co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G00970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0019481: L-alanine catabolic process, by transamination	0.00E+00
4	GO:0071456: cellular response to hypoxia	1.05E-09
5	GO:0010120: camalexin biosynthetic process	6.23E-08
6	GO:0009617: response to bacterium	9.76E-08
7	GO:0042742: defense response to bacterium	5.52E-06
8	GO:0010112: regulation of systemic acquired resistance	8.65E-06
9	GO:0010150: leaf senescence	1.32E-05
10	GO:0009682: induced systemic resistance	1.99E-05
11	GO:0055114: oxidation-reduction process	3.52E-05
12	GO:0009697: salicylic acid biosynthetic process	6.16E-05
13	GO:0006468: protein phosphorylation	7.95E-05
14	GO:0006979: response to oxidative stress	1.88E-04
15	GO:0030091: protein repair	2.09E-04
16	GO:0051245: negative regulation of cellular defense response	2.34E-04
17	GO:1990641: response to iron ion starvation	2.34E-04
18	GO:0009700: indole phytoalexin biosynthetic process	2.34E-04
19	GO:0010230: alternative respiration	2.34E-04
20	GO:1901183: positive regulation of camalexin biosynthetic process	2.34E-04
21	GO:0042759: long-chain fatty acid biosynthetic process	2.34E-04
22	GO:0043069: negative regulation of programmed cell death	4.36E-04
23	GO:0009627: systemic acquired resistance	4.57E-04
24	GO:0052544: defense response by callose deposition in cell wall	5.04E-04
25	GO:0044419: interspecies interaction between organisms	5.20E-04
26	GO:0006101: citrate metabolic process	5.20E-04
27	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.20E-04
28	GO:2000693: positive regulation of seed maturation	5.20E-04
29	GO:0019441: tryptophan catabolic process to kynurenine	5.20E-04
30	GO:0009817: defense response to fungus, incompatible interaction	5.57E-04
31	GO:0008219: cell death	5.57E-04
32	GO:0002213: defense response to insect	5.76E-04
33	GO:0010272: response to silver ion	8.44E-04
34	GO:0048281: inflorescence morphogenesis	8.44E-04
35	GO:0010359: regulation of anion channel activity	8.44E-04
36	GO:0080055: low-affinity nitrate transport	8.44E-04
37	GO:0042542: response to hydrogen peroxide	9.79E-04
38	GO:0007166: cell surface receptor signaling pathway	1.03E-03
39	GO:0048194: Golgi vesicle budding	1.20E-03
40	GO:0009399: nitrogen fixation	1.20E-03
41	GO:0006612: protein targeting to membrane	1.20E-03
42	GO:0046513: ceramide biosynthetic process	1.20E-03
43	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.20E-03
44	GO:0010363: regulation of plant-type hypersensitive response	1.61E-03
45	GO:0080142: regulation of salicylic acid biosynthetic process	1.61E-03
46	GO:0006542: glutamine biosynthetic process	1.61E-03
47	GO:0006952: defense response	1.76E-03
48	GO:0034052: positive regulation of plant-type hypersensitive response	2.05E-03
49	GO:0000304: response to singlet oxygen	2.05E-03
50	GO:0006097: glyoxylate cycle	2.05E-03
51	GO:0048544: recognition of pollen	2.12E-03
52	GO:0009851: auxin biosynthetic process	2.27E-03
53	GO:0010256: endomembrane system organization	2.52E-03
54	GO:1902456: regulation of stomatal opening	2.52E-03
55	GO:0002238: response to molecule of fungal origin	2.52E-03
56	GO:0009759: indole glucosinolate biosynthetic process	2.52E-03
57	GO:0006561: proline biosynthetic process	2.52E-03
58	GO:0050832: defense response to fungus	2.71E-03
59	GO:0010252: auxin homeostasis	2.94E-03
60	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.03E-03
61	GO:1900056: negative regulation of leaf senescence	3.58E-03
62	GO:1902074: response to salt	3.58E-03
63	GO:0009607: response to biotic stimulus	3.71E-03
64	GO:0042128: nitrate assimilation	3.91E-03
65	GO:0009751: response to salicylic acid	4.01E-03
66	GO:0006102: isocitrate metabolic process	4.15E-03
67	GO:0009061: anaerobic respiration	4.15E-03
68	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.15E-03
69	GO:0009808: lignin metabolic process	4.74E-03
70	GO:0010204: defense response signaling pathway, resistance gene-independent	4.74E-03
71	GO:0009407: toxin catabolic process	5.04E-03
72	GO:0007338: single fertilization	5.37E-03
73	GO:0045087: innate immune response	5.79E-03
74	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.03E-03
75	GO:0008202: steroid metabolic process	6.03E-03
76	GO:0006099: tricarboxylic acid cycle	6.05E-03
77	GO:0009870: defense response signaling pathway, resistance gene-dependent	6.71E-03
78	GO:0006032: chitin catabolic process	6.71E-03
79	GO:0009688: abscisic acid biosynthetic process	6.71E-03
80	GO:0006631: fatty acid metabolic process	6.88E-03
81	GO:0009089: lysine biosynthetic process via diaminopimelate	7.43E-03
82	GO:0000272: polysaccharide catabolic process	7.43E-03
83	GO:0051707: response to other organism	7.46E-03
84	GO:0012501: programmed cell death	8.17E-03
85	GO:0015706: nitrate transport	8.17E-03
86	GO:0009636: response to toxic substance	8.39E-03
87	GO:0006855: drug transmembrane transport	8.71E-03
88	GO:0055046: microgametogenesis	8.93E-03
89	GO:0009718: anthocyanin-containing compound biosynthetic process	8.93E-03
90	GO:0010143: cutin biosynthetic process	9.72E-03
91	GO:0002237: response to molecule of bacterial origin	9.72E-03
92	GO:0006813: potassium ion transport	1.01E-02
93	GO:0010053: root epidermal cell differentiation	1.05E-02
94	GO:0042343: indole glucosinolate metabolic process	1.05E-02
95	GO:0070588: calcium ion transmembrane transport	1.05E-02
96	GO:0000162: tryptophan biosynthetic process	1.14E-02
97	GO:0010025: wax biosynthetic process	1.14E-02
98	GO:0044550: secondary metabolite biosynthetic process	1.19E-02
99	GO:0005992: trehalose biosynthetic process	1.22E-02
100	GO:0009863: salicylic acid mediated signaling pathway	1.22E-02
101	GO:0080147: root hair cell development	1.22E-02
102	GO:0009626: plant-type hypersensitive response	1.27E-02
103	GO:0006874: cellular calcium ion homeostasis	1.31E-02
104	GO:0009620: response to fungus	1.31E-02
105	GO:0048278: vesicle docking	1.40E-02
106	GO:0016998: cell wall macromolecule catabolic process	1.40E-02
107	GO:0031348: negative regulation of defense response	1.50E-02
108	GO:0010227: floral organ abscission	1.59E-02
109	GO:0006012: galactose metabolic process	1.59E-02
110	GO:0009625: response to insect	1.59E-02
111	GO:0032259: methylation	1.67E-02
112	GO:0010584: pollen exine formation	1.69E-02
113	GO:0009561: megagametogenesis	1.69E-02
114	GO:0046686: response to cadmium ion	1.86E-02
115	GO:0042631: cellular response to water deprivation	1.89E-02
116	GO:0042391: regulation of membrane potential	1.89E-02
117	GO:0006885: regulation of pH	1.99E-02
118	GO:0042752: regulation of circadian rhythm	2.10E-02
119	GO:0061025: membrane fusion	2.10E-02
120	GO:0006633: fatty acid biosynthetic process	2.27E-02
121	GO:0010193: response to ozone	2.31E-02
122	GO:0009630: gravitropism	2.42E-02
123	GO:0009567: double fertilization forming a zygote and endosperm	2.65E-02
124	GO:0019760: glucosinolate metabolic process	2.65E-02
125	GO:0071805: potassium ion transmembrane transport	2.77E-02
126	GO:0001666: response to hypoxia	3.01E-02
127	GO:0009615: response to virus	3.01E-02
128	GO:0009816: defense response to bacterium, incompatible interaction	3.13E-02
129	GO:0006906: vesicle fusion	3.25E-02
130	GO:0006950: response to stress	3.38E-02
131	GO:0009738: abscisic acid-activated signaling pathway	3.46E-02
132	GO:0009813: flavonoid biosynthetic process	3.76E-02
133	GO:0016310: phosphorylation	3.96E-02
134	GO:0007568: aging	4.03E-02
135	GO:0010119: regulation of stomatal movement	4.03E-02
136	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
137	GO:0080167: response to karrikin	4.76E-02
138	GO:0055085: transmembrane transport	4.82E-02
139	GO:0006887: exocytosis	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0016301: kinase activity	2.02E-08
4	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	3.38E-06
5	GO:0004674: protein serine/threonine kinase activity	8.84E-06
6	GO:0005524: ATP binding	1.04E-05
7	GO:0005516: calmodulin binding	1.23E-05
8	GO:0010279: indole-3-acetic acid amido synthetase activity	3.85E-05
9	GO:0050660: flavin adenine dinucleotide binding	6.21E-05
10	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.24E-04
11	GO:0102391: decanoate--CoA ligase activity	1.24E-04
12	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.37E-04
13	GO:0004467: long-chain fatty acid-CoA ligase activity	1.64E-04
14	GO:0005506: iron ion binding	1.76E-04
15	GO:0009055: electron carrier activity	2.18E-04
16	GO:2001227: quercitrin binding	2.34E-04
17	GO:0033984: indole-3-glycerol-phosphate lyase activity	2.34E-04
18	GO:0031957: very long-chain fatty acid-CoA ligase activity	2.34E-04
19	GO:2001147: camalexin binding	2.34E-04
20	GO:0010285: L,L-diaminopimelate aminotransferase activity	2.34E-04
21	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.34E-04
22	GO:0004713: protein tyrosine kinase activity	4.36E-04
23	GO:0050291: sphingosine N-acyltransferase activity	5.20E-04
24	GO:0003994: aconitate hydratase activity	5.20E-04
25	GO:0032934: sterol binding	5.20E-04
26	GO:0004061: arylformamidase activity	5.20E-04
27	GO:0080054: low-affinity nitrate transmembrane transporter activity	8.44E-04
28	GO:0004383: guanylate cyclase activity	8.44E-04
29	GO:0016595: glutamate binding	8.44E-04
30	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.20E-03
31	GO:0019825: oxygen binding	1.26E-03
32	GO:0004834: tryptophan synthase activity	1.61E-03
33	GO:0004031: aldehyde oxidase activity	1.61E-03
34	GO:0050302: indole-3-acetaldehyde oxidase activity	1.61E-03
35	GO:0004356: glutamate-ammonia ligase activity	2.05E-03
36	GO:0045431: flavonol synthase activity	2.05E-03
37	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.03E-03
38	GO:0004012: phospholipid-translocating ATPase activity	3.03E-03
39	GO:0004602: glutathione peroxidase activity	3.03E-03
40	GO:0004656: procollagen-proline 4-dioxygenase activity	3.03E-03
41	GO:0043295: glutathione binding	3.58E-03
42	GO:0005085: guanyl-nucleotide exchange factor activity	3.58E-03
43	GO:0004683: calmodulin-dependent protein kinase activity	4.13E-03
44	GO:0030247: polysaccharide binding	4.13E-03
45	GO:0004034: aldose 1-epimerase activity	4.15E-03
46	GO:0004033: aldo-keto reductase (NADP) activity	4.15E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.28E-03
48	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.35E-03
49	GO:0008142: oxysterol binding	4.74E-03
50	GO:0015238: drug transmembrane transporter activity	4.80E-03
51	GO:0071949: FAD binding	5.37E-03
52	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.79E-03
53	GO:0004743: pyruvate kinase activity	6.03E-03
54	GO:0030955: potassium ion binding	6.03E-03
55	GO:0020037: heme binding	6.21E-03
56	GO:0004568: chitinase activity	6.71E-03
57	GO:0008171: O-methyltransferase activity	6.71E-03
58	GO:0004364: glutathione transferase activity	7.17E-03
59	GO:0008559: xenobiotic-transporting ATPase activity	7.43E-03
60	GO:0005509: calcium ion binding	7.51E-03
61	GO:0005388: calcium-transporting ATPase activity	8.93E-03
62	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.93E-03
63	GO:0004022: alcohol dehydrogenase (NAD) activity	8.93E-03
64	GO:0030552: cAMP binding	1.05E-02
65	GO:0004867: serine-type endopeptidase inhibitor activity	1.05E-02
66	GO:0030553: cGMP binding	1.05E-02
67	GO:0005217: intracellular ligand-gated ion channel activity	1.05E-02
68	GO:0008061: chitin binding	1.05E-02
69	GO:0004970: ionotropic glutamate receptor activity	1.05E-02
70	GO:0004497: monooxygenase activity	1.07E-02
71	GO:0045735: nutrient reservoir activity	1.19E-02
72	GO:0031418: L-ascorbic acid binding	1.22E-02
73	GO:0005216: ion channel activity	1.31E-02
74	GO:0015079: potassium ion transmembrane transporter activity	1.31E-02
75	GO:0016746: transferase activity, transferring acyl groups	1.48E-02
76	GO:0005507: copper ion binding	1.67E-02
77	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.69E-02
78	GO:0005249: voltage-gated potassium channel activity	1.89E-02
79	GO:0030551: cyclic nucleotide binding	1.89E-02
80	GO:0005451: monovalent cation:proton antiporter activity	1.89E-02
81	GO:0016853: isomerase activity	2.10E-02
82	GO:0015299: solute:proton antiporter activity	2.10E-02
83	GO:0015297: antiporter activity	2.38E-02
84	GO:0015385: sodium:proton antiporter activity	2.54E-02
85	GO:0008483: transaminase activity	2.77E-02
86	GO:0051213: dioxygenase activity	3.01E-02
87	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	3.16E-02
88	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.25E-02
89	GO:0008168: methyltransferase activity	3.71E-02
90	GO:0000287: magnesium ion binding	3.78E-02
91	GO:0030145: manganese ion binding	4.03E-02
92	GO:0050897: cobalt ion binding	4.03E-02
93	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.57E-02
94	GO:0000149: SNARE binding	4.57E-02
95	GO:0008233: peptidase activity	4.68E-02
96	GO:0050661: NADP binding	4.71E-02
97	GO:0051539: 4 iron, 4 sulfur cluster binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.85E-08
2	GO:0016021: integral component of membrane	1.20E-05
3	GO:0005783: endoplasmic reticulum	1.71E-04
4	GO:0045252: oxoglutarate dehydrogenase complex	2.34E-04
5	GO:0032588: trans-Golgi network membrane	2.52E-03
6	GO:0000325: plant-type vacuole	5.28E-03
7	GO:0005618: cell wall	5.36E-03
8	GO:0005829: cytosol	7.77E-03
9	GO:0005770: late endosome	1.99E-02
10	GO:0016020: membrane	3.42E-02
11	GO:0031201: SNARE complex	4.85E-02