Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G00040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000042: protein targeting to Golgi0.00E+00
2GO:0043631: RNA polyadenylation1.33E-05
3GO:0006491: N-glycan processing1.54E-04
4GO:0048193: Golgi vesicle transport1.78E-04
5GO:0008202: steroid metabolic process2.27E-04
6GO:0006378: mRNA polyadenylation2.79E-04
7GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process3.33E-04
8GO:0006487: protein N-linked glycosylation4.48E-04
9GO:0016226: iron-sulfur cluster assembly5.39E-04
10GO:0007131: reciprocal meiotic recombination5.39E-04
11GO:0030433: ubiquitin-dependent ERAD pathway5.39E-04
12GO:0042147: retrograde transport, endosome to Golgi6.34E-04
13GO:0000209: protein polyubiquitination1.70E-03
14GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.88E-03
15GO:0006486: protein glycosylation2.02E-03
16GO:0006886: intracellular protein transport6.69E-03
17GO:0006869: lipid transport6.98E-03
18GO:0015031: protein transport2.22E-02
19GO:0009793: embryo development ending in seed dormancy3.40E-02
20GO:0016567: protein ubiquitination4.14E-02
RankGO TermAdjusted P value
1GO:0004652: polynucleotide adenylyltransferase activity3.83E-05
2GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity3.83E-05
3GO:0004559: alpha-mannosidase activity1.11E-04
4GO:0008142: oxysterol binding1.78E-04
5GO:0031624: ubiquitin conjugating enzyme binding3.61E-04
6GO:0016779: nucleotidyltransferase activity5.39E-04
7GO:0004712: protein serine/threonine/tyrosine kinase activity1.49E-03
8GO:0022857: transmembrane transporter activity2.46E-03
9GO:0061630: ubiquitin protein ligase activity5.99E-03
10GO:0008289: lipid binding9.55E-03
11GO:0000166: nucleotide binding1.13E-02
12GO:0005509: calcium ion binding1.76E-02
13GO:0004842: ubiquitin-protein transferase activity2.35E-02
RankGO TermAdjusted P value
1GO:0097361: CIA complex0.00E+00
2GO:0030658: transport vesicle membrane3.83E-05
3GO:0000795: synaptonemal complex7.14E-05
4GO:0000151: ubiquitin ligase complex1.20E-03
5GO:0005834: heterotrimeric G-protein complex2.36E-03
6GO:0005623: cell3.03E-03
7GO:0005794: Golgi apparatus5.76E-03
8GO:0005802: trans-Golgi network1.58E-02
9GO:0005622: intracellular1.70E-02
10GO:0005789: endoplasmic reticulum membrane2.53E-02
Gene type



Gene DE type