GO:2000067: regulation of root morphogenesis	3.09E-03
45	GO:0010076: maintenance of floral meristem identity	3.09E-03
46	GO:0017148: negative regulation of translation	3.09E-03
47	GO:0009554: megasporogenesis	3.09E-03
48	GO:0050829: defense response to Gram-negative bacterium	3.64E-03
49	GO:0006400: tRNA modification	3.64E-03
50	GO:0051510: regulation of unidimensional cell growth	3.64E-03
51	GO:0052543: callose deposition in cell wall	4.23E-03
52	GO:0030162: regulation of proteolysis	4.23E-03
53	GO:0045010: actin nucleation	4.23E-03
54	GO:0009753: response to jasmonic acid	4.76E-03
55	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.84E-03
56	GO:0022900: electron transport chain	4.84E-03
57	GO:0007186: G-protein coupled receptor signaling pathway	4.84E-03
58	GO:0009813: flavonoid biosynthetic process	4.94E-03
59	GO:0010218: response to far red light	5.18E-03
60	GO:0051865: protein autoubiquitination	5.48E-03
61	GO:0009739: response to gibberellin	5.60E-03
62	GO:0009637: response to blue light	5.96E-03
63	GO:0016051: carbohydrate biosynthetic process	5.96E-03
64	GO:0009638: phototropism	6.15E-03
65	GO:0010192: mucilage biosynthetic process	6.85E-03
66	GO:0009970: cellular response to sulfate starvation	6.85E-03
67	GO:0000103: sulfate assimilation	6.85E-03
68	GO:0043069: negative regulation of programmed cell death	6.85E-03
69	GO:0000038: very long-chain fatty acid metabolic process	7.58E-03
70	GO:0009698: phenylpropanoid metabolic process	7.58E-03
71	GO:1903507: negative regulation of nucleic acid-templated transcription	7.58E-03
72	GO:0000272: polysaccharide catabolic process	7.58E-03
73	GO:0009750: response to fructose	7.58E-03
74	GO:0010114: response to red light	7.68E-03
75	GO:0010582: floral meristem determinacy	8.33E-03
76	GO:0015706: nitrate transport	8.33E-03
77	GO:0016925: protein sumoylation	8.33E-03
78	GO:0018107: peptidyl-threonine phosphorylation	9.11E-03
79	GO:0034605: cellular response to heat	9.92E-03
80	GO:0002237: response to molecule of bacterial origin	9.92E-03
81	GO:0009723: response to ethylene	1.02E-02
82	GO:0009969: xyloglucan biosynthetic process	1.07E-02
83	GO:0009225: nucleotide-sugar metabolic process	1.07E-02
84	GO:0005985: sucrose metabolic process	1.07E-02
85	GO:0010224: response to UV-B	1.07E-02
86	GO:0009733: response to auxin	1.11E-02
87	GO:0019762: glucosinolate catabolic process	1.16E-02
88	GO:0009833: plant-type primary cell wall biogenesis	1.16E-02
89	GO:0005992: trehalose biosynthetic process	1.25E-02
90	GO:0019344: cysteine biosynthetic process	1.25E-02
91	GO:0009768: photosynthesis, light harvesting in photosystem I	1.34E-02
92	GO:0045454: cell redox homeostasis	1.40E-02
93	GO:0010017: red or far-red light signaling pathway	1.53E-02
94	GO:0051726: regulation of cell cycle	1.57E-02
95	GO:0009742: brassinosteroid mediated signaling pathway	1.57E-02
96	GO:0010584: pollen exine formation	1.72E-02
97	GO:0019722: calcium-mediated signaling	1.72E-02
98	GO:0015991: ATP hydrolysis coupled proton transport	1.93E-02
99	GO:0048653: anther development	1.93E-02
100	GO:0080022: primary root development	1.93E-02
101	GO:0010268: brassinosteroid homeostasis	2.03E-02
102	GO:0009958: positive gravitropism	2.03E-02
103	GO:0015986: ATP synthesis coupled proton transport	2.14E-02
104	GO:0009791: post-embryonic development	2.25E-02
105	GO:0009749: response to glucose	2.25E-02
106	GO:0016132: brassinosteroid biosynthetic process	2.36E-02
107	GO:0071554: cell wall organization or biogenesis	2.36E-02
108	GO:0002229: defense response to oomycetes	2.36E-02
109	GO:0040008: regulation of growth	2.45E-02
110	GO:1901657: glycosyl compound metabolic process	2.59E-02
111	GO:0006468: protein phosphorylation	2.64E-02
112	GO:0016125: sterol metabolic process	2.71E-02
113	GO:0019760: glucosinolate metabolic process	2.71E-02
114	GO:0009639: response to red or far red light	2.71E-02
115	GO:0009828: plant-type cell wall loosening	2.71E-02
116	GO:0009414: response to water deprivation	2.83E-02
117	GO:0007267: cell-cell signaling	2.83E-02
118	GO:0009911: positive regulation of flower development	3.07E-02
119	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.19E-02
120	GO:0042128: nitrate assimilation	3.32E-02
121	GO:0048573: photoperiodism, flowering	3.45E-02
122	GO:0009738: abscisic acid-activated signaling pathway	3.58E-02
123	GO:0030244: cellulose biosynthetic process	3.71E-02
124	GO:0018298: protein-chromophore linkage	3.71E-02
125	GO:0009826: unidimensional cell growth	3.81E-02
126	GO:0048767: root hair elongation	3.84E-02
127	GO:0009832: plant-type cell wall biogenesis	3.84E-02
128	GO:0007568: aging	4.11E-02
129	GO:0048527: lateral root development	4.11E-02
130	GO:0010119: regulation of stomatal movement	4.11E-02
131	GO:0007049: cell cycle	4.41E-02
132	GO:0045893: positive regulation of transcription, DNA-templated	4.42E-02
133	GO:0006839: mitochondrial transport	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
2	GO:0016759: cellulose synthase activity	2.13E-05
3	GO:0045430: chalcone isomerase activity	3.99E-05
4	GO:0016757: transferase activity, transferring glycosyl groups	1.49E-04
5	GO:0044212: transcription regulatory region DNA binding	1.99E-04
6	GO:0080132: fatty acid alpha-hydroxylase activity	2.39E-04
7	GO:0010313: phytochrome binding	2.39E-04
8	GO:0033741: adenylyl-sulfate reductase (glutathione) activity	5.29E-04
9	GO:0000064: L-ornithine transmembrane transporter activity	5.29E-04
10	GO:0048531: beta-1,3-galactosyltransferase activity	5.29E-04
11	GO:0009973: adenylyl-sulfate reductase activity	5.29E-04
12	GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity	5.29E-04
13	GO:0080109: indole-3-acetonitrile nitrile hydratase activity	5.29E-04
14	GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting	6.71E-04
15	GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding	8.11E-04
16	GO:0001664: G-protein coupled receptor binding	8.60E-04
17	GO:0031683: G-protein beta/gamma-subunit complex binding	8.60E-04
18	GO:0010295: (+)-abscisic acid 8'-hydroxylase activity	8.60E-04
19	GO:0080061: indole-3-acetonitrile nitrilase activity	8.60E-04
20	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.15E-03
21	GO:0001872: (1->3)-beta-D-glucan binding	1.23E-03
22	GO:0000257: nitrilase activity	1.23E-03
23	GO:0033843: xyloglucan 6-xylosyltransferase activity	1.23E-03
24	GO:0048027: mRNA 5'-UTR binding	1.23E-03
25	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.36E-03
26	GO:0043565: sequence-specific DNA binding	1.52E-03
27	GO:0080032: methyl jasmonate esterase activity	1.64E-03
28	GO:0098599: palmitoyl hydrolase activity	1.64E-03
29	GO:0046527: glucosyltransferase activity	1.64E-03
30	GO:0050378: UDP-glucuronate 4-epimerase activity	1.64E-03
31	GO:0046982: protein heterodimerization activity	1.66E-03
32	GO:0031386: protein tag	2.09E-03
33	GO:0019901: protein kinase binding	2.34E-03
34	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.50E-03
35	GO:0080030: methyl indole-3-acetate esterase activity	2.57E-03
36	GO:0008474: palmitoyl-(protein) hydrolase activity	2.57E-03
37	GO:0008429: phosphatidylethanolamine binding	2.57E-03
38	GO:0035252: UDP-xylosyltransferase activity	2.57E-03
39	GO:0016161: beta-amylase activity	3.09E-03
40	GO:0016758: transferase activity, transferring hexosyl groups	3.11E-03
41	GO:0016621: cinnamoyl-CoA reductase activity	3.64E-03
42	GO:0004564: beta-fructofuranosidase activity	4.23E-03
43	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.25E-03
44	GO:0030247: polysaccharide binding	4.25E-03
45	GO:0008271: secondary active sulfate transmembrane transporter activity	4.84E-03
46	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	5.18E-03
47	GO:0016207: 4-coumarate-CoA ligase activity	5.48E-03
48	GO:0015112: nitrate transmembrane transporter activity	6.15E-03
49	GO:0004575: sucrose alpha-glucosidase activity	6.15E-03
50	GO:0004805: trehalose-phosphatase activity	6.85E-03
51	GO:0004860: protein kinase inhibitor activity	7.58E-03
52	GO:0046961: proton-transporting ATPase activity, rotational mechanism	7.58E-03
53	GO:0015116: sulfate transmembrane transporter activity	8.33E-03
54	GO:0015293: symporter activity	8.64E-03
55	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.92E-03
56	GO:0003712: transcription cofactor activity	1.07E-02
57	GO:0031409: pigment binding	1.16E-02
58	GO:0003714: transcription corepressor activity	1.25E-02
59	GO:0016760: cellulose synthase (UDP-forming) activity	1.62E-02
60	GO:0004402: histone acetyltransferase activity	1.93E-02
61	GO:0009055: electron carrier activity	1.99E-02
62	GO:0001085: RNA polymerase II transcription factor binding	2.03E-02
63	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.11E-02
64	GO:0004674: protein serine/threonine kinase activity	2.37E-02
65	GO:0004518: nuclease activity	2.47E-02
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.59E-02
67	GO:0051015: actin filament binding	2.59E-02
68	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.83E-02
69	GO:0005200: structural constituent of cytoskeleton	2.83E-02
70	GO:0016413: O-acetyltransferase activity	2.95E-02
71	GO:0016168: chlorophyll binding	3.19E-02
72	GO:0003824: catalytic activity	3.36E-02
73	GO:0102483: scopolin beta-glucosidase activity	3.45E-02
74	GO:0003700: transcription factor activity, sequence-specific DNA binding	4.02E-02
75	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.11E-02
76	GO:0008422: beta-glucosidase activity	4.67E-02
77	GO:0016740: transferase activity	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	2.08E-08
2	GO:0009505: plant-type cell wall	1.58E-05
3	GO:0046658: anchored component of plasma membrane	3.06E-05
4	GO:0005794: Golgi apparatus	5.17E-05
5	GO:0000139: Golgi membrane	4.40E-04
6	GO:0005886: plasma membrane	5.26E-04
7	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	5.29E-04
8	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.60E-04
9	GO:0005775: vacuolar lumen	1.23E-03
10	GO:0009506: plasmodesma	1.71E-03
11	GO:0000786: nucleosome	5.69E-03
12	GO:0005618: cell wall	5.74E-03
13	GO:0016021: integral component of membrane	6.04E-03
14	GO:0048471: perinuclear region of cytoplasm	7.58E-03
15	GO:0030076: light-harvesting complex	1.07E-02
16	GO:0005753: mitochondrial proton-transporting ATP synthase complex	1.07E-02
17	GO:0005802: trans-Golgi network	2.08E-02
18	GO:0009522: photosystem I	2.14E-02
19	GO:0009523: photosystem II	2.25E-02
20	GO:0032580: Golgi cisterna membrane	2.71E-02
21	GO:0005615: extracellular space	2.87E-02
22	GO:0005667: transcription factor complex	3.32E-02
23	GO:0005576: extracellular region	3.35E-02
24	GO:0019005: SCF ubiquitin ligase complex	3.71E-02
25	GO:0000325: plant-type vacuole	4.11E-02
26	GO:0031902: late endosome membrane	4.95E-02