Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G00700

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042430: indole-containing compound metabolic process0.00E+00
2GO:0080053: response to phenylalanine0.00E+00
3GO:0002376: immune system process0.00E+00
4GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
5GO:0080052: response to histidine0.00E+00
6GO:0046680: response to DDT0.00E+00
7GO:0046865: terpenoid transport0.00E+00
8GO:0006793: phosphorus metabolic process0.00E+00
9GO:0051238: sequestering of metal ion0.00E+00
10GO:0072722: response to amitrole0.00E+00
11GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
12GO:0010055: atrichoblast differentiation0.00E+00
13GO:0070212: protein poly-ADP-ribosylation0.00E+00
14GO:0043201: response to leucine0.00E+00
15GO:0042742: defense response to bacterium4.02E-11
16GO:0009617: response to bacterium4.69E-09
17GO:0071456: cellular response to hypoxia7.65E-09
18GO:0010200: response to chitin5.57E-08
19GO:0009626: plant-type hypersensitive response7.34E-07
20GO:0006468: protein phosphorylation3.64E-06
21GO:0009627: systemic acquired resistance7.42E-06
22GO:0006536: glutamate metabolic process7.90E-05
23GO:0002237: response to molecule of bacterial origin9.75E-05
24GO:0009751: response to salicylic acid1.48E-04
25GO:0006874: cellular calcium ion homeostasis1.84E-04
26GO:0051707: response to other organism3.45E-04
27GO:0000032: cell wall mannoprotein biosynthetic process3.57E-04
28GO:0032107: regulation of response to nutrient levels3.57E-04
29GO:0060627: regulation of vesicle-mediated transport3.57E-04
30GO:0015760: glucose-6-phosphate transport3.57E-04
31GO:0099132: ATP hydrolysis coupled cation transmembrane transport3.57E-04
32GO:0010421: hydrogen peroxide-mediated programmed cell death3.57E-04
33GO:0006855: drug transmembrane transport4.41E-04
34GO:0010204: defense response signaling pathway, resistance gene-independent4.81E-04
35GO:0010193: response to ozone5.42E-04
36GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.80E-04
37GO:0006952: defense response7.31E-04
38GO:0044419: interspecies interaction between organisms7.77E-04
39GO:0031349: positive regulation of defense response7.77E-04
40GO:0042939: tripeptide transport7.77E-04
41GO:0015712: hexose phosphate transport7.77E-04
42GO:1902000: homogentisate catabolic process7.77E-04
43GO:0051592: response to calcium ion7.77E-04
44GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.77E-04
45GO:0010618: aerenchyma formation7.77E-04
46GO:0009805: coumarin biosynthetic process7.77E-04
47GO:0048569: post-embryonic animal organ development7.77E-04
48GO:0090057: root radial pattern formation7.77E-04
49GO:0009866: induced systemic resistance, ethylene mediated signaling pathway7.77E-04
50GO:0009870: defense response signaling pathway, resistance gene-dependent7.93E-04
51GO:0006032: chitin catabolic process7.93E-04
52GO:0051607: defense response to virus8.05E-04
53GO:0009615: response to virus8.65E-04
54GO:0000272: polysaccharide catabolic process9.13E-04
55GO:0071367: cellular response to brassinosteroid stimulus1.26E-03
56GO:0010581: regulation of starch biosynthetic process1.26E-03
57GO:0034051: negative regulation of plant-type hypersensitive response1.26E-03
58GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.26E-03
59GO:1900140: regulation of seedling development1.26E-03
60GO:0035436: triose phosphate transmembrane transport1.26E-03
61GO:0010351: lithium ion transport1.26E-03
62GO:0009410: response to xenobiotic stimulus1.26E-03
63GO:0010272: response to silver ion1.26E-03
64GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway1.26E-03
65GO:0015692: lead ion transport1.26E-03
66GO:0009072: aromatic amino acid family metabolic process1.26E-03
67GO:0033591: response to L-ascorbic acid1.26E-03
68GO:0015714: phosphoenolpyruvate transport1.26E-03
69GO:0080168: abscisic acid transport1.26E-03
70GO:0009407: toxin catabolic process1.36E-03
71GO:0070588: calcium ion transmembrane transport1.49E-03
72GO:0010104: regulation of ethylene-activated signaling pathway1.81E-03
73GO:0006882: cellular zinc ion homeostasis1.81E-03
74GO:0001676: long-chain fatty acid metabolic process1.81E-03
75GO:0046836: glycolipid transport1.81E-03
76GO:0045017: glycerolipid biosynthetic process1.81E-03
77GO:0009298: GDP-mannose biosynthetic process1.81E-03
78GO:0048194: Golgi vesicle budding1.81E-03
79GO:0070301: cellular response to hydrogen peroxide1.81E-03
80GO:0009863: salicylic acid mediated signaling pathway1.83E-03
81GO:0040008: regulation of growth2.02E-03
82GO:0010150: leaf senescence2.16E-03
83GO:0016998: cell wall macromolecule catabolic process2.23E-03
84GO:0009744: response to sucrose2.24E-03
85GO:0015713: phosphoglycerate transport2.44E-03
86GO:0042938: dipeptide transport2.44E-03
87GO:0010109: regulation of photosynthesis2.44E-03
88GO:0060548: negative regulation of cell death2.44E-03
89GO:0045727: positive regulation of translation2.44E-03
90GO:1901002: positive regulation of response to salt stress2.44E-03
91GO:0034052: positive regulation of plant-type hypersensitive response3.11E-03
92GO:0045487: gibberellin catabolic process3.11E-03
93GO:0000304: response to singlet oxygen3.11E-03
94GO:0009697: salicylic acid biosynthetic process3.11E-03
95GO:0042391: regulation of membrane potential3.38E-03
96GO:0002238: response to molecule of fungal origin3.85E-03
97GO:0009643: photosynthetic acclimation3.85E-03
98GO:0050665: hydrogen peroxide biosynthetic process3.85E-03
99GO:0010942: positive regulation of cell death3.85E-03
100GO:0006121: mitochondrial electron transport, succinate to ubiquinone3.85E-03
101GO:0015691: cadmium ion transport3.85E-03
102GO:0010256: endomembrane system organization3.85E-03
103GO:0060918: auxin transport3.85E-03
104GO:0009749: response to glucose4.20E-03
105GO:0002229: defense response to oomycetes4.50E-03
106GO:0009554: megasporogenesis4.64E-03
107GO:0009854: oxidative photosynthetic carbon pathway4.64E-03
108GO:0010555: response to mannitol4.64E-03
109GO:0010310: regulation of hydrogen peroxide metabolic process4.64E-03
110GO:2000067: regulation of root morphogenesis4.64E-03
111GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.64E-03
112GO:0009624: response to nematode5.14E-03
113GO:0030026: cellular manganese ion homeostasis5.48E-03
114GO:1900057: positive regulation of leaf senescence5.48E-03
115GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.48E-03
116GO:0050829: defense response to Gram-negative bacterium5.48E-03
117GO:0009395: phospholipid catabolic process5.48E-03
118GO:0009737: response to abscisic acid5.48E-03
119GO:0043090: amino acid import5.48E-03
120GO:0080167: response to karrikin5.85E-03
121GO:0009787: regulation of abscisic acid-activated signaling pathway6.37E-03
122GO:0043068: positive regulation of programmed cell death6.37E-03
123GO:0019375: galactolipid biosynthetic process6.37E-03
124GO:2000070: regulation of response to water deprivation6.37E-03
125GO:0030091: protein repair6.37E-03
126GO:0007186: G-protein coupled receptor signaling pathway7.30E-03
127GO:0010262: somatic embryogenesis7.30E-03
128GO:0010497: plasmodesmata-mediated intercellular transport7.30E-03
129GO:0030968: endoplasmic reticulum unfolded protein response7.30E-03
130GO:0009699: phenylpropanoid biosynthetic process7.30E-03
131GO:0022900: electron transport chain7.30E-03
132GO:0001558: regulation of cell growth7.30E-03
133GO:0016311: dephosphorylation8.09E-03
134GO:0010112: regulation of systemic acquired resistance8.29E-03
135GO:0051865: protein autoubiquitination8.29E-03
136GO:0008219: cell death8.51E-03
137GO:2000280: regulation of root development9.31E-03
138GO:0010043: response to zinc ion9.85E-03
139GO:0007568: aging9.85E-03
140GO:0048527: lateral root development9.85E-03
141GO:0007064: mitotic sister chromatid cohesion1.04E-02
142GO:0006995: cellular response to nitrogen starvation1.04E-02
143GO:0009688: abscisic acid biosynthetic process1.04E-02
144GO:0010162: seed dormancy process1.04E-02
145GO:0055062: phosphate ion homeostasis1.04E-02
146GO:0055085: transmembrane transport1.14E-02
147GO:0009089: lysine biosynthetic process via diaminopimelate1.15E-02
148GO:0009750: response to fructose1.15E-02
149GO:0006816: calcium ion transport1.15E-02
150GO:0015706: nitrate transport1.27E-02
151GO:0002213: defense response to insect1.27E-02
152GO:0016024: CDP-diacylglycerol biosynthetic process1.27E-02
153GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.27E-02
154GO:0006790: sulfur compound metabolic process1.27E-02
155GO:0012501: programmed cell death1.27E-02
156GO:0006820: anion transport1.27E-02
157GO:0042542: response to hydrogen peroxide1.34E-02
158GO:0010143: cutin biosynthetic process1.51E-02
159GO:0009636: response to toxic substance1.57E-02
160GO:0010167: response to nitrate1.64E-02
161GO:0019853: L-ascorbic acid biosynthetic process1.64E-02
162GO:0046854: phosphatidylinositol phosphorylation1.64E-02
163GO:0042343: indole glucosinolate metabolic process1.64E-02
164GO:0006812: cation transport1.76E-02
165GO:0051302: regulation of cell division2.04E-02
166GO:0098542: defense response to other organism2.18E-02
167GO:0031348: negative regulation of defense response2.33E-02
168GO:0019748: secondary metabolic process2.33E-02
169GO:0009814: defense response, incompatible interaction2.33E-02
170GO:0009620: response to fungus2.46E-02
171GO:0071215: cellular response to abscisic acid stimulus2.48E-02
172GO:0009686: gibberellin biosynthetic process2.48E-02
173GO:0009411: response to UV2.48E-02
174GO:0071369: cellular response to ethylene stimulus2.48E-02
175GO:0006012: galactose metabolic process2.48E-02
176GO:0006979: response to oxidative stress2.56E-02
177GO:0009611: response to wounding2.58E-02
178GO:0010091: trichome branching2.63E-02
179GO:0006817: phosphate ion transport2.63E-02
180GO:0050832: defense response to fungus2.87E-02
181GO:0009958: positive gravitropism3.11E-02
182GO:0006885: regulation of pH3.11E-02
183GO:0006814: sodium ion transport3.27E-02
184GO:0009646: response to absence of light3.27E-02
185GO:0010183: pollen tube guidance3.44E-02
186GO:0006623: protein targeting to vacuole3.44E-02
187GO:0007165: signal transduction3.49E-02
188GO:0000302: response to reactive oxygen species3.61E-02
189GO:0006635: fatty acid beta-oxidation3.61E-02
190GO:0009408: response to heat3.83E-02
191GO:0030163: protein catabolic process3.96E-02
192GO:0009639: response to red or far red light4.14E-02
193GO:0010252: auxin homeostasis4.14E-02
194GO:0009409: response to cold4.17E-02
195GO:0009753: response to jasmonic acid4.18E-02
196GO:0016036: cellular response to phosphate starvation4.32E-02
197GO:0006904: vesicle docking involved in exocytosis4.32E-02
198GO:0055114: oxidation-reduction process4.46E-02
199GO:0001666: response to hypoxia4.69E-02
200GO:0009816: defense response to bacterium, incompatible interaction4.88E-02
RankGO TermAdjusted P value
1GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:1990837: sequence-specific double-stranded DNA binding0.00E+00
4GO:0005524: ATP binding2.95E-05
5GO:0004351: glutamate decarboxylase activity4.45E-05
6GO:0016301: kinase activity4.88E-05
7GO:0004674: protein serine/threonine kinase activity5.54E-05
8GO:0005388: calcium-transporting ATPase activity8.09E-05
9GO:0004190: aspartic-type endopeptidase activity1.16E-04
10GO:0047631: ADP-ribose diphosphatase activity1.23E-04
11GO:0000210: NAD+ diphosphatase activity1.78E-04
12GO:0004476: mannose-6-phosphate isomerase activity3.57E-04
13GO:0010285: L,L-diaminopimelate aminotransferase activity3.57E-04
14GO:0080042: ADP-glucose pyrophosphohydrolase activity3.57E-04
15GO:0005516: calmodulin binding4.39E-04
16GO:0042626: ATPase activity, coupled to transmembrane movement of substances6.72E-04
17GO:0004338: glucan exo-1,3-beta-glucosidase activity7.77E-04
18GO:0042937: tripeptide transporter activity7.77E-04
19GO:0004566: beta-glucuronidase activity7.77E-04
20GO:0045543: gibberellin 2-beta-dioxygenase activity7.77E-04
21GO:0080041: ADP-ribose pyrophosphohydrolase activity7.77E-04
22GO:0015152: glucose-6-phosphate transmembrane transporter activity7.77E-04
23GO:0017110: nucleoside-diphosphatase activity7.77E-04
24GO:0004568: chitinase activity7.93E-04
25GO:0008559: xenobiotic-transporting ATPase activity9.13E-04
26GO:0050660: flavin adenine dinucleotide binding1.22E-03
27GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.26E-03
28GO:0031683: G-protein beta/gamma-subunit complex binding1.26E-03
29GO:0071917: triose-phosphate transmembrane transporter activity1.26E-03
30GO:0001664: G-protein coupled receptor binding1.26E-03
31GO:0015238: drug transmembrane transporter activity1.28E-03
32GO:0030145: manganese ion binding1.44E-03
33GO:0008061: chitin binding1.49E-03
34GO:0004970: ionotropic glutamate receptor activity1.49E-03
35GO:0005217: intracellular ligand-gated ion channel activity1.49E-03
36GO:0030552: cAMP binding1.49E-03
37GO:0030553: cGMP binding1.49E-03
38GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.81E-03
39GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.81E-03
40GO:0017089: glycolipid transporter activity1.81E-03
41GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.81E-03
42GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity1.81E-03
43GO:0035529: NADH pyrophosphatase activity1.81E-03
44GO:0015297: antiporter activity2.02E-03
45GO:0005216: ion channel activity2.03E-03
46GO:0004364: glutathione transferase activity2.13E-03
47GO:0003995: acyl-CoA dehydrogenase activity2.44E-03
48GO:0010279: indole-3-acetic acid amido synthetase activity2.44E-03
49GO:0009916: alternative oxidase activity2.44E-03
50GO:0008891: glycolate oxidase activity2.44E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity2.44E-03
52GO:0015368: calcium:cation antiporter activity2.44E-03
53GO:0042936: dipeptide transporter activity2.44E-03
54GO:0051861: glycolipid binding2.44E-03
55GO:0015369: calcium:proton antiporter activity2.44E-03
56GO:0004499: N,N-dimethylaniline monooxygenase activity2.89E-03
57GO:0000104: succinate dehydrogenase activity3.11E-03
58GO:0003997: acyl-CoA oxidase activity3.11E-03
59GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity3.11E-03
60GO:0043565: sequence-specific DNA binding3.34E-03
61GO:0005249: voltage-gated potassium channel activity3.38E-03
62GO:0030551: cyclic nucleotide binding3.38E-03
63GO:0016298: lipase activity3.43E-03
64GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.85E-03
65GO:0004866: endopeptidase inhibitor activity3.85E-03
66GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.85E-03
67GO:0030246: carbohydrate binding3.89E-03
68GO:0045735: nutrient reservoir activity4.06E-03
69GO:0004012: phospholipid-translocating ATPase activity4.64E-03
70GO:0004144: diacylglycerol O-acyltransferase activity4.64E-03
71GO:0003978: UDP-glucose 4-epimerase activity4.64E-03
72GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.64E-03
73GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.64E-03
74GO:0015491: cation:cation antiporter activity6.37E-03
75GO:0004714: transmembrane receptor protein tyrosine kinase activity6.37E-03
76GO:0015288: porin activity6.37E-03
77GO:0004672: protein kinase activity6.54E-03
78GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity7.30E-03
79GO:0004630: phospholipase D activity7.30E-03
80GO:0008308: voltage-gated anion channel activity7.30E-03
81GO:0030247: polysaccharide binding7.67E-03
82GO:0030170: pyridoxal phosphate binding7.83E-03
83GO:0004871: signal transducer activity8.26E-03
84GO:0015112: nitrate transmembrane transporter activity9.31E-03
85GO:0016614: oxidoreductase activity, acting on CH-OH group of donors9.85E-03
86GO:0005215: transporter activity1.05E-02
87GO:0008794: arsenate reductase (glutaredoxin) activity1.15E-02
88GO:0050661: NADP binding1.23E-02
89GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.39E-02
90GO:0004022: alcohol dehydrogenase (NAD) activity1.39E-02
91GO:0005315: inorganic phosphate transmembrane transporter activity1.39E-02
92GO:0005262: calcium channel activity1.39E-02
93GO:0015114: phosphate ion transmembrane transporter activity1.39E-02
94GO:0046872: metal ion binding1.48E-02
95GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.51E-02
96GO:0003712: transcription cofactor activity1.64E-02
97GO:0051287: NAD binding1.69E-02
98GO:0008134: transcription factor binding1.90E-02
99GO:0001046: core promoter sequence-specific DNA binding1.90E-02
100GO:0043531: ADP binding2.02E-02
101GO:0004298: threonine-type endopeptidase activity2.18E-02
102GO:0033612: receptor serine/threonine kinase binding2.18E-02
103GO:0005509: calcium ion binding2.21E-02
104GO:0004497: monooxygenase activity2.36E-02
105GO:0008810: cellulase activity2.48E-02
106GO:0044212: transcription regulatory region DNA binding2.53E-02
107GO:0005451: monovalent cation:proton antiporter activity2.95E-02
108GO:0015299: solute:proton antiporter activity3.27E-02
109GO:0010181: FMN binding3.27E-02
110GO:0015385: sodium:proton antiporter activity3.96E-02
111GO:0016791: phosphatase activity4.14E-02
112GO:0009055: electron carrier activity4.18E-02
113GO:0008483: transaminase activity4.32E-02
114GO:0051213: dioxygenase activity4.69E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane4.79E-08
2GO:0005886: plasma membrane6.60E-06
3GO:0005765: lysosomal membrane9.13E-04
4GO:0000325: plant-type vacuole1.44E-03
5GO:0005741: mitochondrial outer membrane2.23E-03
6GO:0030660: Golgi-associated vesicle membrane2.44E-03
7GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.44E-03
8GO:0005783: endoplasmic reticulum3.61E-03
9GO:0005618: cell wall3.98E-03
10GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)6.37E-03
11GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane6.37E-03
12GO:0046930: pore complex7.30E-03
13GO:0019773: proteasome core complex, alpha-subunit complex7.30E-03
14GO:0031090: organelle membrane8.29E-03
15GO:0005740: mitochondrial envelope1.04E-02
16GO:0005576: extracellular region1.19E-02
17GO:0031012: extracellular matrix1.39E-02
18GO:0046658: anchored component of plasma membrane1.48E-02
19GO:0005887: integral component of plasma membrane1.68E-02
20GO:0048046: apoplast1.88E-02
21GO:0070469: respiratory chain2.04E-02
22GO:0005839: proteasome core complex2.18E-02
23GO:0005770: late endosome3.11E-02
24GO:0009505: plant-type cell wall3.68E-02
25GO:0000145: exocyst3.78E-02
26GO:0071944: cell periphery3.96E-02
27GO:0009705: plant-type vacuole membrane4.63E-02
Gene type



Gene DE type