GO Enrichment Analysis of Co-expressed Genes with
AT4G00355
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045022: early endosome to late endosome transport | 0.00E+00 |
| 2 | GO:0045596: negative regulation of cell differentiation | 0.00E+00 |
| 3 | GO:1902000: homogentisate catabolic process | 1.31E-07 |
| 4 | GO:0006572: tyrosine catabolic process | 1.23E-06 |
| 5 | GO:0070534: protein K63-linked ubiquitination | 2.38E-06 |
| 6 | GO:0006301: postreplication repair | 6.25E-06 |
| 7 | GO:0006914: autophagy | 1.13E-05 |
| 8 | GO:0051170: nuclear import | 1.13E-04 |
| 9 | GO:1900459: positive regulation of brassinosteroid mediated signaling pathway | 1.13E-04 |
| 10 | GO:0033523: histone H2B ubiquitination | 1.95E-04 |
| 11 | GO:0045836: positive regulation of meiotic nuclear division | 1.95E-04 |
| 12 | GO:0009072: aromatic amino acid family metabolic process | 1.95E-04 |
| 13 | GO:0007231: osmosensory signaling pathway | 2.85E-04 |
| 14 | GO:0042594: response to starvation | 3.84E-04 |
| 15 | GO:0044804: nucleophagy | 3.84E-04 |
| 16 | GO:0010222: stem vascular tissue pattern formation | 3.84E-04 |
| 17 | GO:0009652: thigmotropism | 3.84E-04 |
| 18 | GO:0010508: positive regulation of autophagy | 3.84E-04 |
| 19 | GO:0000422: mitophagy | 4.88E-04 |
| 20 | GO:0046907: intracellular transport | 4.88E-04 |
| 21 | GO:0045927: positive regulation of growth | 4.88E-04 |
| 22 | GO:0006511: ubiquitin-dependent protein catabolic process | 5.36E-04 |
| 23 | GO:0006970: response to osmotic stress | 5.53E-04 |
| 24 | GO:0006499: N-terminal protein myristoylation | 5.92E-04 |
| 25 | GO:0000045: autophagosome assembly | 5.98E-04 |
| 26 | GO:0006559: L-phenylalanine catabolic process | 5.98E-04 |
| 27 | GO:0006333: chromatin assembly or disassembly | 8.33E-04 |
| 28 | GO:0009610: response to symbiotic fungus | 8.33E-04 |
| 29 | GO:0008272: sulfate transport | 8.33E-04 |
| 30 | GO:0016559: peroxisome fission | 9.57E-04 |
| 31 | GO:0008202: steroid metabolic process | 1.36E-03 |
| 32 | GO:0009970: cellular response to sulfate starvation | 1.51E-03 |
| 33 | GO:0000266: mitochondrial fission | 1.81E-03 |
| 34 | GO:0010039: response to iron ion | 2.31E-03 |
| 35 | GO:0007033: vacuole organization | 2.31E-03 |
| 36 | GO:0010053: root epidermal cell differentiation | 2.31E-03 |
| 37 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.67E-03 |
| 38 | GO:0010150: leaf senescence | 2.74E-03 |
| 39 | GO:0051321: meiotic cell cycle | 3.04E-03 |
| 40 | GO:0003333: amino acid transmembrane transport | 3.04E-03 |
| 41 | GO:0006470: protein dephosphorylation | 3.12E-03 |
| 42 | GO:0007005: mitochondrion organization | 3.23E-03 |
| 43 | GO:0009294: DNA mediated transformation | 3.43E-03 |
| 44 | GO:0042631: cellular response to water deprivation | 4.04E-03 |
| 45 | GO:0071472: cellular response to salt stress | 4.25E-03 |
| 46 | GO:0006623: protein targeting to vacuole | 4.68E-03 |
| 47 | GO:0016032: viral process | 5.13E-03 |
| 48 | GO:0007264: small GTPase mediated signal transduction | 5.13E-03 |
| 49 | GO:0006464: cellular protein modification process | 5.60E-03 |
| 50 | GO:0006906: vesicle fusion | 6.82E-03 |
| 51 | GO:0006950: response to stress | 7.08E-03 |
| 52 | GO:0015031: protein transport | 7.21E-03 |
| 53 | GO:0008219: cell death | 7.60E-03 |
| 54 | GO:0009910: negative regulation of flower development | 8.41E-03 |
| 55 | GO:0046686: response to cadmium ion | 9.34E-03 |
| 56 | GO:0006887: exocytosis | 1.01E-02 |
| 57 | GO:0006897: endocytosis | 1.01E-02 |
| 58 | GO:0000209: protein polyubiquitination | 1.10E-02 |
| 59 | GO:0009965: leaf morphogenesis | 1.16E-02 |
| 60 | GO:0009742: brassinosteroid mediated signaling pathway | 1.77E-02 |
| 61 | GO:0016567: protein ubiquitination | 2.18E-02 |
| 62 | GO:0055114: oxidation-reduction process | 2.44E-02 |
| 63 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.59E-02 |
| 64 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.71E-02 |
| 65 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 66 | GO:0006979: response to oxidative stress | 2.80E-02 |
| 67 | GO:0016192: vesicle-mediated transport | 4.13E-02 |
| 68 | GO:0045454: cell redox homeostasis | 4.52E-02 |
| 69 | GO:0006869: lipid transport | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051019: mitogen-activated protein kinase binding | 0.00E+00 |
| 2 | GO:0004411: homogentisate 1,2-dioxygenase activity | 0.00E+00 |
| 3 | GO:0018580: nitronate monooxygenase activity | 0.00E+00 |
| 4 | GO:0004334: fumarylacetoacetase activity | 0.00E+00 |
| 5 | GO:0019707: protein-cysteine S-acyltransferase activity | 4.60E-05 |
| 6 | GO:0031625: ubiquitin protein ligase binding | 9.40E-05 |
| 7 | GO:0004557: alpha-galactosidase activity | 1.95E-04 |
| 8 | GO:0030527: structural constituent of chromatin | 2.85E-04 |
| 9 | GO:0004842: ubiquitin-protein transferase activity | 2.95E-04 |
| 10 | GO:0019776: Atg8 ligase activity | 3.84E-04 |
| 11 | GO:0016004: phospholipase activator activity | 3.84E-04 |
| 12 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 5.98E-04 |
| 13 | GO:0061630: ubiquitin protein ligase activity | 7.03E-04 |
| 14 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 7.13E-04 |
| 15 | GO:0008142: oxysterol binding | 1.09E-03 |
| 16 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.22E-03 |
| 17 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.36E-03 |
| 18 | GO:0015174: basic amino acid transmembrane transporter activity | 1.36E-03 |
| 19 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.66E-03 |
| 20 | GO:0004725: protein tyrosine phosphatase activity | 2.49E-03 |
| 21 | GO:0003682: chromatin binding | 4.45E-03 |
| 22 | GO:0051213: dioxygenase activity | 6.32E-03 |
| 23 | GO:0003746: translation elongation factor activity | 8.96E-03 |
| 24 | GO:0000149: SNARE binding | 9.53E-03 |
| 25 | GO:0005484: SNAP receptor activity | 1.07E-02 |
| 26 | GO:0043621: protein self-association | 1.13E-02 |
| 27 | GO:0035091: phosphatidylinositol binding | 1.13E-02 |
| 28 | GO:0005515: protein binding | 1.17E-02 |
| 29 | GO:0008234: cysteine-type peptidase activity | 1.42E-02 |
| 30 | GO:0015171: amino acid transmembrane transporter activity | 1.42E-02 |
| 31 | GO:0015035: protein disulfide oxidoreductase activity | 1.73E-02 |
| 32 | GO:0005525: GTP binding | 2.25E-02 |
| 33 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 34 | GO:0008017: microtubule binding | 2.59E-02 |
| 35 | GO:0003824: catalytic activity | 3.04E-02 |
| 36 | GO:0016491: oxidoreductase activity | 3.65E-02 |
| 37 | GO:0004722: protein serine/threonine phosphatase activity | 4.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010009: cytoplasmic side of endosome membrane | 0.00E+00 |
| 2 | GO:0000153: cytoplasmic ubiquitin ligase complex | 0.00E+00 |
| 3 | GO:0031372: UBC13-MMS2 complex | 2.38E-06 |
| 4 | GO:0031901: early endosome membrane | 2.71E-05 |
| 5 | GO:0005829: cytosol | 2.51E-04 |
| 6 | GO:0000323: lytic vacuole | 2.85E-04 |
| 7 | GO:0032586: protein storage vacuole membrane | 3.84E-04 |
| 8 | GO:0005768: endosome | 8.35E-04 |
| 9 | GO:0000421: autophagosome membrane | 9.57E-04 |
| 10 | GO:0000326: protein storage vacuole | 1.09E-03 |
| 11 | GO:0034045: pre-autophagosomal structure membrane | 1.09E-03 |
| 12 | GO:0005769: early endosome | 2.49E-03 |
| 13 | GO:0005741: mitochondrial outer membrane | 3.04E-03 |
| 14 | GO:0031410: cytoplasmic vesicle | 3.23E-03 |
| 15 | GO:0005737: cytoplasm | 3.71E-03 |
| 16 | GO:0000785: chromatin | 5.13E-03 |
| 17 | GO:0005778: peroxisomal membrane | 5.84E-03 |
| 18 | GO:0005794: Golgi apparatus | 8.74E-03 |
| 19 | GO:0031201: SNARE complex | 1.01E-02 |
| 20 | GO:0005802: trans-Golgi network | 2.19E-02 |
| 21 | GO:0005759: mitochondrial matrix | 2.34E-02 |
| 22 | GO:0005874: microtubule | 3.88E-02 |
| 23 | GO:0031969: chloroplast membrane | 3.98E-02 |
| 24 | GO:0005773: vacuole | 4.35E-02 |