Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G01070

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015843: methylammonium transport0.00E+00
2GO:0009722: detection of cytokinin stimulus0.00E+00
3GO:0071345: cellular response to cytokine stimulus0.00E+00
4GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
5GO:0010336: gibberellic acid homeostasis0.00E+00
6GO:0006659: phosphatidylserine biosynthetic process6.06E-06
7GO:0015696: ammonium transport4.72E-05
8GO:0009765: photosynthesis, light harvesting6.61E-05
9GO:0072488: ammonium transmembrane transport6.61E-05
10GO:0006021: inositol biosynthetic process6.61E-05
11GO:0016094: polyprenol biosynthetic process8.72E-05
12GO:0019408: dolichol biosynthetic process8.72E-05
13GO:0016120: carotene biosynthetic process8.72E-05
14GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.10E-04
15GO:0009768: photosynthesis, light harvesting in photosystem I5.68E-04
16GO:0006366: transcription from RNA polymerase II promoter6.04E-04
17GO:0016117: carotenoid biosynthetic process7.52E-04
18GO:0042335: cuticle development7.91E-04
19GO:0009791: post-embryonic development9.08E-04
20GO:0008654: phospholipid biosynthetic process9.08E-04
21GO:0009416: response to light stimulus1.16E-03
22GO:0042128: nitrate assimilation1.29E-03
23GO:0048573: photoperiodism, flowering1.34E-03
24GO:0018298: protein-chromophore linkage1.43E-03
25GO:0010218: response to far red light1.52E-03
26GO:0007568: aging1.57E-03
27GO:0010119: regulation of stomatal movement1.57E-03
28GO:0009637: response to blue light1.67E-03
29GO:0010114: response to red light1.98E-03
30GO:0042546: cell wall biogenesis2.03E-03
31GO:0006486: protein glycosylation2.41E-03
32GO:0006857: oligopeptide transport2.52E-03
33GO:0009624: response to nematode3.06E-03
34GO:0006810: transport3.34E-03
35GO:0006633: fatty acid biosynthetic process4.16E-03
36GO:0015979: photosynthesis7.61E-03
37GO:0008152: metabolic process9.75E-03
38GO:0071555: cell wall organization2.25E-02
39GO:0009409: response to cold2.80E-02
40GO:0009793: embryo development ending in seed dormancy4.11E-02
RankGO TermAdjusted P value
1GO:0016719: carotene 7,8-desaturase activity0.00E+00
2GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
3GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
4GO:0004512: inositol-3-phosphate synthase activity1.65E-05
5GO:0001872: (1->3)-beta-D-glucan binding4.72E-05
6GO:0045547: dehydrodolichyl diphosphate synthase activity8.72E-05
7GO:0002094: polyprenyltransferase activity8.72E-05
8GO:0000210: NAD+ diphosphatase activity1.10E-04
9GO:0008519: ammonium transmembrane transporter activity1.10E-04
10GO:0004869: cysteine-type endopeptidase inhibitor activity1.86E-04
11GO:0031409: pigment binding4.98E-04
12GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.98E-04
13GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.98E-04
14GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.98E-04
15GO:0001046: core promoter sequence-specific DNA binding5.33E-04
16GO:0016168: chlorophyll binding1.25E-03
17GO:0030247: polysaccharide binding1.34E-03
18GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.57E-03
19GO:0016746: transferase activity, transferring acyl groups3.12E-03
20GO:0004252: serine-type endopeptidase activity3.82E-03
21GO:0016787: hydrolase activity4.85E-03
22GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.66E-02
23GO:0005215: transporter activity2.42E-02
24GO:0046983: protein dimerization activity2.77E-02
RankGO TermAdjusted P value
1GO:0097708: intracellular vesicle0.00E+00
2GO:0009509: chromoplast3.04E-05
3GO:0030076: light-harvesting complex4.64E-04
4GO:0009522: photosystem I8.70E-04
5GO:0009523: photosystem II9.08E-04
6GO:0010287: plastoglobule3.43E-03
7GO:0046658: anchored component of plasma membrane5.37E-03
8GO:0009506: plasmodesma5.60E-03
9GO:0016020: membrane7.98E-03
10GO:0005618: cell wall8.96E-03
11GO:0009941: chloroplast envelope1.06E-02
12GO:0005887: integral component of plasma membrane1.13E-02
13GO:0009579: thylakoid1.55E-02
14GO:0009534: chloroplast thylakoid1.56E-02
15GO:0005783: endoplasmic reticulum1.59E-02
16GO:0031225: anchored component of membrane1.87E-02
17GO:0009505: plant-type cell wall2.65E-02
18GO:0000139: Golgi membrane2.80E-02
19GO:0016021: integral component of membrane2.95E-02
20GO:0005829: cytosol3.70E-02
21GO:0009535: chloroplast thylakoid membrane4.01E-02
22GO:0009507: chloroplast4.51E-02
Gene type



Gene DE type