co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G01080

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071370: cellular response to gibberellin stimulus	0.00E+00
2	GO:0009259: ribonucleotide metabolic process	0.00E+00
3	GO:0015822: ornithine transport	0.00E+00
4	GO:0009715: chalcone biosynthetic process	0.00E+00
5	GO:0090393: sepal giant cell development	0.00E+00
6	GO:0010336: gibberellic acid homeostasis	0.00E+00
7	GO:0071555: cell wall organization	4.14E-07
8	GO:0080167: response to karrikin	1.63E-05
9	GO:0006546: glycine catabolic process	1.93E-05
10	GO:0009617: response to bacterium	5.61E-05
11	GO:0017148: negative regulation of translation	6.56E-05
12	GO:0007155: cell adhesion	1.13E-04
13	GO:1901599: (-)-pinoresinol biosynthetic process	1.56E-04
14	GO:0006659: phosphatidylserine biosynthetic process	1.56E-04
15	GO:0000066: mitochondrial ornithine transport	1.56E-04
16	GO:0009186: deoxyribonucleoside diphosphate metabolic process	1.56E-04
17	GO:0019510: S-adenosylhomocysteine catabolic process	1.56E-04
18	GO:0010597: green leaf volatile biosynthetic process	1.56E-04
19	GO:1901349: glucosinolate transport	1.56E-04
20	GO:0090449: phloem glucosinolate loading	1.56E-04
21	GO:0009263: deoxyribonucleotide biosynthetic process	1.56E-04
22	GO:0009611: response to wounding	1.94E-04
23	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.55E-04
24	GO:0015712: hexose phosphate transport	3.55E-04
25	GO:0009629: response to gravity	3.55E-04
26	GO:0033353: S-adenosylmethionine cycle	3.55E-04
27	GO:0015786: UDP-glucose transport	3.55E-04
28	GO:0019253: reductive pentose-phosphate cycle	4.23E-04
29	GO:0005985: sucrose metabolic process	4.74E-04
30	GO:0009833: plant-type primary cell wall biogenesis	5.28E-04
31	GO:0006833: water transport	5.28E-04
32	GO:0035436: triose phosphate transmembrane transport	5.82E-04
33	GO:0015783: GDP-fucose transport	5.82E-04
34	GO:0006000: fructose metabolic process	5.82E-04
35	GO:0017157: regulation of exocytosis	5.82E-04
36	GO:0015840: urea transport	5.82E-04
37	GO:0009695: jasmonic acid biosynthetic process	6.43E-04
38	GO:0031408: oxylipin biosynthetic process	7.05E-04
39	GO:0032877: positive regulation of DNA endoreduplication	8.33E-04
40	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.33E-04
41	GO:0072334: UDP-galactose transmembrane transport	8.33E-04
42	GO:0080170: hydrogen peroxide transmembrane transport	8.33E-04
43	GO:0034220: ion transmembrane transport	1.05E-03
44	GO:0006021: inositol biosynthetic process	1.10E-03
45	GO:0009902: chloroplast relocation	1.10E-03
46	GO:0009694: jasmonic acid metabolic process	1.10E-03
47	GO:0006542: glutamine biosynthetic process	1.10E-03
48	GO:0019676: ammonia assimilation cycle	1.10E-03
49	GO:0019464: glycine decarboxylation via glycine cleavage system	1.10E-03
50	GO:0009765: photosynthesis, light harvesting	1.10E-03
51	GO:0015713: phosphoglycerate transport	1.10E-03
52	GO:0034440: lipid oxidation	1.10E-03
53	GO:0071554: cell wall organization or biogenesis	1.39E-03
54	GO:0006810: transport	1.71E-03
55	GO:0009117: nucleotide metabolic process	1.72E-03
56	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.72E-03
57	GO:0006559: L-phenylalanine catabolic process	1.72E-03
58	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.06E-03
59	GO:0050790: regulation of catalytic activity	2.42E-03
60	GO:0080027: response to herbivore	2.42E-03
61	GO:0009813: flavonoid biosynthetic process	2.72E-03
62	GO:0031540: regulation of anthocyanin biosynthetic process	2.80E-03
63	GO:0010218: response to far red light	2.85E-03
64	GO:0006002: fructose 6-phosphate metabolic process	3.21E-03
65	GO:0022900: electron transport chain	3.21E-03
66	GO:0016051: carbohydrate biosynthetic process	3.27E-03
67	GO:0048589: developmental growth	3.63E-03
68	GO:0010114: response to red light	4.21E-03
69	GO:0010192: mucilage biosynthetic process	4.52E-03
70	GO:0051555: flavonol biosynthetic process	4.52E-03
71	GO:0000272: polysaccharide catabolic process	4.99E-03
72	GO:0009807: lignan biosynthetic process	4.99E-03
73	GO:0050826: response to freezing	5.98E-03
74	GO:0009725: response to hormone	5.98E-03
75	GO:0006094: gluconeogenesis	5.98E-03
76	GO:0005986: sucrose biosynthetic process	5.98E-03
77	GO:0006857: oligopeptide transport	6.06E-03
78	GO:0048768: root hair cell tip growth	6.50E-03
79	GO:0005975: carbohydrate metabolic process	6.52E-03
80	GO:0042545: cell wall modification	7.82E-03
81	GO:0007010: cytoskeleton organization	8.16E-03
82	GO:0051726: regulation of cell cycle	8.55E-03
83	GO:0009768: photosynthesis, light harvesting in photosystem I	8.74E-03
84	GO:0009753: response to jasmonic acid	9.25E-03
85	GO:0051260: protein homooligomerization	9.34E-03
86	GO:0030245: cellulose catabolic process	9.96E-03
87	GO:0006730: one-carbon metabolic process	9.96E-03
88	GO:0009294: DNA mediated transformation	1.06E-02
89	GO:0009414: response to water deprivation	1.15E-02
90	GO:0000271: polysaccharide biosynthetic process	1.25E-02
91	GO:0080022: primary root development	1.25E-02
92	GO:0015991: ATP hydrolysis coupled proton transport	1.25E-02
93	GO:0045489: pectin biosynthetic process	1.32E-02
94	GO:0006520: cellular amino acid metabolic process	1.32E-02
95	GO:0015986: ATP synthesis coupled proton transport	1.39E-02
96	GO:0045490: pectin catabolic process	1.40E-02
97	GO:0019252: starch biosynthetic process	1.46E-02
98	GO:0008654: phospholipid biosynthetic process	1.46E-02
99	GO:0010228: vegetative to reproductive phase transition of meristem	1.46E-02
100	GO:0009791: post-embryonic development	1.46E-02
101	GO:0048235: pollen sperm cell differentiation	1.61E-02
102	GO:0007264: small GTPase mediated signal transduction	1.61E-02
103	GO:0010583: response to cyclopentenone	1.61E-02
104	GO:0019761: glucosinolate biosynthetic process	1.61E-02
105	GO:1901657: glycosyl compound metabolic process	1.68E-02
106	GO:0010090: trichome morphogenesis	1.68E-02
107	GO:0016125: sterol metabolic process	1.76E-02
108	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.07E-02
109	GO:0042128: nitrate assimilation	2.16E-02
110	GO:0046686: response to cadmium ion	2.31E-02
111	GO:0030244: cellulose biosynthetic process	2.41E-02
112	GO:0018298: protein-chromophore linkage	2.41E-02
113	GO:0009817: defense response to fungus, incompatible interaction	2.41E-02
114	GO:0007049: cell cycle	2.42E-02
115	GO:0009832: plant-type cell wall biogenesis	2.50E-02
116	GO:0048767: root hair elongation	2.50E-02
117	GO:0009651: response to salt stress	2.55E-02
118	GO:0009407: toxin catabolic process	2.58E-02
119	GO:0007568: aging	2.67E-02
120	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.78E-02
121	GO:0009637: response to blue light	2.85E-02
122	GO:0009867: jasmonic acid mediated signaling pathway	2.85E-02
123	GO:0006839: mitochondrial transport	3.13E-02
124	GO:0006631: fatty acid metabolic process	3.22E-02
125	GO:0042542: response to hydrogen peroxide	3.32E-02
126	GO:0009926: auxin polar transport	3.42E-02
127	GO:0009744: response to sucrose	3.42E-02
128	GO:0051707: response to other organism	3.42E-02
129	GO:0042546: cell wall biogenesis	3.51E-02
130	GO:0009644: response to high light intensity	3.61E-02
131	GO:0009636: response to toxic substance	3.71E-02
132	GO:0032259: methylation	3.79E-02
133	GO:0006260: DNA replication	3.91E-02
134	GO:0009408: response to heat	3.96E-02
135	GO:0010224: response to UV-B	4.33E-02
136	GO:0008152: metabolic process	4.36E-02
137	GO:0006096: glycolytic process	4.75E-02
138	GO:0043086: negative regulation of catalytic activity	4.75E-02
139	GO:0048367: shoot system development	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
2	GO:0030795: jasmonate O-methyltransferase activity	0.00E+00
3	GO:0102078: methyl jasmonate methylesterase activity	0.00E+00
4	GO:1990055: phenylacetaldehyde synthase activity	0.00E+00
5	GO:0030598: rRNA N-glycosylase activity	0.00E+00
6	GO:0102118: gibberellin A4 carboxyl methyltransferase activity	0.00E+00
7	GO:0016210: naringenin-chalcone synthase activity	0.00E+00
8	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
9	GO:0016759: cellulose synthase activity	6.12E-06
10	GO:0016757: transferase activity, transferring glycosyl groups	1.30E-05
11	GO:0090448: glucosinolate:proton symporter activity	1.56E-04
12	GO:0044715: 8-oxo-dGDP phosphatase activity	1.56E-04
13	GO:0004837: tyrosine decarboxylase activity	1.56E-04
14	GO:0042349: guiding stereospecific synthesis activity	1.56E-04
15	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.56E-04
16	GO:0004013: adenosylhomocysteinase activity	1.56E-04
17	GO:0010341: gibberellin carboxyl-O-methyltransferase activity	1.56E-04
18	GO:0010313: phytochrome binding	1.56E-04
19	GO:0004575: sucrose alpha-glucosidase activity	2.08E-04
20	GO:0004748: ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	3.55E-04
21	GO:0004618: phosphoglycerate kinase activity	3.55E-04
22	GO:0004047: aminomethyltransferase activity	3.55E-04
23	GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity	3.55E-04
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.55E-04
25	GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity	3.55E-04
26	GO:0000064: L-ornithine transmembrane transporter activity	3.55E-04
27	GO:0004512: inositol-3-phosphate synthase activity	3.55E-04
28	GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity	3.55E-04
29	GO:0016165: linoleate 13S-lipoxygenase activity	5.82E-04
30	GO:0071917: triose-phosphate transmembrane transporter activity	5.82E-04
31	GO:0005457: GDP-fucose transmembrane transporter activity	5.82E-04
32	GO:0004148: dihydrolipoyl dehydrogenase activity	5.82E-04
33	GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity	5.82E-04
34	GO:0005460: UDP-glucose transmembrane transporter activity	8.33E-04
35	GO:0004375: glycine dehydrogenase (decarboxylating) activity	8.33E-04
36	GO:0048027: mRNA 5'-UTR binding	8.33E-04
37	GO:0035529: NADH pyrophosphatase activity	8.33E-04
38	GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity	8.33E-04
39	GO:0015204: urea transmembrane transporter activity	1.10E-03
40	GO:0015120: phosphoglycerate transmembrane transporter activity	1.10E-03
41	GO:0019905: syntaxin binding	1.10E-03
42	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.10E-03
43	GO:0052793: pectin acetylesterase activity	1.10E-03
44	GO:0098599: palmitoyl hydrolase activity	1.10E-03
45	GO:0045430: chalcone isomerase activity	1.10E-03
46	GO:0046527: glucosyltransferase activity	1.10E-03
47	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.40E-03
48	GO:0004356: glutamate-ammonia ligase activity	1.40E-03
49	GO:0005459: UDP-galactose transmembrane transporter activity	1.40E-03
50	GO:0017137: Rab GTPase binding	1.40E-03
51	GO:0008474: palmitoyl-(protein) hydrolase activity	1.72E-03
52	GO:0008429: phosphatidylethanolamine binding	1.72E-03
53	GO:0102229: amylopectin maltohydrolase activity	1.72E-03
54	GO:0042578: phosphoric ester hydrolase activity	1.72E-03
55	GO:0016413: O-acetyltransferase activity	1.88E-03
56	GO:0015250: water channel activity	1.99E-03
57	GO:0016161: beta-amylase activity	2.06E-03
58	GO:0051753: mannan synthase activity	2.06E-03
59	GO:0015297: antiporter activity	2.13E-03
60	GO:0043295: glutathione binding	2.42E-03
61	GO:0004564: beta-fructofuranosidase activity	2.80E-03
62	GO:0005544: calcium-dependent phospholipid binding	2.80E-03
63	GO:0005215: transporter activity	3.75E-03
64	GO:0046961: proton-transporting ATPase activity, rotational mechanism	4.99E-03
65	GO:0004860: protein kinase inhibitor activity	4.99E-03
66	GO:0016740: transferase activity	5.52E-03
67	GO:0004565: beta-galactosidase activity	5.98E-03
68	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	6.21E-03
69	GO:0045330: aspartyl esterase activity	6.27E-03
70	GO:0051119: sugar transmembrane transporter activity	7.04E-03
71	GO:0031409: pigment binding	7.59E-03
72	GO:0030599: pectinesterase activity	7.59E-03
73	GO:0019706: protein-cysteine S-palmitoyltransferase activity	9.34E-03
74	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.96E-03
75	GO:0016760: cellulose synthase (UDP-forming) activity	1.06E-02
76	GO:0008810: cellulase activity	1.06E-02
77	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.12E-02
78	GO:0046910: pectinesterase inhibitor activity	1.30E-02
79	GO:0005355: glucose transmembrane transporter activity	1.39E-02
80	GO:0019901: protein kinase binding	1.46E-02
81	GO:0004872: receptor activity	1.46E-02
82	GO:0048038: quinone binding	1.54E-02
83	GO:0004518: nuclease activity	1.61E-02
84	GO:0005200: structural constituent of cytoskeleton	1.84E-02
85	GO:0008483: transaminase activity	1.84E-02
86	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.84E-02
87	GO:0016168: chlorophyll binding	2.07E-02
88	GO:0004672: protein kinase activity	2.11E-02
89	GO:0102483: scopolin beta-glucosidase activity	2.24E-02
90	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.32E-02
91	GO:0005096: GTPase activator activity	2.50E-02
92	GO:0050660: flavin adenine dinucleotide binding	2.51E-02
93	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.58E-02
94	GO:0050897: cobalt ion binding	2.67E-02
95	GO:0004497: monooxygenase activity	2.69E-02
96	GO:0005507: copper ion binding	2.73E-02
97	GO:0052689: carboxylic ester hydrolase activity	2.97E-02
98	GO:0008422: beta-glucosidase activity	3.04E-02
99	GO:0050661: NADP binding	3.13E-02
100	GO:0004364: glutathione transferase activity	3.32E-02
101	GO:0051537: 2 iron, 2 sulfur cluster binding	3.61E-02
102	GO:0016787: hydrolase activity	3.68E-02
103	GO:0051287: NAD binding	3.91E-02
104	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0097708: intracellular vesicle	0.00E+00
2	GO:0005775: vacuolar lumen	1.03E-05
3	GO:0005794: Golgi apparatus	7.04E-05
4	GO:0000139: Golgi membrane	8.18E-05
5	GO:0031225: anchored component of membrane	9.36E-05
6	GO:0005971: ribonucleoside-diphosphate reductase complex	1.56E-04
7	GO:0005773: vacuole	2.94E-04
8	GO:0009505: plant-type cell wall	3.21E-04
9	GO:0000325: plant-type vacuole	3.23E-04
10	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	3.55E-04
11	GO:0046658: anchored component of plasma membrane	5.42E-04
12	GO:0005576: extracellular region	5.67E-04
13	GO:0009941: chloroplast envelope	6.67E-04
14	GO:0005960: glycine cleavage complex	8.33E-04
15	GO:0010168: ER body	1.72E-03
16	GO:0009507: chloroplast	1.84E-03
17	GO:0016021: integral component of membrane	2.39E-03
18	GO:0009986: cell surface	2.42E-03
19	GO:0042807: central vacuole	2.42E-03
20	GO:0000326: protein storage vacuole	3.21E-03
21	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.63E-03
22	GO:0005618: cell wall	4.08E-03
23	GO:0016020: membrane	4.68E-03
24	GO:0048471: perinuclear region of cytoplasm	4.99E-03
25	GO:0009579: thylakoid	5.35E-03
26	GO:0005753: mitochondrial proton-transporting ATP synthase complex	7.04E-03
27	GO:0030076: light-harvesting complex	7.04E-03
28	GO:0048046: apoplast	1.02E-02
29	GO:0005886: plasma membrane	1.17E-02
30	GO:0009570: chloroplast stroma	1.20E-02
31	GO:0005887: integral component of plasma membrane	1.25E-02
32	GO:0009522: photosystem I	1.39E-02
33	GO:0009705: plant-type vacuole membrane	1.40E-02
34	GO:0009523: photosystem II	1.46E-02
35	GO:0009506: plasmodesma	2.22E-02
36	GO:0009707: chloroplast outer membrane	2.41E-02
37	GO:0031902: late endosome membrane	3.22E-02
38	GO:0005856: cytoskeleton	3.71E-02
39	GO:0009535: chloroplast thylakoid membrane	3.92E-02
40	GO:0005747: mitochondrial respiratory chain complex I	4.86E-02