Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01480

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0070212: protein poly-ADP-ribosylation0.00E+00
3GO:0045792: negative regulation of cell size0.00E+00
4GO:0030643: cellular phosphate ion homeostasis7.76E-06
5GO:0003400: regulation of COPII vesicle coating4.18E-05
6GO:0009270: response to humidity4.18E-05
7GO:0046506: sulfolipid biosynthetic process4.18E-05
8GO:0060862: negative regulation of floral organ abscission4.18E-05
9GO:1900424: regulation of defense response to bacterium4.18E-05
10GO:0080093: regulation of photorespiration4.18E-05
11GO:0031998: regulation of fatty acid beta-oxidation4.18E-05
12GO:0019510: S-adenosylhomocysteine catabolic process4.18E-05
13GO:0006071: glycerol metabolic process8.51E-05
14GO:0034976: response to endoplasmic reticulum stress8.51E-05
15GO:0009626: plant-type hypersensitive response9.48E-05
16GO:0033353: S-adenosylmethionine cycle1.04E-04
17GO:0046475: glycerophospholipid catabolic process1.04E-04
18GO:0019725: cellular homeostasis1.04E-04
19GO:0031349: positive regulation of defense response1.04E-04
20GO:0006952: defense response1.44E-04
21GO:0009306: protein secretion1.58E-04
22GO:0045793: positive regulation of cell size1.78E-04
23GO:0010186: positive regulation of cellular defense response1.78E-04
24GO:0048281: inflorescence morphogenesis1.78E-04
25GO:0010581: regulation of starch biosynthetic process1.78E-04
26GO:0006515: misfolded or incompletely synthesized protein catabolic process2.63E-04
27GO:0006346: methylation-dependent chromatin silencing3.53E-04
28GO:0060548: negative regulation of cell death3.53E-04
29GO:0045727: positive regulation of translation3.53E-04
30GO:1902584: positive regulation of response to water deprivation3.53E-04
31GO:0033356: UDP-L-arabinose metabolic process3.53E-04
32GO:0006097: glyoxylate cycle4.50E-04
33GO:0009247: glycolipid biosynthetic process4.50E-04
34GO:0045927: positive regulation of growth4.50E-04
35GO:0010942: positive regulation of cell death5.51E-04
36GO:0006121: mitochondrial electron transport, succinate to ubiquinone5.51E-04
37GO:0034389: lipid particle organization6.58E-04
38GO:0080186: developmental vegetative growth7.69E-04
39GO:0071669: plant-type cell wall organization or biogenesis7.69E-04
40GO:0042742: defense response to bacterium8.10E-04
41GO:0009408: response to heat9.16E-04
42GO:0010497: plasmodesmata-mediated intercellular transport1.00E-03
43GO:0046685: response to arsenic-containing substance1.13E-03
44GO:0009651: response to salt stress1.14E-03
45GO:2000280: regulation of root development1.25E-03
46GO:0009409: response to cold1.27E-03
47GO:0009299: mRNA transcription1.39E-03
48GO:0009870: defense response signaling pathway, resistance gene-dependent1.39E-03
49GO:0016441: posttranscriptional gene silencing1.39E-03
50GO:0009073: aromatic amino acid family biosynthetic process1.53E-03
51GO:0009807: lignan biosynthetic process1.53E-03
52GO:0015706: nitrate transport1.67E-03
53GO:0006108: malate metabolic process1.82E-03
54GO:0010075: regulation of meristem growth1.82E-03
55GO:0009266: response to temperature stimulus1.97E-03
56GO:0009934: regulation of meristem structural organization1.97E-03
57GO:0010167: response to nitrate2.13E-03
58GO:0016036: cellular response to phosphate starvation2.26E-03
59GO:0006457: protein folding2.58E-03
60GO:0061077: chaperone-mediated protein folding2.80E-03
61GO:0007005: mitochondrion organization2.97E-03
62GO:0006730: one-carbon metabolic process2.97E-03
63GO:0006817: phosphate ion transport3.33E-03
64GO:0048868: pollen tube development3.91E-03
65GO:0010183: pollen tube guidance4.31E-03
66GO:0006891: intra-Golgi vesicle-mediated transport4.51E-03
67GO:0010193: response to ozone4.51E-03
68GO:0006468: protein phosphorylation4.92E-03
69GO:0009567: double fertilization forming a zygote and endosperm5.15E-03
70GO:0009816: defense response to bacterium, incompatible interaction6.04E-03
71GO:0009627: systemic acquired resistance6.27E-03
72GO:0042128: nitrate assimilation6.27E-03
73GO:0006888: ER to Golgi vesicle-mediated transport6.50E-03
74GO:0016311: dephosphorylation6.74E-03
75GO:0030244: cellulose biosynthetic process6.98E-03
76GO:0009832: plant-type cell wall biogenesis7.22E-03
77GO:0006099: tricarboxylic acid cycle8.48E-03
78GO:0006839: mitochondrial transport9.01E-03
79GO:0042542: response to hydrogen peroxide9.55E-03
80GO:0051707: response to other organism9.82E-03
81GO:0009965: leaf morphogenesis1.07E-02
82GO:0009555: pollen development1.21E-02
83GO:0009909: regulation of flower development1.30E-02
84GO:0009553: embryo sac development1.52E-02
85GO:0009624: response to nematode1.55E-02
86GO:0040008: regulation of growth2.22E-02
87GO:0009414: response to water deprivation2.39E-02
88GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.48E-02
89GO:0006470: protein dephosphorylation2.52E-02
90GO:0007166: cell surface receptor signaling pathway2.52E-02
91GO:0080167: response to karrikin3.65E-02
92GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.74E-02
93GO:0010200: response to chitin3.74E-02
94GO:0046686: response to cadmium ion3.81E-02
95GO:0044550: secondary metabolite biosynthetic process3.87E-02
96GO:0045454: cell redox homeostasis4.15E-02
97GO:0006886: intracellular protein transport4.24E-02
98GO:0007275: multicellular organism development4.79E-02
99GO:0006629: lipid metabolic process4.81E-02
RankGO TermAdjusted P value
1GO:0046507: UDPsulfoquinovose synthase activity0.00E+00
2GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
3GO:0008889: glycerophosphodiester phosphodiesterase activity2.33E-05
4GO:0005090: Sar guanyl-nucleotide exchange factor activity4.18E-05
5GO:0004013: adenosylhomocysteinase activity4.18E-05
6GO:0080042: ADP-glucose pyrophosphohydrolase activity4.18E-05
7GO:0004338: glucan exo-1,3-beta-glucosidase activity1.04E-04
8GO:0080041: ADP-ribose pyrophosphohydrolase activity1.04E-04
9GO:0017110: nucleoside-diphosphatase activity1.04E-04
10GO:0070361: mitochondrial light strand promoter anti-sense binding1.04E-04
11GO:0052691: UDP-arabinopyranose mutase activity1.04E-04
12GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity1.04E-04
13GO:0051082: unfolded protein binding1.13E-04
14GO:0005524: ATP binding1.69E-04
15GO:0016866: intramolecular transferase activity3.53E-04
16GO:0047631: ADP-ribose diphosphatase activity4.50E-04
17GO:0000104: succinate dehydrogenase activity4.50E-04
18GO:0000210: NAD+ diphosphatase activity5.51E-04
19GO:0016615: malate dehydrogenase activity5.51E-04
20GO:0051020: GTPase binding6.58E-04
21GO:0030060: L-malate dehydrogenase activity6.58E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity8.84E-04
23GO:0005544: calcium-dependent phospholipid binding8.84E-04
24GO:0051287: NAD binding9.18E-04
25GO:0015112: nitrate transmembrane transporter activity1.25E-03
26GO:0004713: protein tyrosine kinase activity1.39E-03
27GO:0008559: xenobiotic-transporting ATPase activity1.53E-03
28GO:0031072: heat shock protein binding1.82E-03
29GO:0015114: phosphate ion transmembrane transporter activity1.82E-03
30GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.97E-03
31GO:0008146: sulfotransferase activity2.13E-03
32GO:0004674: protein serine/threonine kinase activity2.23E-03
33GO:0004725: protein tyrosine phosphatase activity2.29E-03
34GO:0004176: ATP-dependent peptidase activity2.80E-03
35GO:0008810: cellulase activity3.15E-03
36GO:0016760: cellulose synthase (UDP-forming) activity3.15E-03
37GO:0003756: protein disulfide isomerase activity3.33E-03
38GO:0043531: ADP binding4.08E-03
39GO:0050662: coenzyme binding4.11E-03
40GO:0016853: isomerase activity4.11E-03
41GO:0016791: phosphatase activity5.15E-03
42GO:0016301: kinase activity6.00E-03
43GO:0004722: protein serine/threonine phosphatase activity6.04E-03
44GO:0004721: phosphoprotein phosphatase activity6.50E-03
45GO:0016798: hydrolase activity, acting on glycosyl bonds6.50E-03
46GO:0030247: polysaccharide binding6.50E-03
47GO:0008236: serine-type peptidase activity6.74E-03
48GO:0005096: GTPase activator activity7.22E-03
49GO:0030145: manganese ion binding7.72E-03
50GO:0003746: translation elongation factor activity8.23E-03
51GO:0003993: acid phosphatase activity8.48E-03
52GO:0004712: protein serine/threonine/tyrosine kinase activity8.75E-03
53GO:0016887: ATPase activity1.05E-02
54GO:0031625: ubiquitin protein ligase binding1.30E-02
55GO:0045735: nutrient reservoir activity1.36E-02
56GO:0080043: quercetin 3-O-glucosyltransferase activity1.46E-02
57GO:0080044: quercetin 7-O-glucosyltransferase activity1.46E-02
58GO:0016758: transferase activity, transferring hexosyl groups1.79E-02
59GO:0005515: protein binding1.95E-02
60GO:0004252: serine-type endopeptidase activity1.96E-02
61GO:0008565: protein transporter activity2.07E-02
62GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.18E-02
63GO:0008194: UDP-glycosyltransferase activity2.48E-02
64GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.72E-02
65GO:0000287: magnesium ion binding3.09E-02
66GO:0004601: peroxidase activity3.13E-02
67GO:0004842: ubiquitin-protein transferase activity3.38E-02
68GO:0004497: monooxygenase activity3.65E-02
69GO:0008270: zinc ion binding3.74E-02
70GO:0061630: ubiquitin protein ligase activity3.78E-02
71GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.38E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane7.42E-08
2GO:0000138: Golgi trans cisterna4.18E-05
3GO:0031351: integral component of plastid membrane4.18E-05
4GO:0005795: Golgi stack7.51E-05
5GO:0005783: endoplasmic reticulum2.56E-04
6GO:0005774: vacuolar membrane2.57E-04
7GO:0005618: cell wall3.42E-04
8GO:0009986: cell surface7.69E-04
9GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)8.84E-04
10GO:0005811: lipid particle1.00E-03
11GO:0009506: plasmodesma1.08E-03
12GO:0048046: apoplast1.31E-03
13GO:0030176: integral component of endoplasmic reticulum membrane2.13E-03
14GO:0005773: vacuole2.55E-03
15GO:0005788: endoplasmic reticulum lumen6.04E-03
16GO:0000151: ubiquitin ligase complex6.98E-03
17GO:0000325: plant-type vacuole7.72E-03
18GO:0090406: pollen tube9.82E-03
19GO:0005737: cytoplasm1.06E-02
20GO:0005623: cell1.86E-02
21GO:0005759: mitochondrial matrix2.14E-02
22GO:0016020: membrane2.17E-02
23GO:0005829: cytosol2.66E-02
24GO:0046658: anchored component of plasma membrane2.80E-02
25GO:0009536: plastid3.01E-02
26GO:0005743: mitochondrial inner membrane4.57E-02
Gene type



Gene DE type