Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009448: gamma-aminobutyric acid metabolic process0.00E+00
2GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
3GO:0006105: succinate metabolic process0.00E+00
4GO:0042906: xanthine transport0.00E+00
5GO:0032497: detection of lipopolysaccharide0.00E+00
6GO:0019484: beta-alanine catabolic process0.00E+00
7GO:0019481: L-alanine catabolic process, by transamination0.00E+00
8GO:0010730: negative regulation of hydrogen peroxide biosynthetic process0.00E+00
9GO:0070291: N-acylethanolamine metabolic process0.00E+00
10GO:0005997: xylulose metabolic process0.00E+00
11GO:0009415: response to water6.48E-06
12GO:0042344: indole glucosinolate catabolic process1.27E-05
13GO:0006624: vacuolar protein processing2.85E-05
14GO:0042732: D-xylose metabolic process1.18E-04
15GO:0009819: drought recovery2.69E-04
16GO:0046167: glycerol-3-phosphate biosynthetic process2.77E-04
17GO:0035266: meristem growth2.77E-04
18GO:0009450: gamma-aminobutyric acid catabolic process2.77E-04
19GO:0007292: female gamete generation2.77E-04
20GO:1990641: response to iron ion starvation2.77E-04
21GO:0010184: cytokinin transport2.77E-04
22GO:1903409: reactive oxygen species biosynthetic process2.77E-04
23GO:1902265: abscisic acid homeostasis2.77E-04
24GO:0071366: cellular response to indolebutyric acid stimulus2.77E-04
25GO:0009865: pollen tube adhesion2.77E-04
26GO:0006540: glutamate decarboxylation to succinate2.77E-04
27GO:0051603: proteolysis involved in cellular protein catabolic process3.24E-04
28GO:0048829: root cap development5.52E-04
29GO:0009257: 10-formyltetrahydrofolate biosynthetic process6.09E-04
30GO:0015720: allantoin transport6.09E-04
31GO:0010033: response to organic substance6.09E-04
32GO:0006641: triglyceride metabolic process6.09E-04
33GO:0015857: uracil transport6.09E-04
34GO:0006101: citrate metabolic process6.09E-04
35GO:0051788: response to misfolded protein6.09E-04
36GO:1902000: homogentisate catabolic process6.09E-04
37GO:0052544: defense response by callose deposition in cell wall6.38E-04
38GO:0030029: actin filament-based process9.88E-04
39GO:0009072: aromatic amino acid family metabolic process9.88E-04
40GO:0060968: regulation of gene silencing9.88E-04
41GO:0006954: inflammatory response9.88E-04
42GO:0019563: glycerol catabolic process9.88E-04
43GO:0071705: nitrogen compound transport9.88E-04
44GO:0045087: innate immune response1.02E-03
45GO:0042742: defense response to bacterium1.23E-03
46GO:0006882: cellular zinc ion homeostasis1.41E-03
47GO:0006572: tyrosine catabolic process1.41E-03
48GO:0048194: Golgi vesicle budding1.41E-03
49GO:0006020: inositol metabolic process1.41E-03
50GO:0010601: positive regulation of auxin biosynthetic process1.41E-03
51GO:0006072: glycerol-3-phosphate metabolic process1.41E-03
52GO:0015749: monosaccharide transport1.41E-03
53GO:0009113: purine nucleobase biosynthetic process1.41E-03
54GO:0009399: nitrogen fixation1.41E-03
55GO:1901332: negative regulation of lateral root development1.41E-03
56GO:0009269: response to desiccation1.54E-03
57GO:0009617: response to bacterium1.59E-03
58GO:0006646: phosphatidylethanolamine biosynthetic process1.89E-03
59GO:0009687: abscisic acid metabolic process1.89E-03
60GO:0015743: malate transport1.89E-03
61GO:0033320: UDP-D-xylose biosynthetic process1.89E-03
62GO:0006536: glutamate metabolic process1.89E-03
63GO:1901409: positive regulation of phosphorylation of RNA polymerase II C-terminal domain1.89E-03
64GO:0010188: response to microbial phytotoxin1.89E-03
65GO:0006878: cellular copper ion homeostasis1.89E-03
66GO:0007165: signal transduction2.10E-03
67GO:0009737: response to abscisic acid2.22E-03
68GO:0009409: response to cold2.40E-03
69GO:0043097: pyrimidine nucleoside salvage2.41E-03
70GO:0048544: recognition of pollen2.70E-03
71GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.98E-03
72GO:0015691: cadmium ion transport2.98E-03
73GO:0048827: phyllome development2.98E-03
74GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation2.98E-03
75GO:0048232: male gamete generation2.98E-03
76GO:0043248: proteasome assembly2.98E-03
77GO:0006206: pyrimidine nucleobase metabolic process2.98E-03
78GO:0006014: D-ribose metabolic process2.98E-03
79GO:0006635: fatty acid beta-oxidation3.09E-03
80GO:0016310: phosphorylation3.10E-03
81GO:0046686: response to cadmium ion3.26E-03
82GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.58E-03
83GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity3.58E-03
84GO:0045926: negative regulation of growth3.58E-03
85GO:0006694: steroid biosynthetic process3.58E-03
86GO:0031930: mitochondria-nucleus signaling pathway3.58E-03
87GO:0010286: heat acclimation3.98E-03
88GO:0006979: response to oxidative stress4.19E-03
89GO:0010044: response to aluminum ion4.23E-03
90GO:0098869: cellular oxidant detoxification4.23E-03
91GO:0048437: floral organ development4.23E-03
92GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.23E-03
93GO:0009396: folic acid-containing compound biosynthetic process4.23E-03
94GO:0006333: chromatin assembly or disassembly4.23E-03
95GO:0035556: intracellular signal transduction4.26E-03
96GO:0001666: response to hypoxia4.47E-03
97GO:0006102: isocitrate metabolic process4.90E-03
98GO:0006491: N-glycan processing4.90E-03
99GO:0006605: protein targeting4.90E-03
100GO:0010078: maintenance of root meristem identity4.90E-03
101GO:0006972: hyperosmotic response5.62E-03
102GO:0010262: somatic embryogenesis5.62E-03
103GO:0009817: defense response to fungus, incompatible interaction5.83E-03
104GO:0010311: lateral root formation6.13E-03
105GO:0009051: pentose-phosphate shunt, oxidative branch6.37E-03
106GO:0006098: pentose-phosphate shunt6.37E-03
107GO:0046916: cellular transition metal ion homeostasis6.37E-03
108GO:0006499: N-terminal protein myristoylation6.43E-03
109GO:0006811: ion transport6.43E-03
110GO:0009631: cold acclimation6.75E-03
111GO:0035999: tetrahydrofolate interconversion7.15E-03
112GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway7.15E-03
113GO:0008202: steroid metabolic process7.15E-03
114GO:0006099: tricarboxylic acid cycle7.73E-03
115GO:0009688: abscisic acid biosynthetic process7.97E-03
116GO:0006535: cysteine biosynthetic process from serine7.97E-03
117GO:0010468: regulation of gene expression8.01E-03
118GO:0006378: mRNA polyadenylation8.82E-03
119GO:0010015: root morphogenesis8.82E-03
120GO:0009682: induced systemic resistance8.82E-03
121GO:0006006: glucose metabolic process1.06E-02
122GO:0006541: glutamine metabolic process1.16E-02
123GO:0002237: response to molecule of bacterial origin1.16E-02
124GO:0007034: vacuolar transport1.16E-02
125GO:0009933: meristem structural organization1.16E-02
126GO:0000165: MAPK cascade1.16E-02
127GO:0090351: seedling development1.25E-02
128GO:0010030: positive regulation of seed germination1.25E-02
129GO:0009225: nucleotide-sugar metabolic process1.25E-02
130GO:0010167: response to nitrate1.25E-02
131GO:0005985: sucrose metabolic process1.25E-02
132GO:0006863: purine nucleobase transport1.35E-02
133GO:0019344: cysteine biosynthetic process1.46E-02
134GO:0045333: cellular respiration1.46E-02
135GO:0080167: response to karrikin1.47E-02
136GO:0006825: copper ion transport1.56E-02
137GO:0016192: vesicle-mediated transport1.56E-02
138GO:0016575: histone deacetylation1.56E-02
139GO:0009695: jasmonic acid biosynthetic process1.56E-02
140GO:0048367: shoot system development1.58E-02
141GO:0031348: negative regulation of defense response1.78E-02
142GO:0030433: ubiquitin-dependent ERAD pathway1.78E-02
143GO:0071215: cellular response to abscisic acid stimulus1.89E-02
144GO:0006468: protein phosphorylation1.95E-02
145GO:0010051: xylem and phloem pattern formation2.25E-02
146GO:0015991: ATP hydrolysis coupled proton transport2.25E-02
147GO:0042631: cellular response to water deprivation2.25E-02
148GO:0000226: microtubule cytoskeleton organization2.25E-02
149GO:0042391: regulation of membrane potential2.25E-02
150GO:0006511: ubiquitin-dependent protein catabolic process2.25E-02
151GO:0080022: primary root development2.25E-02
152GO:0046323: glucose import2.37E-02
153GO:0010154: fruit development2.37E-02
154GO:0009408: response to heat2.40E-02
155GO:0055114: oxidation-reduction process2.46E-02
156GO:0009845: seed germination2.50E-02
157GO:0048364: root development2.53E-02
158GO:0019252: starch biosynthetic process2.63E-02
159GO:0008654: phospholipid biosynthetic process2.63E-02
160GO:0009556: microsporogenesis2.63E-02
161GO:0009851: auxin biosynthetic process2.63E-02
162GO:0010183: pollen tube guidance2.63E-02
163GO:0009749: response to glucose2.63E-02
164GO:0009567: double fertilization forming a zygote and endosperm3.16E-02
165GO:0019760: glucosinolate metabolic process3.16E-02
166GO:0006914: autophagy3.16E-02
167GO:0010150: leaf senescence3.18E-02
168GO:0016126: sterol biosynthetic process3.58E-02
169GO:0006470: protein dephosphorylation3.64E-02
170GO:0010029: regulation of seed germination3.73E-02
171GO:0009627: systemic acquired resistance3.87E-02
172GO:0009414: response to water deprivation3.89E-02
173GO:0006950: response to stress4.02E-02
174GO:0048573: photoperiodism, flowering4.02E-02
175GO:0009651: response to salt stress4.15E-02
176GO:0008219: cell death4.33E-02
177GO:0045944: positive regulation of transcription from RNA polymerase II promoter4.55E-02
178GO:0010043: response to zinc ion4.79E-02
179GO:0010119: regulation of stomatal movement4.79E-02
180GO:0009611: response to wounding5.00E-02
RankGO TermAdjusted P value
1GO:0015211: purine nucleoside transmembrane transporter activity0.00E+00
2GO:0047412: N-(long-chain-acyl)ethanolamine deacylase activity0.00E+00
3GO:0042907: xanthine transmembrane transporter activity0.00E+00
4GO:0047787: delta4-3-oxosteroid 5beta-reductase activity0.00E+00
5GO:0009045: xylose isomerase activity0.00E+00
6GO:0010293: abscisic aldehyde oxidase activity0.00E+00
7GO:0103073: anandamide amidohydrolase activity0.00E+00
8GO:0004334: fumarylacetoacetase activity0.00E+00
9GO:0102077: oleamide hydrolase activity0.00E+00
10GO:0004491: methylmalonate-semialdehyde dehydrogenase (acylating) activity0.00E+00
11GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
12GO:0034387: 4-aminobutyrate:pyruvate transaminase activity0.00E+00
13GO:0004370: glycerol kinase activity0.00E+00
14GO:0009679: hexose:proton symporter activity2.77E-04
15GO:0035671: enone reductase activity2.77E-04
16GO:0008692: 3-hydroxybutyryl-CoA epimerase activity2.77E-04
17GO:0001530: lipopolysaccharide binding2.77E-04
18GO:0046870: cadmium ion binding2.77E-04
19GO:0004112: cyclic-nucleotide phosphodiesterase activity2.77E-04
20GO:0004856: xylulokinase activity2.77E-04
21GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.77E-04
22GO:0003867: 4-aminobutyrate transaminase activity2.77E-04
23GO:0016301: kinase activity3.12E-04
24GO:0004197: cysteine-type endopeptidase activity3.65E-04
25GO:0032791: lead ion binding6.09E-04
26GO:0005274: allantoin uptake transmembrane transporter activity6.09E-04
27GO:0004609: phosphatidylserine decarboxylase activity6.09E-04
28GO:0003994: aconitate hydratase activity6.09E-04
29GO:0004488: methylenetetrahydrofolate dehydrogenase (NADP+) activity6.09E-04
30GO:0004477: methenyltetrahydrofolate cyclohydrolase activity6.09E-04
31GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity6.09E-04
32GO:0004839: ubiquitin activating enzyme activity6.09E-04
33GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity6.09E-04
34GO:0004329: formate-tetrahydrofolate ligase activity6.09E-04
35GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding6.09E-04
36GO:0019200: carbohydrate kinase activity6.09E-04
37GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.26E-04
38GO:0005047: signal recognition particle binding9.88E-04
39GO:0019829: cation-transporting ATPase activity9.88E-04
40GO:0017150: tRNA dihydrouridine synthase activity9.88E-04
41GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity9.88E-04
42GO:0004383: guanylate cyclase activity9.88E-04
43GO:0005524: ATP binding1.37E-03
44GO:0004165: dodecenoyl-CoA delta-isomerase activity1.41E-03
45GO:0004300: enoyl-CoA hydratase activity1.41E-03
46GO:0001653: peptide receptor activity1.41E-03
47GO:0048027: mRNA 5'-UTR binding1.41E-03
48GO:0015086: cadmium ion transmembrane transporter activity1.41E-03
49GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.41E-03
50GO:0004108: citrate (Si)-synthase activity1.41E-03
51GO:0030527: structural constituent of chromatin1.41E-03
52GO:0004707: MAP kinase activity1.54E-03
53GO:0004737: pyruvate decarboxylase activity1.89E-03
54GO:0004345: glucose-6-phosphate dehydrogenase activity1.89E-03
55GO:0043015: gamma-tubulin binding1.89E-03
56GO:0015210: uracil transmembrane transporter activity1.89E-03
57GO:0004031: aldehyde oxidase activity1.89E-03
58GO:0050302: indole-3-acetaldehyde oxidase activity1.89E-03
59GO:0005253: anion channel activity1.89E-03
60GO:0009916: alternative oxidase activity1.89E-03
61GO:0004356: glutamate-ammonia ligase activity2.41E-03
62GO:0010294: abscisic acid glucosyltransferase activity2.41E-03
63GO:0015145: monosaccharide transmembrane transporter activity2.41E-03
64GO:0008641: small protein activating enzyme activity2.41E-03
65GO:0016773: phosphotransferase activity, alcohol group as acceptor2.41E-03
66GO:0004040: amidase activity2.41E-03
67GO:0030976: thiamine pyrophosphate binding2.98E-03
68GO:0048040: UDP-glucuronate decarboxylase activity2.98E-03
69GO:0004629: phospholipase C activity2.98E-03
70GO:0019137: thioglucosidase activity2.98E-03
71GO:0000293: ferric-chelate reductase activity2.98E-03
72GO:0036402: proteasome-activating ATPase activity2.98E-03
73GO:0004124: cysteine synthase activity3.58E-03
74GO:0070403: NAD+ binding3.58E-03
75GO:0004849: uridine kinase activity3.58E-03
76GO:0070300: phosphatidic acid binding3.58E-03
77GO:0004012: phospholipid-translocating ATPase activity3.58E-03
78GO:0004747: ribokinase activity3.58E-03
79GO:0004602: glutathione peroxidase activity3.58E-03
80GO:0004435: phosphatidylinositol phospholipase C activity3.58E-03
81GO:0016831: carboxy-lyase activity4.23E-03
82GO:0015140: malate transmembrane transporter activity4.23E-03
83GO:0004869: cysteine-type endopeptidase inhibitor activity4.90E-03
84GO:0004525: ribonuclease III activity4.90E-03
85GO:0008865: fructokinase activity4.90E-03
86GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.62E-03
87GO:0005375: copper ion transmembrane transporter activity5.62E-03
88GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity6.37E-03
89GO:0050897: cobalt ion binding6.75E-03
90GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.15E-03
91GO:0005507: copper ion binding7.20E-03
92GO:0004672: protein kinase activity8.74E-03
93GO:0008081: phosphoric diester hydrolase activity1.06E-02
94GO:0005509: calcium ion binding1.15E-02
95GO:0004175: endopeptidase activity1.16E-02
96GO:0030552: cAMP binding1.25E-02
97GO:0030553: cGMP binding1.25E-02
98GO:0017025: TBP-class protein binding1.25E-02
99GO:0031625: ubiquitin protein ligase binding1.43E-02
100GO:0004407: histone deacetylase activity1.46E-02
101GO:0043424: protein histidine kinase binding1.56E-02
102GO:0005345: purine nucleobase transmembrane transporter activity1.56E-02
103GO:0005216: ion channel activity1.56E-02
104GO:0004674: protein serine/threonine kinase activity1.57E-02
105GO:0005249: voltage-gated potassium channel activity2.25E-02
106GO:0030551: cyclic nucleotide binding2.25E-02
107GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity2.37E-02
108GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.37E-02
109GO:0030170: pyridoxal phosphate binding2.56E-02
110GO:0005516: calmodulin binding2.61E-02
111GO:0015144: carbohydrate transmembrane transporter activity2.76E-02
112GO:0005351: sugar:proton symporter activity3.11E-02
113GO:0008237: metallopeptidase activity3.30E-02
114GO:0005200: structural constituent of cytoskeleton3.30E-02
115GO:0102483: scopolin beta-glucosidase activity4.02E-02
116GO:0030247: polysaccharide binding4.02E-02
117GO:0005096: GTPase activator activity4.48E-02
118GO:0003824: catalytic activity4.60E-02
119GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.64E-02
120GO:0004222: metalloendopeptidase activity4.64E-02
121GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.79E-02
122GO:0046982: protein heterodimerization activity4.81E-02
123GO:0000287: magnesium ion binding4.81E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0000323: lytic vacuole2.85E-05
3GO:0005886: plasma membrane3.38E-05
4GO:0005829: cytosol9.69E-05
5GO:0005773: vacuole1.21E-03
6GO:0005777: peroxisome1.34E-03
7GO:0005849: mRNA cleavage factor complex1.41E-03
8GO:0016021: integral component of membrane1.71E-03
9GO:0033179: proton-transporting V-type ATPase, V0 domain1.89E-03
10GO:0005776: autophagosome1.89E-03
11GO:0031597: cytosolic proteasome complex3.58E-03
12GO:0000815: ESCRT III complex3.58E-03
13GO:0031595: nuclear proteasome complex4.23E-03
14GO:0030131: clathrin adaptor complex4.90E-03
15GO:0000307: cyclin-dependent protein kinase holoenzyme complex5.62E-03
16GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.62E-03
17GO:0005774: vacuolar membrane6.99E-03
18GO:0000786: nucleosome7.07E-03
19GO:0008540: proteasome regulatory particle, base subcomplex7.15E-03
20GO:0030125: clathrin vesicle coat7.97E-03
21GO:0016602: CCAAT-binding factor complex1.06E-02
22GO:0005764: lysosome1.16E-02
23GO:0005783: endoplasmic reticulum1.52E-02
24GO:0070469: respiratory chain1.56E-02
25GO:0010008: endosome membrane1.58E-02
26GO:0005905: clathrin-coated pit1.67E-02
27GO:0031410: cytoplasmic vesicle1.78E-02
28GO:0005794: Golgi apparatus1.88E-02
29GO:0031965: nuclear membrane2.63E-02
30GO:0000785: chromatin2.89E-02
31GO:0005615: extracellular space3.56E-02
32GO:0005737: cytoplasm3.80E-02
Gene type



Gene DE type