Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G00370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway0.00E+00
2GO:0006642: triglyceride mobilization0.00E+00
3GO:0019253: reductive pentose-phosphate cycle1.28E-07
4GO:0006431: methionyl-tRNA aminoacylation1.97E-05
5GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.97E-05
6GO:0006695: cholesterol biosynthetic process5.10E-05
7GO:0019563: glycerol catabolic process9.05E-05
8GO:0032504: multicellular organism reproduction9.05E-05
9GO:0010581: regulation of starch biosynthetic process9.05E-05
10GO:0009052: pentose-phosphate shunt, non-oxidative branch1.36E-04
11GO:0033014: tetrapyrrole biosynthetic process1.36E-04
12GO:0016556: mRNA modification1.36E-04
13GO:0015995: chlorophyll biosynthetic process1.66E-04
14GO:0071483: cellular response to blue light1.86E-04
15GO:0015976: carbon utilization1.86E-04
16GO:0016123: xanthophyll biosynthetic process2.40E-04
17GO:0016120: carotene biosynthetic process2.40E-04
18GO:0006401: RNA catabolic process4.19E-04
19GO:0006402: mRNA catabolic process4.84E-04
20GO:0000105: histidine biosynthetic process4.84E-04
21GO:0006096: glycolytic process4.86E-04
22GO:0019430: removal of superoxide radicals5.50E-04
23GO:0071482: cellular response to light stimulus5.50E-04
24GO:0033384: geranyl diphosphate biosynthetic process6.19E-04
25GO:0006783: heme biosynthetic process6.19E-04
26GO:0009051: pentose-phosphate shunt, oxidative branch6.19E-04
27GO:0045337: farnesyl diphosphate biosynthetic process6.19E-04
28GO:0006779: porphyrin-containing compound biosynthetic process6.90E-04
29GO:0010380: regulation of chlorophyll biosynthetic process6.90E-04
30GO:0031425: chloroplast RNA processing6.90E-04
31GO:0043085: positive regulation of catalytic activity8.37E-04
32GO:0006352: DNA-templated transcription, initiation8.37E-04
33GO:0006006: glucose metabolic process9.90E-04
34GO:0006094: gluconeogenesis9.90E-04
35GO:0010020: chloroplast fission1.07E-03
36GO:0090351: seedling development1.15E-03
37GO:0000162: tryptophan biosynthetic process1.23E-03
38GO:0008299: isoprenoid biosynthetic process1.41E-03
39GO:0006418: tRNA aminoacylation for protein translation1.41E-03
40GO:0080022: primary root development1.98E-03
41GO:0008033: tRNA processing1.98E-03
42GO:0071805: potassium ion transmembrane transport2.84E-03
43GO:0048481: plant ovule development3.68E-03
44GO:0009744: response to sucrose5.13E-03
45GO:0006364: rRNA processing6.31E-03
46GO:0006813: potassium ion transport6.31E-03
47GO:0042744: hydrogen peroxide catabolic process1.03E-02
48GO:0016036: cellular response to phosphate starvation1.12E-02
49GO:0006470: protein dephosphorylation1.30E-02
50GO:0045944: positive regulation of transcription from RNA polymerase II promoter1.52E-02
51GO:0009658: chloroplast organization1.61E-02
52GO:0045454: cell redox homeostasis2.13E-02
53GO:0009793: embryo development ending in seed dormancy2.21E-02
54GO:0006397: mRNA processing2.55E-02
55GO:0055114: oxidation-reduction process3.27E-02
56GO:0009735: response to cytokinin3.49E-02
57GO:0009416: response to light stimulus3.72E-02
58GO:0045893: positive regulation of transcription, DNA-templated4.11E-02
59GO:0006457: protein folding4.48E-02
RankGO TermAdjusted P value
1GO:0046408: chlorophyll synthetase activity0.00E+00
2GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
3GO:0004825: methionine-tRNA ligase activity1.97E-05
4GO:0004654: polyribonucleotide nucleotidyltransferase activity1.97E-05
5GO:0004807: triose-phosphate isomerase activity1.97E-05
6GO:0004325: ferrochelatase activity1.97E-05
7GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.10E-05
8GO:0004751: ribose-5-phosphate isomerase activity9.05E-05
9GO:0017057: 6-phosphogluconolactonase activity1.36E-04
10GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.36E-04
11GO:0001053: plastid sigma factor activity1.86E-04
12GO:0016987: sigma factor activity1.86E-04
13GO:0004337: geranyltranstransferase activity6.19E-04
14GO:0008047: enzyme activator activity7.62E-04
15GO:0004161: dimethylallyltranstransferase activity8.37E-04
16GO:0004089: carbonate dehydratase activity9.90E-04
17GO:0000175: 3'-5'-exoribonuclease activity9.90E-04
18GO:0004725: protein tyrosine phosphatase activity1.23E-03
19GO:0015079: potassium ion transmembrane transporter activity1.41E-03
20GO:0004812: aminoacyl-tRNA ligase activity1.88E-03
21GO:0050662: coenzyme binding2.18E-03
22GO:0004791: thioredoxin-disulfide reductase activity2.18E-03
23GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.61E-03
24GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding3.55E-03
25GO:0000987: core promoter proximal region sequence-specific DNA binding4.45E-03
26GO:0050661: NADP binding4.72E-03
27GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.71E-03
28GO:0051287: NAD binding5.86E-03
29GO:0003899: DNA-directed 5'-3' RNA polymerase activity6.31E-03
30GO:0016491: oxidoreductase activity1.25E-02
31GO:0016787: hydrolase activity2.05E-02
32GO:0042803: protein homodimerization activity2.20E-02
33GO:0004519: endonuclease activity2.63E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.25E-13
2GO:0009570: chloroplast stroma1.09E-06
3GO:0031969: chloroplast membrane1.62E-04
4GO:0055035: plastid thylakoid membrane2.40E-04
5GO:0009941: chloroplast envelope3.70E-04
6GO:0009535: chloroplast thylakoid membrane6.40E-04
7GO:0009536: plastid1.77E-03
8GO:0010319: stromule2.84E-03
9GO:0000325: plant-type vacuole4.06E-03
10GO:0009579: thylakoid5.62E-03
11GO:0009534: chloroplast thylakoid5.67E-03
12GO:0009706: chloroplast inner membrane8.05E-03
13GO:0009543: chloroplast thylakoid lumen9.42E-03
14GO:0043231: intracellular membrane-bounded organelle2.65E-02
15GO:0005774: vacuolar membrane3.31E-02
16GO:0048046: apoplast3.47E-02
Gene type



Gene DE type